ID: rheMac3_genscan_chr1.3439_19.5p
GENE: CD46(20)
chr1:163197436-163197785-


Display Libraries
(1)
HEART 		(2)
KIDNEY 		(3)
OTHER 		(2)
TESTES

Sense strand
GAGCCCCGAGGCCCGACCCCACAGCCCGCCGATTGGTCCCAGCCTCCCTCGTGAGTCGACTGACTTCCGCCCCCGGCGCGGTTCAGGCCACGCCCACCTGTTCTGCGGCCCTAGATACTTTATGAGTTGGTGATTGTTGCGTACCATAGCCGGACTCAGAAGGGGCTTCCCTGCTCGGCTGGCTCTCGGTTTCTCTGCTCTCCCTCCGGAAAAATAGCGGCGTCTTCCGCATCGCGCCATGGCTTCTTCCGGCCGCCGCGAGCGTCCCTTTTCTTCCGGTCGGTTTCCTGGGTTGCTTTTGGCTACCCTCGTGTTGCAGCTATCCTCCTTCTCCGGTAGGACCCCGGGGC
.....................................................................................................................((((.(((((((((.((.((.....)).)).)))).))))).))))...........................................................................................................................................................................................
....................................................................................................................117...................................................171.................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553607(SRX182813)
source: Testis. (testes)
....................................................................................................................................................GCCGGACTCAGAAGGGGCT.......................................................................................................................................................................................19116.0016.004.005.003.001.002.001.00--
....................................................................................................................................................GCCGGACTCAGAAGGGG.........................................................................................................................................................................................17115.0015.005.009.00-----1.00
.................................................................................................................................................ATAGCCGGACTCAGAAGG...........................................................................................................................................................................................18112.0012.005.00-4.00-2.00--1.00
......................................................................................................................................................CGGACTCAGAAGGGGCTTCC....................................................................................................................................................................................20110.0010.002.00-3.004.00-1.00--
....................................................................................................................................................GCCGGACTCAGAAGGGGCTT......................................................................................................................................................................................2019.009.001.003.003.00-1.00-1.00-
.................................................................................................................................................ATAGCCGGACTCAGAAGGGG.........................................................................................................................................................................................2018.008.004.00--1.001.002.00--
....................................................................................................................................................GCCGGACTCAGAAGGGGC........................................................................................................................................................................................1818.008.001.005.00-1.00--1.00-
......................................................................................................................................................CGGACTCAGAAGGGGCTT......................................................................................................................................................................................1818.008.00--5.001.001.001.00--
......................................................................................................................................................CGGACTCAGAAGGGGCTTCCCT..................................................................................................................................................................................2217.007.00--4.00-2.001.00--
....................................................................................................................................................GCCGGACTCAGAAGGGGCTTC.....................................................................................................................................................................................2116.006.003.001.00-1.001.00---
......................................................................................................................................................CGGACTCAGAAGGGGCTTC.....................................................................................................................................................................................1915.005.001.001.002.001.00----
......................................................................................................................................................CGGACTCAGAAGGGGC........................................................................................................................................................................................1615.005.002.002.00-1.00----
.................................................................................................................................................ATAGCCGGACTCAGAAGGG..........................................................................................................................................................................................1915.005.003.001.001.00-----
......................................................................................................................................................CGGACTCAGAAGGGGCTTCCCTG.................................................................................................................................................................................2314.004.002.00-1.00--1.00--
.....................................................................................................................................................CCGGACTCAGAAGGGGCT.......................................................................................................................................................................................1814.004.00-1.00-1.001.00--1.00
.................................................................................................................................................ATAGCCGGACTCAGAAG............................................................................................................................................................................................1714.004.003.00--1.00----
......................................................................................................................................................CGGACTCAGAAGGGG.........................................................................................................................................................................................1523.503.501.00-1.001.50----
.........................................................................................................................ATGAGTTGGTGATTGTTGCG.................................................................................................................................................................................................................2013.003.001.00-1.00-1.00---
....................................................................................................................................................GCCGGACTCAGAAGGG..........................................................................................................................................................................................1623.003.000.501.500.500.50----
...................................................................................................................................................AGCCGGACTCAGAAGGGGCT.......................................................................................................................................................................................2012.002.00-2.00------
.....................................................................................................................................................CCGGACTCAGAAGGGGCTTCC....................................................................................................................................................................................2112.002.00--2.00-----
..................................................................................................................................................TAGCCGGACTCAGAAGGGGCT.......................................................................................................................................................................................2112.002.00-1.00--1.00---
....................................................................................................................................................GCCGGACTCAGAAGGGGCTTCC....................................................................................................................................................................................2212.002.001.001.00------
...........................................................................................................................GAGTTGGTGATTGTTGCG.................................................................................................................................................................................................................1812.002.00-1.001.00-----
................................................................................................................................................CATAGCCGGACTCAGAAGGG..........................................................................................................................................................................................2012.002.00----1.001.00--
....................................................................................................................................................GCCGGACTCAGAAGG...........................................................................................................................................................................................1532.002.001.000.330.33----0.33
...............................................................................................................................TGGTGATTGTTGCGTACCATAGC........................................................................................................................................................................................................2311.001.00-1.00------
......................................................................................................................................................CGGACTCAGAAGGGGCTTCCCTGCTCGG............................................................................................................................................................................2811.001.00--1.00-----
........................................................................................................................................................................CCCTGCTCGGCTGGCTCTCGGT................................................................................................................................................................2211.001.001.00-------
.................................................................................................................................................................................GCTGGCTCTCGGTTTCTCTG.........................................................................................................................................................2011.001.00---1.00----
....................................................................................................................................ATTGTTGCGTACCATAGC........................................................................................................................................................................................................1811.001.00------1.00-
....................................................................................................................................ATTGTTGCGTACCATAGCCGGA....................................................................................................................................................................................................2211.001.00--1.00-----
.....................................................................................................................................................CCGGACTCAGAAGGGGCTT......................................................................................................................................................................................1911.001.00----1.00---
......................................................................................................................................................CGGACTCAGAAGGGGCT.......................................................................................................................................................................................1711.001.00------1.00-
...................................................................................................................................................AGCCGGACTCAGAAGGGG.........................................................................................................................................................................................1811.001.00-1.00------
....................................................................................................................................................GCCGGACTCAGAAGGGGCTTCCCTG.................................................................................................................................................................................2511.001.00--1.00-----
............................................................................................................................................GTACCATAGCCGGACTCAGAAGGGG.........................................................................................................................................................................................2511.001.00-1.00------
..................................................................................................................................................TAGCCGGACTCAGAAGGG..........................................................................................................................................................................................1811.001.001.00-------
............................................................................................................................................................................................................................................................................TTTTCTTCCGGTCGG...................................................................1511.001.00-------1.00
.............................................................................................................................GTTGGTGATTGTTGCGTA...............................................................................................................................................................................................................1811.001.00--1.00-----
.......................................................................................................................................................GGACTCAGAAGGGGCT.......................................................................................................................................................................................1611.001.00---1.00----
.................................................................................................................................................ATAGCCGGACTCAGAAGGGGCTTCCCTG.................................................................................................................................................................................2811.001.00---1.00----
....................................................................................................................................................GCCGGACTCAGAAGGGGCTTCCCC..................................................................................................................................................................................241.000.001.00-------
....................................................................................................................................................GCCGGACTCAGAAGGGGCTTCCCT..................................................................................................................................................................................2411.001.001.00-------
................................................................................................................................................CATAGCCGGACTCAGAAGGGGCT.......................................................................................................................................................................................2311.001.001.00-------
..............................................................................................................................TTGGTGATTGTTGCGTACCA............................................................................................................................................................................................................2011.001.001.00-------
..............................................................................................................................................ACCATAGCCGGACTCAGAAGG...........................................................................................................................................................................................2111.001.00----1.00---
.................................................................................................................................GTGATTGTTGCGTAC..............................................................................................................................................................................................................1511.001.00------1.00-
..................................................................................................................................................TAGCCGGACTCAGAAGG...........................................................................................................................................................................................1711.001.001.00-------
............................................................................................................................AGTTGGTGATTGTTGCGTAC..............................................................................................................................................................................................................2011.001.00---1.00----
...........................................................................................................................................................................................................................................................................................................................................TCCGGTAGGACCCCGGGG.1811.001.00--1.00-----
.....................................................................................................................................................CCGGACTCAGAAGGGG.........................................................................................................................................................................................1620.500.50-0.50------
...................................................................................................................................................AGCCGGACTCAGAAGGG..........................................................................................................................................................................................1720.500.50-0.50------
...................................................................................................................................................AGCCGGACTCAGAAGG...........................................................................................................................................................................................1630.330.33--0.33-----

Antisense strand
GAGCCCCGAGGCCCGACCCCACAGCCCGCCGATTGGTCCCAGCCTCCCTCGTGAGTCGACTGACTTCCGCCCCCGGCGCGGTTCAGGCCACGCCCACCTGTTCTGCGGCCCTAGATACTTTATGAGTTGGTGATTGTTGCGTACCATAGCCGGACTCAGAAGGGGCTTCCCTGCTCGGCTGGCTCTCGGTTTCTCTGCTCTCCCTCCGGAAAAATAGCGGCGTCTTCCGCATCGCGCCATGGCTTCTTCCGGCCGCCGCGAGCGTCCCTTTTCTTCCGGTCGGTTTCCTGGGTTGCTTTTGGCTACCCTCGTGTTGCAGCTATCCTCCTTCTCCGGTAGGACCCCGGGGC
.....................................................................................................................((((.(((((((((.((.((.....)).)).)))).))))).))))...........................................................................................................................................................................................
....................................................................................................................117...................................................171.................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553606(SRX182812)
source: Kidney. (Kidney)		SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)		SRR553580(SRX182786)
source: Kidney. (Kidney)		SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)		SRR553579(SRX182785)
source: Heart. (Heart)		SRR553581(SRX182787)
source: Testis. (testes)		SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)		SRR553607(SRX182813)
source: Testis. (testes)
............GCGGGCTGTGGGGTCGG................................................................................................................................................................................................................................................................................................................................. 1711.001.00-----1.00--