phastWeb

Upload files

Sequence Alignment File

Do you have a neutral model(.mod) file?

Yes, I have a model(.mod) file.

Neutral Model File

No, select a precomputed model.

100way Vertebrate alignment
27way D. melanogaster alignment
7way Yeast alignment
160way Ebola virus alignment
7way Nematode alignment

No, predict a model for me.

Note: If the user does not have a neutral model and does not select a precomputed model, a model based on whole alignment is predicted because no neutral regions were provided.

Run phyloFit only. New feature!

Note: A model based on the whole alignment is predicted using phyloFit. This option generates the .mod file only.

Home

Run

Learn

Extras

phastWeb

A web interface for producing conservation scores and identifying conserved elements using phastCons and phyloP.

Upload files

Sequence Alignment File

Do you have a neutral model(.mod) file?

Neutral Model File