dme-mir-307a- Best orthologs

dme-mir-307a	chr2R:5508756-5508843 -	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intron

Legend:

   mature strand at position 5508766-5508788
   star strand at position 5508811-5508831
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2R:5508741-5508858 -		1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droSim1	chr2R:4140609-4140726 -	LASTZ	1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGC
droSec1	super_1:3126041-3126158 -	LASTZ	1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC
droYak2	chr2L:18140631-18140748 -	LASTZ	1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEre2	scaffold_4929:8848869-8848986 +	LASTZ	1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEug1	scf7180000409209:654058-654175 +	LASTZ	4	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droBia1	scf7180000301506:1211778-1211895 +	LASTZ	4	AAGTTAG--CAG-------CC-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droTak1	scf7180000415866:192891-193008 +	LASTZ	4	AAGTTAG--CAT-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEle1	scf7180000491107:1596303-1596420 +	LASTZ	4	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATC
droRho1	scf7180000777217:399444-399561 -	LASTZ	4	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droFic1	scf7180000453858:1204370-1204487 +	LASTZ	4	GGGGCTA--GAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATC
droKik1	scf7180000302476:911423-911540 -	LASTZ	4	GAGTTAG--CCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droAna3	scaffold_13266:12795467-12795585 -	LASTZ	1	AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
droBip1	scf7180000396730:1128124-1128242 +	LASTZ	4	AAGTTAG--CCG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
dp4	chr3:14135687-14135806 -	LASTZ	1	AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droPer1	super_4:1183061-1183180 +	LASTZ	1	AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droWil1	scaffold_180701:3433650-3433765 -	LASTZ	1	---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGT
droVir3	scaffold_12875:5789441-5789560 -	LASTZ	1	AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGC
droMoj3	scaffold_6496:24271667-24271782 +	LASTZ	1	AAACTA----AG-------AA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droGri2	scaffold_15112:722942-723066 -	LASTZ	1	AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droSim1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGC
droSec1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC
droYak2	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEre2	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEug1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droBia1	AAGTTAG--CAG-------CC-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droTak1	AAGTTAG--CAT-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droEle1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATC
droRho1	AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droFic1	GGGGCTA--GAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATC
droKik1	GAGTTAG--CCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
droAna3	AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
droBip1	AAGTTAG--CCG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
dp4	AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droPer1	AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droWil1	---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGT
droVir3	AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGC
droMoj3	AAACTA----AG-------AA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
droGri2	AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGC	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1699.50	0.00	1673.50	17.50	8.50
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	891.50	25.00	855.50	6.50	4.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	199.50	0.00	194.50	3.50	1.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	165.50	0.50	162.00	2.00	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	164.50	20.50	141.50	1.50	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	108.00	40.50	60.00	1.50	6.00
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	100.00	0.00	96.50	3.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	70.50	5.50	61.50	1.50	2.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	62.00	0.00	61.00	0.00	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	37.00	0.00	35.00	0.50	1.50
.....................................ACTCACTCAACCTGGGTGTG........................................................................	20	2	36.50	0.00	36.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	35.50	0.50	30.50	0.50	4.00
......................................................................................ACCTCCTTGAGTGAGCGT.........................	18	2	28.50	0.00	28.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTG..............................	18	2	19.50	0.00	19.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	18.00	0.00	17.00	0.00	1.00
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	17.50	0.00	17.50	0.00	0.00
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	15.00	0.00	15.00	0.00	0.00
..................................................................................CACGACCTCCTTGAGTGAGCG..........................	21	2	14.50	0.00	14.00	0.50	0.00
..................................................................................CACAACCTCCTTGAGGGAGCG..........................	21	2	14.00	0.00	14.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGG.........................	22	2	12.00	0.00	10.50	0.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAC............................	20	2	10.00	0.00	10.00	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	10.00	3.00	6.50	0.00	0.50
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	9.50	0.00	9.00	0.50	0.00
.................................................................................TCACAACCTCCTTGAGTGATCGT.........................	23	2	8.50	0.00	8.00	0.00	0.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAC........................	24	2	8.00	0.00	8.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	8.00	0.00	8.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	7.00	0.50	6.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	6.50	0.00	5.50	0.50	0.50
..................................................................................CACAACCTCCTTGATTGAGCG..........................	21	2	5.50	0.00	4.50	0.00	1.00
....................................GACTCACTCAACCTGGGTGTG........................................................................	21	2	5.50	0.00	5.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGAGAGCG..........................	21	2	5.00	0.00	5.00	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGAT........................	22	2	4.50	1.50	2.50	0.00	0.50
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	4.50	0.00	4.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGCGT.........................	23	2	4.00	0.00	4.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	3.50	0.00	3.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	3.50	0.00	3.50	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	3.50	1.50	2.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGTG..........................	21	2	3.00	0.00	3.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGGGCG..........................	21	2	3.00	0.00	3.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCA..........................	21	2	3.00	0.00	3.00	0.00	0.00
..................................................................................CACAACCCCCTTGAGTGAGCG..........................	21	2	2.50	0.00	2.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCC..........................	21	2	2.50	0.00	2.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	2.50	0.50	2.00	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	2.50	1.00	1.50	0.00	0.00
......................................................................................ACCTCCTTGAGTGAGCGG.........................	18	2	2.50	0.00	2.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATCGG.........................	23	2	2.50	0.00	2.50	0.00	0.00
.....................................ACTCACTCAACCTGGGTG..........................................................................	18	2	2.50	0.00	2.50	0.00	0.00
..................................................................................CACAACCTCCTTTAGTGAGCG..........................	21	2	2.50	0.00	2.50	0.00	0.00
..................................................................................CACAACCTCCTTCAGTGAGCG..........................	21	2	2.50	0.00	2.50	0.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	2.50	0.00	2.50	0.00	0.00
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	2.00	0.00	2.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	2.00	0.00	2.00	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	2.00	0.50	1.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGTTAGCG..........................	21	2	2.00	0.00	1.00	0.00	1.00
.................................................................................TCACAACCTCCTTGAGTCAGCGT.........................	23	2	2.00	0.00	2.00	0.00	0.00
..................................................................................CACAACCTCCTTGGGTGAGCG..........................	21	2	2.00	0.00	2.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	2.00	0.00	2.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	2.00	0.00	2.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGCG..........................	22	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGCGG.........................	23	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATCGA.........................	23	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	1.50	0.00	1.50	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGG.......................................................................	21	2	1.50	0.00	1.50	0.00	0.00
.................................................................................TCACAACCTCCTTCAGTGAG............................	20	2	1.50	0.00	1.50	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGATG.....................................................................	23	2	1.50	0.50	1.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	1.50	0.00	1.50	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGG.........................	21	2	1.50	0.00	1.00	0.00	0.50
..................................................................................CACAACCTCCxTGAGTGAGCG..........................	20	2	1.50	0.00	1.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAC............................	19	2	1.50	0.00	1.50	0.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAC........................	23	2	1.50	0.00	1.50	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGATCGA.........................	21	2	1.50	0.00	1.50	0.00	0.00

droSec1

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	26428.00	252.00	120.00	26056.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	6609.00	639.50	221.50	5748.00
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	2969.00	465.00	816.50	1687.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	2877.50	40.00	8.00	2829.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	1978.50	39.50	6.00	1933.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1178.50	106.50	16.50	1055.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	817.50	51.50	1.50	764.50
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	737.00	114.50	99.00	523.50
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	447.00	0.50	2.50	444.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	352.00	1.00	2.50	348.50
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	247.00	31.00	52.50	163.50
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	173.50	10.50	0.00	163.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	147.00	15.00	2.00	130.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	138.50	0.00	0.50	138.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	101.50	3.00	0.50	98.00
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	81.50	1.50	1.00	79.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	80.00	0.00	1.00	79.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	74.50	13.50	11.50	49.50
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	61.00	1.50	0.00	59.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	56.50	12.00	8.50	36.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	49.00	4.00	1.00	44.00
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	49.00	0.00	0.00	49.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	48.50	0.00	1.00	47.50
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	48.50	1.00	0.00	47.50
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	45.00	7.00	1.00	37.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	41.50	3.50	0.00	38.00
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	41.00	0.00	0.50	40.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	40.00	5.50	7.00	27.50
.................................................................................TCACAACCTCCTTGAGTGAAC...........................	21	2	39.50	0.00	0.00	39.50
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	37.50	1.00	0.00	36.50
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	36.50	0.00	0.00	36.50
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	35.50	0.50	0.50	34.50
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	34.50	0.00	0.00	34.50
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	34.50	0.00	0.50	34.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	33.50	0.50	0.00	33.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	32.50	1.50	0.50	30.50
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	31.50	1.00	0.00	30.50
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	30.00	0.00	0.00	30.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	29.50	0.00	0.00	29.50
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	29.00	0.00	0.00	29.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	28.50	0.50	0.00	28.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	28.00	0.00	0.00	28.00
.................................................................................TCACAGCCTCCTTGAGTGAGCGA.........................	23	2	28.00	1.00	2.50	24.50
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	26.00	0.00	0.00	26.00
................................................................................CTCACAACCTCCTTGAGTGAGC...........................	22	2	25.50	0.00	0.00	25.50
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	25.50	0.50	0.00	25.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	24.50	1.00	0.00	23.50
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	24.00	0.50	0.00	23.50
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	23.00	1.00	0.50	21.50
..................................................................................CACAGCCTCCTTGAGTGAGCGA.........................	22	2	23.00	2.00	0.50	20.50
.................................................................................TCAAAACCTCCTTGAGTGAGC...........................	21	2	22.00	0.00	0.00	22.00
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	22.00	0.00	0.00	22.00
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	22.00	0.00	0.50	21.50
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	21.50	0.50	0.50	20.50
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	20.50	0.50	0.00	20.00
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	20.00	0.00	0.00	20.00
.................................................................................TCACAACCTCCTTGAGTGGGCGA.........................	23	2	20.00	1.50	4.50	14.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	19.50	1.00	0.00	18.50
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	18.50	0.00	0.00	18.50
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	16.00	1.50	0.50	14.00
.................................................................................TCTCAACCTCCTTGAGTGAGC...........................	21	2	16.00	0.00	0.00	16.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	15.50	0.50	0.50	14.50
.................................................................................TTACAACCTCCTTGAGTGAGC...........................	21	2	15.50	0.00	0.50	15.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................	25	2	15.00	2.00	0.50	12.50
.................................................................................TCACAACCACCTTGAGTGAGC...........................	21	2	14.50	0.00	0.00	14.50
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	13.50	0.00	0.00	13.50
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	13.50	0.50	6.00	7.00
.................................................................................TCACxACCTCCTTGAGTGAGC...........................	20	2	13.50	0.00	0.50	13.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	13.00	0.50	0.00	12.50
.................................................................................GCACAACCTCCTTGAGTGAGC...........................	21	2	13.00	0.00	0.00	13.00
.................................................................................TCACAACCTCTTTGAGTGAGC...........................	21	2	12.50	0.00	0.00	12.50
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	12.50	0.50	0.00	12.00
.................................................................................TCATAACCTCCTTGAGTGAGC...........................	21	2	12.00	0.00	0.00	12.00
.................................................................................TCACAAACTCCTTGAGTGAGCG..........................	22	2	11.50	0.00	0.00	11.50
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	11.50	3.00	0.00	8.50
..................................................................................CACAACCTCCTTGAGTGA.............................	18	2	11.50	0.00	0.00	11.50
.................................................................................TCACAACCTCCTTGAATGAGC...........................	21	2	11.50	0.00	0.00	11.50
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	11.50	0.50	2.50	8.50
.................................................................................TCACAACCCCCTTGAGTGAGCG..........................	22	2	11.50	1.50	0.00	10.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	11.50	7.50	1.00	3.00
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	11.00	0.00	0.00	11.00
...................................................................................ACAACCTCCTTGAGTGAGCGAT........................	22	2	11.00	0.50	3.50	7.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	10.50	0.50	0.00	10.00
.................................................................................TCACGACCTCCTTGAGTGAGCG..........................	22	2	10.00	2.00	0.50	7.50
.................................................................................TCACAACTTCCTTGAGTGAGC...........................	21	2	10.00	0.00	0.00	10.00
.................................................................................TCACAACCTTCTTGAGTGAGC...........................	21	2	9.50	0.00	0.00	9.50
.................................................................................TCACAACCTCCTTGAGTAAGCG..........................	22	2	9.00	0.50	0.00	8.50
..................................................................................CACAGCCTCCTTGAGTGAGC...........................	20	2	8.50	0.00	0.00	8.50
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	8.00	0.00	0.00	8.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	8.00	1.50	1.50	5.00
.................................................................................TCACAACATCCTTGAGTGAG............................	20	2	8.00	0.00	0.00	8.00
.................................................................................TCACACCCTCCTTGAGTGAGC...........................	21	2	7.50	0.00	0.00	7.50
...................................................................................ACAGCCTCCTTGAGTGAGCG..........................	20	2	7.50	0.00	0.00	7.50
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	7.00	0.00	0.00	7.00
.................................................................................TCACAACCTCCTTGAGTGACCG..........................	22	2	7.00	1.50	0.00	5.50
.................................................................................TCACAACCTCCTTGAGTGTGCG..........................	22	2	7.00	4.00	0.00	3.00
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	7.00	1.50	0.00	5.50
.................................................................................TCACAACCTCCTTGAGTGAACG..........................	22	2	7.00	0.00	0.50	6.50
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	7.00	0.50	0.00	6.50
..................................................................................CACAACCTCCTTGAGTGAGCGC.........................	22	2	7.00	0.50	0.00	6.50
.................................................................................TCGCAACCTCCTTGAGTGAGCG..........................	22	2	7.00	0.50	0.00	6.50

droYak2

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	8662.50	11.00	2581.00	82.50	5836.50	151.50
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	7605.00	7.50	2242.50	155.00	5166.50	33.50
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	2431.50	37.00	696.50	127.50	1557.50	13.00
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	2307.00	0.00	724.00	14.00	1552.50	16.50
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1598.00	0.50	367.50	26.50	953.50	250.00
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	969.00	0.00	259.50	9.50	689.00	11.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	921.50	5.50	241.00	26.50	634.00	14.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	888.50	0.00	241.00	15.00	598.00	34.50
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	298.50	0.00	36.50	2.00	260.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	264.50	3.50	63.50	8.00	187.50	2.00
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	205.00	0.00	68.50	0.00	136.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	133.00	0.00	38.50	1.00	93.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	121.00	0.00	29.00	1.50	90.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	120.50	0.00	13.00	0.00	107.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	111.00	0.00	12.00	0.50	98.50	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	95.00	0.00	27.50	0.50	59.50	7.50
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	88.50	0.00	20.00	2.50	65.50	0.50
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	88.00	0.50	18.50	4.50	60.00	4.50
.................................................................................TCACAACCTCCTTGCGTGAG............................	20	2	78.50	0.00	8.50	0.00	70.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	78.50	0.00	12.00	1.00	65.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	69.00	1.50	14.00	2.50	42.00	9.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	64.00	0.00	7.50	0.50	56.00	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	58.50	0.00	20.50	0.50	37.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	55.50	0.00	8.50	0.50	46.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	55.50	0.00	12.50	0.00	43.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	50.00	0.00	4.00	0.50	44.50	1.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	46.00	0.00	9.50	0.00	36.50	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	42.50	0.00	9.50	0.00	33.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	41.50	0.00	14.00	0.00	27.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCG............................	20	2	39.00	0.00	3.50	0.00	35.50	0.00
..................................................................................CACAACCTCCTTGCGTGAGCG..........................	21	2	38.00	0.00	3.50	0.00	34.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	35.50	0.50	6.50	3.00	25.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	35.50	0.00	9.50	0.50	25.00	0.50
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	35.00	0.00	7.50	0.00	27.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGT.........................	23	2	33.50	0.00	3.50	0.00	30.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	31.50	0.00	9.50	0.00	21.00	1.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	31.00	0.00	7.00	0.50	23.50	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	31.00	0.00	14.00	0.00	17.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	30.50	0.00	10.50	0.50	19.50	0.00
.................................................................................TCACAACCTCCTTGCGTGCGCG..........................	22	2	30.50	0.00	1.00	0.00	29.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	30.00	0.00	4.00	0.00	26.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	28.00	0.00	6.00	1.50	20.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	26.50	0.00	7.50	0.00	19.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCG..........................	22	2	26.00	0.00	4.00	0.00	22.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGC.........................	22	2	25.50	0.00	1.00	0.50	24.00	0.00
.................................................................................TCACAACCTCCTTGTGTGAGCG..........................	22	2	25.00	0.00	1.50	0.00	23.50	0.00
..................................................................................CACAACCTCCTTGAGTGCGCG..........................	21	2	25.00	0.00	2.50	0.00	22.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGCG..........................	22	2	24.50	0.00	5.50	0.50	18.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	24.00	0.00	1.50	0.00	22.50	0.00
..................................................................................CACAACCTCCTTGCGTGAGCGA.........................	22	2	23.00	0.00	2.00	0.00	21.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	23.00	0.00	3.50	0.00	19.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCGA.........................	23	2	22.00	0.00	2.00	0.00	20.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	21.00	0.00	3.00	0.00	17.00	1.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	20.50	0.00	5.50	0.00	15.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	20.50	0.00	3.00	0.50	17.00	0.00
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	20.50	0.00	1.50	0.00	19.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	20.00	0.00	6.00	0.00	14.00	0.00
.................................................................................TAACAACCTCCTTGAGTGAGCG..........................	22	2	19.50	0.00	2.00	0.00	17.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	19.50	0.00	3.50	0.50	13.00	2.50
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	19.50	0.00	5.50	0.50	13.50	0.00
.................................................................................TCACAACCGCCTTGAGTGAGC...........................	21	2	19.50	0.00	2.50	0.00	17.00	0.00
.................................................................................TCACAACCTCCGTGAGTGAGCG..........................	22	2	19.00	0.00	3.00	0.00	16.00	0.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	19.00	0.00	5.50	0.00	13.50	0.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	19.00	0.00	4.00	0.00	15.00	0.00
.................................................................................TCACAACCTCCTTGAGTGTGCG..........................	22	2	18.50	0.00	1.00	0.00	17.50	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	18.50	0.00	9.50	0.00	9.00	0.00
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	18.50	0.00	5.00	0.00	13.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	18.00	0.00	4.50	0.00	13.50	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	17.50	0.00	5.50	0.00	12.00	0.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	17.50	0.00	3.50	0.00	14.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGCG..........................	22	2	17.50	0.00	2.50	0.00	15.00	0.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	17.00	0.00	6.50	0.00	10.50	0.00
.................................................................................TCACAACCTCCTTGAGTTAGCG..........................	22	2	17.00	0.00	8.50	0.00	8.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	17.00	0.00	2.50	0.00	14.50	0.00
..................................................................................CACAACCTCCTTGCGTGAGC...........................	20	2	17.00	0.00	0.50	0.00	16.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	16.50	0.00	4.50	0.50	11.50	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	16.50	1.50	5.50	0.00	8.00	1.50
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	16.00	0.50	4.00	0.00	11.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCGA.........................	23	2	15.50	0.00	2.50	0.50	12.50	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	15.50	0.00	1.50	0.00	14.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGG............................	20	2	15.50	0.00	2.50	0.00	13.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	15.00	0.00	2.50	0.00	12.50	0.00
.................................................................................TCACAAACTCCTTGAGTGAGCG..........................	22	2	15.00	0.00	4.00	0.00	11.00	0.00
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	14.00	0.00	2.00	0.50	10.00	1.50
.................................................................................CCACAACCTCCTTGAGTGAGCG..........................	22	2	14.00	0.00	3.50	0.50	10.00	0.00
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	14.00	0.00	3.00	0.00	11.00	0.00
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	13.50	0.00	2.50	0.00	11.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGCG..........................	22	2	13.50	0.00	1.00	0.00	12.50	0.00
.................................................................................TCACAACCTCCTTGAGTTAG............................	20	2	13.00	0.00	4.50	0.00	8.50	0.00
.................................................................................TCACAACCTCCCTGAGTGAGCG..........................	22	2	13.00	0.00	4.00	0.00	9.00	0.00
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	13.00	0.00	5.00	0.00	7.00	1.00
.................................................................................TCACAACCTCCTTGAGTGAGTG..........................	22	2	12.50	0.00	2.50	0.00	10.00	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	12.50	0.00	3.00	0.00	9.50	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	12.50	0.00	4.00	0.00	8.00	0.50
.................................................................................TCACCACCTCCTTGAGTGAGC...........................	21	2	12.50	0.00	2.50	0.00	10.00	0.00
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	12.50	0.00	4.50	0.00	7.50	0.50
.................................................................................TCACAACCTCCTTAAGTGAGCG..........................	22	2	12.00	0.00	7.00	0.00	5.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGCG..........................	22	2	12.00	0.00	3.50	0.00	8.50	0.00
.................................................................................TCACAACCTCCTTGAGTGACCG..........................	22	2	11.50	0.00	1.50	0.00	10.00	0.00
.................................................................................TCACAACCTCCTTGAATGAGC...........................	21	2	11.50	0.00	5.50	0.00	6.00	0.00
.................................................................................TCACACCCTCCTTGAGTGAGC...........................	21	2	11.50	0.00	1.00	0.00	10.50	0.00

droEre2

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	38091.00	21.00	3729.00	0.00	34341.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	9461.00	16.50	3586.00	0.00	5858.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	4929.50	0.00	857.00	0.00	4072.50
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	2570.00	33.00	1022.50	0.00	1514.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	2052.50	0.50	280.50	0.00	1771.50
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1663.50	1.50	523.50	0.00	1138.50
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	997.50	6.50	403.50	0.00	587.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	661.50	0.50	159.50	0.00	501.50
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	433.00	0.00	4.00	0.00	429.00
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	407.00	0.00	52.50	0.00	354.50
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	394.00	0.00	7.50	0.00	386.50
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	394.00	0.00	33.50	0.00	360.50
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	342.00	0.50	12.00	0.00	329.50
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	281.00	1.50	122.50	0.00	157.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	251.50	0.00	3.00	0.00	248.50
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	223.00	0.00	2.00	0.00	221.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	217.50	0.50	18.50	0.00	198.50
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	198.00	0.00	16.00	0.00	182.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	178.50	0.00	26.00	0.00	152.50
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	172.00	0.00	1.50	0.00	170.50
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	167.50	0.00	61.00	0.00	106.50
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	127.00	0.00	9.50	0.00	117.50
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	96.50	1.00	30.50	0.00	65.00
.................................................................................TCACAACCTCATTGAGTGAGCG..........................	22	2	92.50	0.00	3.50	0.00	89.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	91.50	0.00	16.50	0.00	75.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	90.00	1.00	85.00	0.00	4.00
.................................................................................TCACAACCTCCTTGAGTTAGCG..........................	22	2	87.00	0.00	8.50	0.00	78.50
.................................................................................TCAAAACCTCCTTGAGTGAGC...........................	21	2	83.50	0.00	0.00	0.00	83.50
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	78.50	0.00	3.00	0.00	75.50
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	73.50	0.50	9.00	0.00	64.00
.................................................................................TCACAACCTCCTTTAGTGAGCG..........................	22	2	66.50	0.00	4.50	0.00	62.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	61.50	0.00	14.50	0.00	47.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	59.50	0.00	7.00	0.00	52.50
.................................................................................TCACAACCTCATTGAGTGAG............................	20	2	58.50	0.00	0.50	0.00	58.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	56.50	0.00	14.50	0.00	42.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	56.00	0.00	17.00	0.00	39.00
.................................................................................TCACAACCTCCTTGAGTTAG............................	20	2	55.00	0.00	5.50	0.00	49.50
.................................................................................TAACAACCTCCTTGAGTGAGCG..........................	22	2	51.00	0.00	5.00	0.00	46.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	48.50	0.00	3.50	0.00	45.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	47.00	0.00	11.50	0.00	35.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	46.50	0.00	11.50	0.00	35.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	46.00	0.00	3.50	0.00	42.50
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	46.00	0.50	16.50	0.00	29.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	46.00	0.00	6.50	0.00	39.50
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	44.50	0.00	9.50	0.00	35.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	44.50	0.00	4.50	0.00	40.00
.................................................................................TCACAACCTCCTTTAGTGAG............................	20	2	44.00	0.00	1.50	0.00	42.50
.................................................................................TTACAACCTCCTTGAGTGAGC...........................	21	2	42.50	0.00	2.50	0.00	40.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	42.00	0.00	4.50	0.00	37.50
.................................................................................TCCCAACCTCCTTGAGTGAGC...........................	21	2	41.50	0.00	0.50	0.00	41.00
.................................................................................TCACAACCTACTTGAGTGAGCG..........................	22	2	41.50	0.00	0.50	0.00	41.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	41.00	0.00	10.00	0.00	31.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	41.00	0.00	5.00	0.00	36.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	40.50	0.00	4.50	0.00	36.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	40.50	0.00	4.00	0.00	36.50
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	40.00	0.00	3.50	0.00	36.50
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	39.50	0.00	4.00	0.00	35.50
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	37.50	0.00	2.50	0.00	35.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	36.50	0.50	32.00	0.00	4.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	36.50	0.00	11.00	0.00	25.50
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	35.50	0.00	9.00	0.00	26.50
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	35.00	0.00	2.50	0.00	32.50
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	34.50	0.00	17.00	0.00	17.50
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	34.50	0.00	20.00	0.00	14.50
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	34.00	0.00	21.00	0.00	13.00
.................................................................................TCACAACCTCTTTGAGTGAGC...........................	21	2	33.00	0.00	7.00	0.00	26.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	32.50	0.00	2.00	0.00	30.50
.................................................................................TCACAACCTCCTTGAGTGAGAG..........................	22	2	32.00	0.00	8.50	0.00	23.50
................................................................................CTCACAACCTCCTTGAGTGAGC...........................	22	2	31.50	0.00	3.50	0.00	28.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	31.00	0.00	4.50	0.00	26.50
.................................................................................TAACAACCTCCTTGAGTGAG............................	20	2	29.00	0.00	0.50	0.00	28.50
.................................................................................TCATAACCTCCTTGAGTGAGC...........................	21	2	29.00	0.00	1.00	0.00	28.00
.................................................................................TCACAACCTACTTGAGTGAG............................	20	2	28.50	0.00	0.50	0.00	28.00
.................................................................................TCACAACCTCCTTGAGTTAGCGA.........................	23	2	27.00	0.00	3.50	0.00	23.50
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	26.50	1.00	23.50	0.00	2.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	26.00	0.00	4.50	0.00	21.50
.................................................................................TCTCAACCTCCTTGAGTGAGC...........................	21	2	26.00	0.00	0.50	0.00	25.50
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	25.50	0.00	8.00	0.00	17.50
.................................................................................TCAGAACCTCCTTGAGTGAGC...........................	21	2	25.00	0.00	1.50	0.00	23.50
..................................................................................CACAACCTCATTGAGTGAGC...........................	20	2	25.00	0.00	0.50	0.00	24.50
.................................................................................TCACAACCTCCTTGAGTGAT............................	20	2	24.00	0.00	2.50	0.00	21.50
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	24.00	0.00	4.00	0.00	20.00
.................................................................................TCACAACCTTCTTGAGTGAGC...........................	21	2	23.50	0.00	1.50	0.00	22.00
.................................................................................TCACCACCTCCTTGAGTGAGC...........................	21	2	23.00	0.00	1.50	0.00	21.50
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	22.00	0.00	14.50	0.00	7.50
.................................................................................TCACAACCTCCTTGATTGAGCG..........................	22	2	22.00	0.00	3.50	0.00	18.50
.................................................................................TCACAACATCCTTGAGTGAG............................	20	2	20.50	0.00	0.50	0.00	20.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	20.00	0.00	5.50	0.00	14.50
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	20.00	0.00	1.00	0.00	19.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	20.00	0.00	10.00	0.00	10.00
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	20.00	0.50	4.00	0.00	15.50
..................................................................................CACAACCTCCTTTAGTGAGC...........................	20	2	20.00	0.00	0.00	0.00	20.00
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	19.50	0.00	1.50	0.00	18.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	19.50	0.50	6.50	0.00	12.50
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	19.00	0.00	3.50	0.00	15.50
..................................................................................AACAACCTCCTTGAGTGAGC...........................	20	2	19.00	0.00	1.00	0.00	18.00
.................................................................................TCACxACCTCCTTGAGTGAGC...........................	20	2	19.00	0.00	0.00	0.00	19.00
.................................................................................TCACAACCTCATTGAGTGAGCGA.........................	23	2	18.50	0.00	0.00	0.00	18.50
..................................................................................CACAACCTCCTTGAGTTAGCG..........................	21	2	18.50	0.00	1.00	0.00	17.50
..................................................................................CACAACCTCCTTGAGTTAGC...........................	20	2	18.50	0.00	0.00	0.00	18.50
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	18.50	0.00	0.50	0.00	18.00

droEug1

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC

Size

Hit Count

Total Norm

droBia1

AAGTTAG--CAG-------CC-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC

Size

Hit Count

Total Norm

droTak1

AAGTTAG--CAT-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC

Size

Hit Count

Total Norm

droEle1

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATC

Size

Hit Count

Total Norm

droRho1

AAGTTAG--CAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC

Size

Hit Count

Total Norm

droFic1

GGGGCTA--GAG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATC

Size

Hit Count

Total Norm

droKik1

GAGTTAG--CCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC

Size

Hit Count

Total Norm

droAna3

AAGTTAG--CAG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	58594.00	352.50	52456.00	5779.00	6.50
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	7267.50	766.00	2594.50	3905.00	2.00
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	5531.00	93.50	4046.00	1391.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	3058.50	756.50	739.50	1557.00	5.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	2477.00	78.00	1766.00	633.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1263.00	147.00	397.00	719.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	1066.50	203.50	200.50	661.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	945.00	92.00	566.00	287.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	902.50	2.50	866.00	34.00	0.00
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	650.00	1.50	434.00	214.00	0.50
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	649.50	3.50	622.50	23.50	0.00
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	303.00	0.00	291.00	12.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	298.50	2.50	283.00	13.00	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	286.00	10.00	217.00	59.00	0.00
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	275.00	0.50	266.00	8.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	271.50	31.50	55.50	183.50	1.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	252.00	1.50	221.00	29.50	0.00
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	236.50	3.50	216.00	17.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	193.00	1.00	107.00	85.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	191.00	3.00	157.50	30.50	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	159.00	2.00	98.50	58.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	156.50	0.00	147.00	9.50	0.00
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	150.50	0.00	132.50	18.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	137.00	0.50	74.00	62.00	0.50
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	137.00	11.00	33.50	92.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	133.50	14.50	69.50	49.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	114.00	20.50	33.00	59.50	1.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	95.00	1.50	80.50	13.00	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	91.50	0.00	29.00	62.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	87.00	0.50	75.50	11.00	0.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	85.50	0.00	70.50	15.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	77.50	0.50	62.00	15.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	72.00	0.00	66.00	6.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	72.00	0.50	61.50	10.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	71.00	0.50	51.50	19.00	0.00
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	70.50	1.50	55.50	13.50	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	69.00	4.50	40.50	24.00	0.00
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	65.50	0.00	56.50	9.00	0.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	65.50	0.00	39.00	26.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	65.00	1.50	4.50	59.00	0.00
.................................................................................TTACAACCTCCTTGAGTGAGC...........................	21	2	63.50	1.00	57.50	5.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	62.00	0.50	1.00	60.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGG...........................	21	2	61.50	2.00	57.00	2.50	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	61.00	0.00	31.50	29.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	60.50	8.00	28.00	23.50	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	59.50	11.50	25.00	23.00	0.00
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	58.50	0.50	48.00	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	56.00	1.00	47.50	7.50	0.00
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	55.50	0.00	48.50	7.00	0.00
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	55.00	1.00	44.50	9.50	0.00
.................................................................................TCACAACCTTCTTGAGTGAGC...........................	21	2	54.50	0.00	51.00	3.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAT............................	20	2	53.50	1.00	49.50	3.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	49.00	0.00	21.50	27.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGAG..........................	22	2	48.50	17.50	24.50	6.50	0.00
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	48.50	0.50	22.50	25.50	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	46.00	0.50	16.00	29.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	45.00	3.00	24.50	17.50	0.00
.................................................................................TCATAACCTCCTTGAGTGAGC...........................	21	2	44.00	0.00	40.00	4.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	43.00	7.50	15.50	19.00	1.00
.................................................................................TCACAACCTCCTTGAGTTAG............................	20	2	42.50	0.00	37.50	5.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	41.50	0.00	12.50	29.00	0.00
.................................................................................TCACAACCTCCTTTAGTGATC...........................	21	2	41.00	0.50	40.00	0.50	0.00
.................................................................................TCAAAACCTCCTTGAGTGAGC...........................	21	2	40.00	0.50	26.00	13.50	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	39.00	1.00	22.50	15.50	0.00
.................................................................................TCACAACCTCTTTGAGTGAGC...........................	21	2	37.50	0.00	30.50	7.00	0.00
.................................................................................TCACAACTTCCTTGAGTGAGC...........................	21	2	36.00	0.00	30.00	6.00	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	35.50	0.00	15.50	20.00	0.00
.................................................................................TCACAACCTCCTTGAATGAGC...........................	21	2	35.00	1.00	27.50	6.50	0.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	34.50	1.00	24.00	9.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGCG..........................	22	2	34.50	4.50	14.00	16.00	0.00
..................................................................................CACAACCTCCTTGAGTGATC...........................	20	2	33.50	0.00	31.00	2.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	33.00	5.00	10.00	18.00	0.00
.................................................................................TCACxACCTCCTTGAGTGAGC...........................	20	2	31.00	0.00	31.00	0.00	0.00
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	31.00	0.00	13.00	18.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCG..........................	22	2	31.00	0.50	2.00	28.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	30.00	1.00	1.00	28.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	30.00	0.50	8.50	21.00	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	30.00	0.50	16.50	13.00	0.00
.................................................................................TCACAACCTCCTTTAGTGAG............................	20	2	29.50	0.00	25.50	4.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGC...........................	21	2	29.50	0.50	1.50	27.50	0.00
.................................................................................TCACAACCTACTTGAGTGAG............................	20	2	29.00	0.00	23.50	5.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	29.00	0.00	1.00	28.00	0.00
.................................................................................GCACAACCTCCTTGAGTGAGC...........................	21	2	28.00	0.00	6.00	22.00	0.00
.................................................................................TCACAACCTCATTGAGTGAGCG..........................	22	2	26.00	2.50	13.50	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAAC...........................	21	2	23.50	0.00	20.00	3.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	23.50	0.50	1.00	22.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGCG..........................	22	2	23.50	2.50	13.00	8.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	23.00	0.00	9.00	14.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	22.50	0.50	12.50	9.00	0.50
.................................................................................TCACAACCTCCTTTAGTGAGCG..........................	22	2	21.50	1.00	14.00	6.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	21.50	0.50	12.00	9.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCGA.........................	23	2	21.50	0.50	12.00	9.00	0.00
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	21.50	0.00	19.00	2.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	21.00	0.50	1.00	19.50	0.00
.................................................................................TCACAACCTACTTGAGTGAGCG..........................	22	2	20.50	4.00	12.00	4.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGTG..........................	22	2	20.00	4.50	8.50	7.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAG............................	20	2	20.00	0.00	6.00	14.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	19.50	0.50	4.00	15.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	19.50	2.50	9.50	7.50	0.00
.................................................................................TCACCACCTCCTTGAGTGAGC...........................	21	2	18.50	0.50	10.50	7.50	0.00
.................................................................................TCACAACCGCCTTGAGTGAGCG..........................	22	2	18.50	0.00	0.00	18.50	0.00

droBip1

AAGTTAG--CCG-------CCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC

Size

Hit Count

Total Norm

dp4

AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	7367.00	301.50	31.00	7034.00	0.50
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	7079.00	240.50	62.00	6775.50	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	3033.00	183.50	96.50	2752.50	0.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	2279.50	41.00	2.50	2236.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	730.50	35.50	0.00	695.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	654.50	31.00	0.00	622.50	1.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	574.00	26.00	9.00	539.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	455.50	20.50	1.00	434.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	205.00	7.50	6.50	191.00	0.00
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	164.50	0.00	1.50	163.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	103.50	3.50	0.50	99.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	78.50	0.00	0.00	78.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	70.50	0.50	1.00	69.00	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	64.50	0.00	0.00	64.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	58.00	3.00	2.00	53.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	55.00	0.00	0.50	54.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	49.50	6.50	0.50	42.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	47.00	0.00	1.00	46.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	32.50	1.00	0.50	31.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	31.50	5.00	1.50	24.50	0.50
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	31.50	0.00	1.50	30.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCG..........................	22	2	28.50	0.00	0.50	28.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	25.50	0.00	0.00	25.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	25.50	3.50	0.00	22.00	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	24.50	0.00	0.00	24.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	23.50	0.00	0.00	23.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	23.50	0.00	0.50	22.50	0.50
.................................................................................TCACAACCTCCTTGCGTGAG............................	20	2	23.00	0.00	0.00	23.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	22.00	0.00	1.00	21.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	21.00	0.00	0.00	21.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	20.00	0.00	2.50	17.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	19.50	0.50	0.00	19.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	19.00	0.50	0.00	18.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGCG..........................	22	2	18.00	0.00	0.00	18.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	16.50	0.50	0.00	16.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	16.50	0.00	1.00	15.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAG............................	20	2	16.00	0.00	0.00	16.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	15.50	0.00	0.00	15.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	15.50	1.00	0.00	14.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	15.50	1.50	0.00	14.00	0.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	15.50	0.50	0.00	15.00	0.00
.....................................ACTCACTCAACCTGGGTGTGATG.....................................................................	23	2	14.00	0.50	3.50	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	14.00	0.50	0.00	13.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCGA.........................	23	2	13.50	0.50	0.50	12.50	0.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	13.50	0.50	0.50	12.50	0.00
.................................................................................TCACAACCTCCTTGAGTAAGCG..........................	22	2	13.00	0.50	0.50	12.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	13.00	0.00	0.00	13.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	12.50	0.00	0.00	12.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	12.50	0.00	0.50	12.00	0.00
.................................................................................TCCCAACCTCCTTGAGTGAGCG..........................	22	2	12.00	0.00	0.00	12.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCG............................	20	2	12.00	0.00	0.00	12.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGAG..........................	22	2	12.00	0.00	0.50	11.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	12.00	0.00	0.50	11.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	11.50	0.00	0.00	11.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	11.50	0.00	0.00	11.50	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	11.50	1.00	0.00	10.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGCG..........................	22	2	11.50	0.50	0.00	11.00	0.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	11.00	0.00	0.00	11.00	0.00
.................................................................................TCACAACCTCCGTGAGTGAGCG..........................	22	2	11.00	0.00	0.00	11.00	0.00
.................................................................................CCACAACCTCCTTGAGTGAGCG..........................	22	2	11.00	0.00	0.00	11.00	0.00
.................................................................................TCACGACCTCCTTGAGTGAGCG..........................	22	2	11.00	0.50	0.00	10.50	0.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	11.00	0.00	0.00	11.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	10.50	0.00	0.50	10.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGCG..........................	22	2	10.50	0.50	0.00	10.00	0.00
.................................................................................TCACAACCCCCTTGAGTGAGCG..........................	22	2	10.50	0.00	0.00	10.50	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCGA.........................	23	2	10.50	0.00	0.50	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	10.50	0.00	0.00	10.50	0.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	10.00	0.50	0.50	9.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGCG..........................	22	2	10.00	0.00	0.00	10.00	0.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	10.00	0.00	1.00	9.00	0.00
.................................................................................TCCCAACCTCCTTGAGTGAGC...........................	21	2	10.00	0.00	0.00	10.00	0.00
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	9.50	0.00	0.00	9.50	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	9.50	0.00	0.00	9.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	9.50	0.50	0.00	9.00	0.00
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	9.50	0.50	0.00	9.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	9.50	0.50	0.50	8.50	0.00
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	8.50	0.00	0.50	8.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	8.50	0.50	0.00	8.00	0.00
.................................................................................TCACAACCTCATTGAGTGAGCG..........................	22	2	8.50	0.00	0.00	8.50	0.00
................................................................................CTCACAACCTCCTTGAGTGAGCG..........................	23	2	8.50	0.50	0.00	8.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	8.50	0.00	0.50	8.00	0.00
.................................................................................TAACAACCTCCTTGAGTGAGCG..........................	22	2	8.50	0.00	0.00	8.50	0.00
.................................................................................ACACAACCTCCTTGAGTGAGCG..........................	22	2	8.00	0.50	0.00	7.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGCGA.........................	23	2	8.00	0.00	0.00	8.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	8.00	0.00	0.00	8.00	0.00
.................................................................................TCACAACCTCCTTGAGTGACCG..........................	22	2	8.00	0.00	0.00	8.00	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	8.00	0.00	0.50	7.50	0.00
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCTTTGAGTGAGC...........................	21	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCTTGAGTCAG............................	20	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	7.50	0.50	0.00	7.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGTG..........................	22	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCGTGAGAGAGC...........................	21	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGT.........................	23	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCTCGAGTGAGCG..........................	22	2	7.50	0.00	0.00	7.50	0.00
.................................................................................TCACAACCTCCTTAAGTGAGCG..........................	22	2	7.00	0.00	0.00	7.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	7.00	0.00	0.00	7.00	0.00
.................................................................................TCACAATCTCCTTGAGTGAGCG..........................	22	2	7.00	0.00	0.00	7.00	0.00
.................................................................................TCTCAACCTCCTTGAGTGAGCG..........................	22	2	7.00	0.00	0.00	7.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCAA.........................	23	2	7.00	0.50	0.00	6.50	0.00
..................................................................................CACAACCTCCTTGCGTGAGCG..........................	21	2	7.00	0.00	0.00	7.00	0.00

droPer1

AAGTTCGGGTCG-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	13703.50	233.00	11.50	5964.00	7495.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	11526.50	199.50	21.50	5433.00	5871.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	4927.50	225.50	33.50	2124.50	2543.50	0.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	4035.00	55.50	0.50	1542.50	2436.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	1713.00	59.00	0.00	542.00	1112.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1464.50	29.50	0.50	520.00	912.50	2.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	1136.50	32.50	2.00	482.00	619.50	0.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	974.00	18.50	0.00	282.50	673.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	383.50	10.50	1.00	150.00	221.50	0.50
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	313.50	1.00	0.50	109.00	203.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	165.00	1.00	0.50	66.50	97.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	160.00	0.50	0.00	68.00	91.50	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	159.50	0.00	0.00	42.50	117.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	148.50	0.00	0.00	43.00	105.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	139.00	5.00	0.00	30.00	104.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	135.50	1.00	0.00	59.50	75.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	133.00	4.00	0.50	45.50	83.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	100.50	0.00	0.00	34.50	66.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	85.00	2.00	0.00	21.00	62.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	81.00	4.50	0.00	36.50	39.00	1.00
.................................................................................TCACAACCTCCTTGAGAGAGCG..........................	22	2	68.00	2.00	0.00	19.50	46.50	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	55.50	0.00	0.50	14.00	41.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	54.00	2.00	0.00	24.50	27.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	54.00	2.00	0.00	23.00	29.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	51.00	0.00	0.00	36.00	15.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	50.00	0.50	0.00	19.00	30.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	50.00	0.00	0.00	23.00	27.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	46.50	0.50	0.00	10.50	35.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	45.00	1.00	0.00	13.00	31.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	44.50	0.00	0.00	18.50	26.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	44.00	0.00	0.00	29.00	15.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	43.50	0.00	0.50	8.00	35.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	42.50	1.00	0.00	12.50	29.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAG............................	20	2	41.50	0.00	0.00	18.00	23.50	0.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	40.50	0.00	0.00	15.50	25.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGCG..........................	22	2	39.00	0.00	0.00	3.00	36.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCGA.........................	23	2	39.00	0.50	0.50	10.50	27.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGCG..........................	22	2	39.00	0.00	0.00	7.00	32.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAG............................	20	2	38.00	0.00	0.00	11.50	26.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	37.50	0.00	0.00	15.50	22.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	37.00	0.00	0.00	12.00	25.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	36.00	0.50	0.00	8.00	27.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	35.50	0.00	0.00	4.50	31.00	0.00
.................................................................................TCACAACCTCCTTGAGTGACCG..........................	22	2	35.50	0.00	0.00	10.00	25.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	34.50	0.00	0.00	6.50	28.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	34.50	0.00	0.00	10.50	24.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	34.00	1.50	0.00	13.50	19.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	32.50	0.50	0.00	7.50	24.50	0.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	32.50	0.50	0.00	11.50	20.50	0.00
.................................................................................TCACAACCTCCTTGTGTGAGCG..........................	22	2	32.50	0.00	0.00	6.00	26.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGCG..........................	22	2	31.00	0.00	0.00	4.50	26.50	0.00
.................................................................................TCACAACCGCCTTGAGTGAGC...........................	21	2	30.50	0.00	0.00	5.00	25.50	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	30.00	0.00	0.00	9.50	20.50	0.00
.................................................................................TCACAAACTCCTTGAGTGAGCG..........................	22	2	29.00	0.00	0.00	7.00	22.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	29.00	1.00	0.50	16.00	11.50	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	27.50	0.50	0.00	6.00	21.00	0.00
.................................................................................TCACGACCTCCTTGAGTGAGCG..........................	22	2	26.00	0.00	0.00	9.00	17.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	25.50	0.00	0.00	6.00	19.50	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	25.00	0.50	0.00	7.50	17.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGCG..........................	22	2	24.50	0.50	0.50	7.00	16.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGCG..........................	22	2	24.50	0.00	0.00	6.50	18.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGCG..........................	22	2	23.00	0.00	0.00	7.50	15.50	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	22.50	0.00	0.00	5.50	17.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	22.50	0.00	0.00	8.00	14.50	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	22.00	1.00	0.00	4.00	17.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGAG..........................	22	2	22.00	0.00	0.00	14.50	7.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	22.00	0.00	0.00	6.50	15.50	0.00
.................................................................................CCACAACCTCCTTGAGTGAGCG..........................	22	2	21.50	0.50	0.00	5.00	16.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCGA.........................	23	2	21.00	0.50	0.00	10.00	10.50	0.00
.....................................ACTCACTCAACCTGGGTGTGATG.....................................................................	23	2	20.50	0.00	0.00	8.00	12.50	0.00
.................................................................................TCACAACCTCCTTGACTGAGCG..........................	22	2	20.50	0.00	0.00	6.00	14.50	0.00
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	20.50	0.00	0.00	5.50	15.00	0.00
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	19.50	0.50	0.00	4.50	14.50	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	19.00	0.00	0.00	6.50	12.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	19.00	0.00	0.00	8.00	11.00	0.00
.................................................................................TCACAATCTCCTTGAGTGAGCG..........................	22	2	19.00	0.50	0.00	5.50	13.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAG............................	20	2	18.50	0.50	0.00	6.50	11.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCGA.........................	23	2	18.50	0.00	0.00	6.50	12.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGT.........................	23	2	18.50	0.00	0.00	2.00	16.50	0.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	18.50	0.50	0.00	9.50	8.50	0.00
.................................................................................TCACAACCTCCTTGAGTGTGCG..........................	22	2	18.00	0.00	0.00	4.50	13.50	0.00
.................................................................................TCACACCCTCCTTGAGTGAGCG..........................	22	2	18.00	0.00	0.00	12.00	6.00	0.00
.................................................................................ACACAACCTCCTTGAGTGAGCG..........................	22	2	18.00	0.00	0.00	4.50	13.50	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCGA.........................	23	2	17.50	0.50	0.00	5.00	12.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	17.50	0.00	0.00	6.00	11.50	0.00
.................................................................................TCACAACCTCCTTGAGTTAGCG..........................	22	2	17.50	0.00	0.00	8.50	9.00	0.00
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	17.00	0.00	0.00	5.00	12.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAG............................	20	2	17.00	0.00	0.00	1.00	16.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGCGA.........................	23	2	17.00	0.00	0.00	2.00	15.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	17.00	0.00	0.00	2.50	14.50	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	17.00	0.00	0.00	3.50	13.50	0.00
.................................................................................TCACAACCTCATTGAGTGAGCG..........................	22	2	17.00	0.50	0.00	3.50	13.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	16.50	0.00	0.00	6.00	10.50	0.00
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	16.50	0.50	0.00	2.00	14.00	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	16.50	0.00	0.00	5.00	11.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCG............................	20	2	16.00	0.00	0.00	5.00	11.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAGCG..........................	22	2	16.00	0.50	0.00	8.00	7.50	0.00
.................................................................................TCACAACCTCCTTGAGTCAGCG..........................	22	2	15.50	0.00	0.00	2.50	13.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGTG..........................	22	2	15.50	0.00	0.00	4.50	11.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	15.50	0.00	0.50	6.00	9.00	0.00
.................................................................................TCACAACCCCCTTGAGTGAGCG..........................	22	2	15.50	0.00	0.00	3.50	12.00	0.00

droWil1

---TTAA--CA--------CA-TTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGT	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	45650.50	217.50	241.50	44429.50	762.00
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	3944.00	54.00	25.50	3745.50	119.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	3441.00	391.50	163.00	2725.50	161.00
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	1705.50	223.00	442.00	976.00	64.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	1681.50	16.00	5.00	1625.50	35.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1558.00	47.00	14.00	395.00	1102.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	453.00	3.00	3.00	445.50	1.50
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	392.00	41.00	60.00	241.50	49.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	356.00	21.50	3.00	254.00	77.50
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	246.50	0.50	2.50	243.00	0.50
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	214.00	0.00	1.00	210.50	2.50
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	198.00	2.00	0.00	195.50	0.50
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	167.00	0.00	0.00	167.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	146.00	0.00	0.00	146.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	137.50	0.50	0.00	136.00	1.00
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	136.50	0.00	0.00	136.00	0.50
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	135.50	1.00	2.00	113.00	19.50
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	130.50	0.00	1.00	129.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	128.00	0.50	0.00	127.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAAC...........................	21	2	128.00	0.00	0.00	128.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	126.50	1.50	0.50	123.50	1.00
.................................................................................TCAAAACCTCCTTGAGTGAGC...........................	21	2	114.50	0.00	0.00	114.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	94.50	7.00	14.50	57.50	15.50
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	86.50	14.50	22.00	47.50	2.50
.................................................................................ACACAACCTCCTTGAGTGAGC...........................	21	2	84.50	0.50	0.00	84.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	84.00	3.00	9.50	27.50	44.00
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	81.00	0.00	0.00	68.50	12.50
.................................................................................TCACAACCTCCTTGAATGAGC...........................	21	2	80.50	0.00	0.00	80.50	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	73.50	0.00	0.50	72.00	1.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	68.00	0.50	0.50	66.50	0.50
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	66.00	0.00	0.50	65.50	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	61.50	1.50	0.00	60.00	0.00
.................................................................................GCACAACCTCCTTGAGTGAGC...........................	21	2	60.00	0.00	0.00	60.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	58.50	2.00	1.00	55.50	0.00
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	57.50	0.00	1.00	56.50	0.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	56.00	0.00	0.00	55.00	1.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	54.00	0.50	0.50	53.00	0.00
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	54.00	0.00	0.00	54.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	53.50	0.00	0.50	51.50	1.50
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	52.50	0.50	0.00	52.00	0.00
.................................................................................TCACAACTTCCTTGAGTGAGC...........................	21	2	50.00	0.00	0.00	50.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	49.50	5.00	3.50	40.00	1.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	49.00	0.50	1.00	47.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	47.00	0.00	0.50	46.50	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	46.00	0.00	0.00	45.00	1.00
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	45.50	0.00	0.00	43.50	2.00
.................................................................................TCACAGCCTCCTTGAGTGAGCGA.........................	23	2	41.00	1.00	1.00	39.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	40.00	2.50	1.00	35.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	39.00	0.00	0.00	35.00	4.00
.................................................................................TCACAGCCTCCTTGAGTGAG............................	20	2	37.00	0.00	0.00	37.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	37.00	0.00	0.00	36.50	0.50
.................................................................................TCACAACCTTCTTGAGTGAGC...........................	21	2	36.00	0.00	0.00	36.00	0.00
.................................................................................TCATAACCTCCTTGAGTGAGC...........................	21	2	36.00	0.00	0.00	36.00	0.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	34.50	0.50	1.00	33.00	0.00
.................................................................................TTACAACCTCCTTGAGTGAGC...........................	21	2	33.50	0.00	0.00	33.50	0.00
.................................................................................TCACCACCTCCTTGAGTGAGC...........................	21	2	33.50	0.00	0.00	33.50	0.00
................................................................................CTCACAACCTCCTTGAGTGAGC...........................	22	2	33.00	0.50	0.50	32.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	33.00	0.00	0.00	33.00	0.00
.................................................................................TCACACCCTCCTTGAGTGAGC...........................	21	2	31.50	0.00	0.00	31.50	0.00
.................................................................................TCACAACCTCTTTGAGTGAGC...........................	21	2	31.50	0.00	0.00	31.00	0.50
.................................................................................TCACxACCTCCTTGAGTGAGC...........................	20	2	29.50	0.00	0.00	29.50	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	28.50	0.00	0.00	28.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	28.00	0.50	0.00	27.50	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	27.00	0.00	1.00	24.50	1.50
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	26.50	0.00	0.00	24.50	2.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	25.50	0.00	0.00	25.50	0.00
.................................................................................TCCCAACCTCCTTGAGTGAGC...........................	21	2	24.50	0.00	0.00	24.50	0.00
..................................................................................CACAGCCTCCTTGAGTGAGCGA.........................	22	2	24.50	1.00	0.50	23.00	0.00
.................................................................................TCACAACCTCCATGAGTGAGC...........................	21	2	21.00	0.00	0.00	21.00	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	20.50	0.00	0.50	20.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	20.00	0.50	1.00	7.50	11.00
..................................................................................CACGACCTCCTTGAGTGAGCG..........................	21	2	20.00	0.00	0.00	1.00	19.00
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	20.00	0.50	0.50	19.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	18.00	3.00	5.00	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGAG..........................	22	2	17.50	0.00	1.00	16.00	0.50
.................................................................................TCACAACCACCTTGAGTGAGC...........................	21	2	17.50	0.00	0.00	17.50	0.00
.................................................................................CCACAACCTCCTTGAGTGAG............................	20	2	17.00	0.00	0.00	16.50	0.50
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	17.00	0.00	1.00	15.00	1.00
...................................................................................ACAACCTCCTTGAGTGAGCGAT........................	22	2	16.00	2.00	4.00	7.00	3.00
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	15.50	1.00	0.00	14.50	0.00
.................................................................................TCTCAACCTCCTTGAGTGAGC...........................	21	2	15.50	0.00	0.50	15.00	0.00
......................................................................................ACCTCCTTGAGTGAGCGT.........................	18	2	15.50	0.00	0.00	0.00	15.50
.................................................................................TCACAACCTCCTTGAGTGTGC...........................	21	2	15.00	0.00	0.00	15.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	14.50	2.00	0.50	12.00	0.00
.................................................................................TCACAACCTACTTGAGTGAG............................	20	2	14.00	0.00	0.00	14.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGCG..........................	22	2	13.50	0.00	0.00	13.50	0.00
..................................................................................CACAGCCTCCTTGAGTGAGC...........................	20	2	13.00	0.00	0.00	13.00	0.00
.................................................................................TCACAACATCCTTGAGTGAG............................	20	2	13.00	0.00	0.00	13.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGG...........................	21	2	13.00	0.00	0.00	9.00	4.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	13.00	1.00	0.00	8.50	3.50
.....................................ACTCACTCAACCTGGGTGTG........................................................................	20	2	13.00	0.00	0.00	1.50	11.50
.................................................................................TCACAACCTCCTAGAGTGAGC...........................	21	2	13.00	0.00	0.00	11.00	2.00
.................................................................................TCACAACCxCCTTGAGTGAGC...........................	20	2	12.50	0.00	0.00	12.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	11.50	0.50	0.50	9.50	1.00
.................................................................................TCACAACCTACTTGAGTGAGCG..........................	22	2	11.50	0.00	0.00	11.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAACG..........................	22	2	11.00	0.50	0.00	10.50	0.00
.................................................................................TCACAACCTCCxTGAGTGAGC...........................	20	2	10.50	0.00	0.00	10.50	0.00
.................................................................................TCACTACCTCCTTGAGTGAGC...........................	21	2	10.50	0.00	0.00	10.50	0.00
.................................................................................TAACAACCTCCTTGAGTGAG............................	20	2	10.00	0.00	0.00	10.00	0.00
.................................................................................TCAAAACCTCCTTGAGTGAG............................	20	2	10.00	0.00	0.00	10.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAG............................	20	2	9.00	0.00	0.00	9.00	0.00

droVir3

AAATAAACCGAA-------CA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGC	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	9255.50	360.50	8699.00	16.50	43.50	136.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	5176.50	1291.50	3840.50	18.50	9.50	16.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	2587.00	53.00	2504.00	0.00	8.50	21.50
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	2207.50	1072.00	1065.50	47.50	8.00	14.50
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1344.00	171.50	819.50	0.50	67.00	285.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	1272.50	74.50	1173.50	0.50	3.00	21.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	621.00	256.00	340.00	5.00	5.50	14.50
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	302.50	2.00	299.00	0.00	0.50	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	222.50	35.00	175.50	0.50	2.00	9.50
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	139.50	42.50	94.50	1.00	1.50	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	136.00	0.50	121.50	0.00	0.50	13.50
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	135.00	6.00	128.00	0.00	0.00	1.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	100.50	21.50	78.00	0.50	0.00	0.50
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	99.50	29.00	63.50	1.00	3.50	2.50
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	70.50	0.00	70.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	69.50	20.50	31.50	0.50	6.50	10.50
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	68.50	0.50	67.50	0.00	0.00	0.50
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	61.50	0.00	61.50	0.00	0.00	0.00
................................................................................ATCACAACCTCCTTGAGTGAGC...........................	22	2	60.00	4.50	53.00	2.50	0.00	0.00
.......................................TCACTCAACCTGGGTGTGATGT....................................................................	22	2	57.00	1.00	50.50	5.50	0.00	0.00
................................................................................ATCACAACCTCCTTGAGTGAG............................	21	2	53.00	1.50	50.50	0.00	0.00	1.00
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	47.50	8.00	38.50	0.00	0.50	0.50
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	38.50	0.00	37.50	0.50	0.00	0.50
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	37.00	0.00	37.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	36.00	1.00	35.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	36.00	0.50	35.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	34.00	0.50	33.00	0.50	0.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	31.50	0.50	31.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGACCG..........................	22	2	30.00	1.00	29.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGTGTGAGCG..........................	22	2	29.50	0.00	29.50	0.00	0.00	0.00
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	29.00	0.00	28.50	0.00	0.00	0.50
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	28.00	1.00	24.50	0.00	0.50	2.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	28.00	0.00	28.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	27.50	12.00	15.00	0.00	0.00	0.50
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	26.00	0.50	24.50	0.00	0.50	0.50
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	26.00	0.50	25.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	25.50	10.50	15.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	24.00	0.00	24.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAGCG..........................	22	2	23.00	2.00	21.00	0.00	0.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGC...........................	21	2	23.00	0.00	23.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	21.50	0.00	21.50	0.00	0.00	0.00
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	20.50	0.00	20.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAG............................	20	2	20.50	0.00	20.50	0.00	0.00	0.00
..................................................................................CACAACATCCTTGAGTGAGC...........................	20	2	20.50	0.00	20.50	0.00	0.00	0.00
................................................................................ATCACAACCTCCTTGAGTGA.............................	20	2	20.00	1.00	18.00	0.00	0.00	1.00
.................................................................................TCACAAACTCCTTGAGTGAGCG..........................	22	2	20.00	0.00	20.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAG............................	20	2	19.50	0.00	19.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	19.00	0.50	18.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	18.50	0.00	18.50	0.00	0.00	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	18.00	1.50	16.50	0.00	0.00	0.00
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	18.00	0.50	17.00	0.50	0.00	0.00
.................................................................................TCACAAACTCCTTGAGTGAG............................	20	2	17.50	0.00	17.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGTGTGAGC...........................	21	2	17.50	0.50	17.00	0.00	0.00	0.00
.......................................TCACTCAACCTGGGTGTGATG.....................................................................	21	2	17.50	0.50	16.50	0.50	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	17.50	0.50	16.00	0.00	0.00	1.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	17.50	0.00	17.50	0.00	0.00	0.00
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	16.00	0.00	16.00	0.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	16.00	0.00	16.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	15.50	3.50	12.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	15.00	1.50	13.50	0.00	0.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	14.50	0.00	14.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGTGTGAG............................	20	2	13.50	0.00	13.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	13.50	0.00	13.50	0.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	13.00	0.00	13.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCC..........................	22	2	13.00	1.00	12.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTGGAGTGAGC...........................	21	2	12.50	0.00	12.50	0.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	12.50	0.00	12.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	12.50	2.00	10.50	0.00	0.00	0.00
..................................................................................CACAACATCCTTGAGTGAGCG..........................	21	2	12.50	0.00	12.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	12.50	1.00	11.00	0.50	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTG........................................................................	20	2	12.00	0.00	5.50	0.00	0.00	6.50
.................................................................................TCACAACCTCCTTGAGTGAC............................	20	2	12.00	0.00	11.50	0.00	0.00	0.50
.................................................................................TCACAACCTCCGTGAGTGAGCG..........................	22	2	12.00	0.00	12.00	0.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGCGAGC...........................	20	2	11.50	0.50	11.00	0.00	0.00	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	11.50	0.00	9.50	0.00	0.00	2.00
.................................................................................TCACAACCTCCTTGACTGAG............................	20	2	11.50	0.00	11.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGACTGAGCG..........................	22	2	11.50	0.00	11.50	0.00	0.00	0.00
..................................................................................CACAACCTCCTTGCGTGAGCG..........................	21	2	11.50	0.00	11.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	11.00	1.50	9.50	0.00	0.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	11.00	0.00	11.00	0.00	0.00	0.00
.................................................................................TCACAAACTCCTTGAGTGACC...........................	21	2	11.00	0.00	11.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	11.00	0.00	11.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	10.50	2.50	7.50	0.50	0.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGAT........................	22	2	10.50	4.00	5.00	0.00	1.00	0.50
.................................................................................TCACAACCTCCGTGAGTGAG............................	20	2	10.50	0.00	10.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCGA.........................	23	2	10.50	1.50	9.00	0.00	0.00	0.00
.................................................................................TCACAACCTACTTGAGTGAGC...........................	21	2	10.00	0.00	9.50	0.00	0.00	0.50
.................................................................................TCACAACCCCCTTGAGTGAGCG..........................	22	2	10.00	1.00	9.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	10.00	0.00	10.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGGGAGCG..........................	22	2	10.00	2.50	7.00	0.00	0.50	0.00
.................................................................................TCACAACCTCCTTGAGTTACC...........................	21	2	9.50	0.00	9.50	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	9.50	1.00	7.50	1.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCG............................	20	2	9.00	0.00	9.00	0.00	0.00	0.00
.................................................................................TCACAACATCCTTGAGTGAGC...........................	21	2	9.00	0.00	9.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAG............................	20	2	9.00	0.00	9.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCTTGAGTGGG............................	20	2	9.00	0.00	9.00	0.00	0.00	0.00
..................................................................................CACAACCTCCTTGAGGGAGCG..........................	21	2	9.00	0.00	5.00	0.00	1.50	2.50
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	9.00	0.50	8.00	0.00	0.00	0.50
..................................................................................CACAACCTCCTTGAGGGAGC...........................	20	2	9.00	0.00	9.00	0.00	0.00	0.00
..................................................................................CACAACATCCTTGAGGGAGC...........................	20	2	9.00	0.00	9.00	0.00	0.00	0.00
.................................................................................TCACAACCTCCGTGAGAGAGC...........................	21	2	9.00	0.00	9.00	0.00	0.00	0.00

droMoj3

AAACTA----AG-------AA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	13631.50	271.50	8112.50	5217.50	30.00
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	5570.50	348.50	3240.00	1954.50	27.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	4565.50	71.00	2826.00	1668.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	2654.50	74.50	1600.50	978.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	2084.00	424.00	998.50	599.50	62.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	1451.50	107.00	857.00	486.00	1.50
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	839.50	52.50	493.50	293.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	734.50	136.50	401.50	186.00	10.50
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	535.00	22.00	320.00	193.00	0.00
.................................................................................TCACAACCTCCTTGAGTGA.............................	19	2	491.00	1.00	298.50	191.50	0.00
..................................................................................CACAACCTCCTTGAGTGAG............................	19	2	286.50	4.00	183.00	99.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGC...........................	19	2	163.00	1.00	95.00	67.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGT...........................	21	2	159.00	0.50	100.00	58.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCG..........................	22	2	148.50	0.00	34.50	113.00	1.00
.................................................................................TCACAACCTCCTTGCGTGAGC...........................	21	2	134.50	0.00	20.50	114.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGTT........................	23	2	133.50	8.50	85.50	39.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAG............................	20	2	111.50	0.00	21.00	90.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	102.00	15.00	56.00	31.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGC...........................	21	2	98.50	0.00	59.50	39.00	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	95.50	13.00	50.00	31.00	1.50
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	88.00	4.50	44.00	38.50	1.00
.................................................................................TCACAACCTCCTTGAGTGAGCT..........................	22	2	88.00	2.50	45.50	40.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	67.00	5.00	42.50	19.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGTT........................	24	2	62.50	0.50	40.00	22.00	0.00
.................................................................................TCACAACCTCCTTGAGTGCGC...........................	21	2	60.50	0.00	12.50	48.00	0.00
.................................................................................TCACAACCTCCTTGAGTGATC...........................	21	2	56.00	1.00	25.00	30.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGA...........................	21	2	56.00	1.50	35.00	19.50	0.00
.....................................ACTCACTCAACCTGGGTGT.........................................................................	19	2	53.50	0.00	26.00	27.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGC...........................	21	2	42.50	1.00	19.50	22.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	41.50	7.50	23.00	10.00	1.00
.................................................................................TCACAACCTCCTTGACTGAGC...........................	21	2	41.00	0.00	29.50	11.50	0.00
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	40.50	0.50	12.50	27.50	0.00
....................................GACTCACTCAACCTGGGTGT.........................................................................	20	2	40.50	1.00	20.00	19.50	0.00
.................................................................................TCACAACCTCCTTGAGAGAGC...........................	21	2	40.50	0.00	33.50	7.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCG..........................	22	2	38.00	0.00	24.50	13.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCG............................	20	2	37.50	0.00	7.00	30.50	0.00
.................................................................................TCACAACCTCCTTGAGTGCGCG..........................	22	2	37.00	0.00	8.00	29.00	0.00
...................................................................................ACAACCTCCTTGAGTGAG............................	18	2	35.00	0.00	22.50	12.00	0.50
.................................................................................TAACAACCTCCTTGAGTGAGC...........................	21	2	34.00	0.50	25.50	8.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAG............................	20	2	33.50	0.00	19.50	14.00	0.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	32.00	0.00	20.50	11.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGA.........................	23	2	32.00	0.00	7.50	24.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGC...........................	21	2	30.00	1.00	18.00	11.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	29.00	5.50	14.00	9.00	0.50
.................................................................................TCACAACCTCCTTGAGTGGGC...........................	21	2	28.50	0.00	16.00	12.50	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGATT.......................	24	2	28.50	1.50	16.00	11.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGCG..........................	22	2	26.50	0.00	17.00	9.50	0.00
.................................................................................TCACAAACTCCTTGAGTGAGC...........................	21	2	26.00	0.00	18.00	8.00	0.00
.................................................................................TCACAACCTCCCTGAGTGAGC...........................	21	2	25.50	0.00	10.00	15.50	0.00
.................................................................................TCACAACCTCCGTGAGTGAGC...........................	21	2	25.00	0.00	19.50	5.50	0.00
.....................................ACTCACTCAACCTGGGTGTGT.......................................................................	21	2	25.00	0.00	13.50	11.50	0.00
.................................................................................TCACAACCTCCTTGGGTGAGC...........................	21	2	25.00	0.00	15.50	9.50	0.00
.....................................ACTCACTCAACCTGGGTGTGA.......................................................................	21	2	24.00	0.50	9.00	14.50	0.00
.................................................................................TCACAACCTCCTTGCGTGAGCGT.........................	23	2	23.50	0.00	6.00	17.50	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCGA.........................	23	2	23.50	0.50	15.50	7.00	0.50
.................................................................................CCACAACCTCCTTGAGTGAGC...........................	21	2	23.00	0.00	15.00	8.00	0.00
.................................................................................TCACAACCTCCTTCAGTGAGC...........................	21	2	23.00	0.00	14.50	8.50	0.00
...................................................................................ACAACCTCCTTGAGTGAGCGT.........................	21	2	23.00	0.50	13.00	9.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCA..........................	22	2	23.00	0.00	9.50	13.50	0.00
.................................................................................TCACAACCTCCTTGAGTGATCG..........................	22	2	22.50	1.50	13.00	8.00	0.00
.................................................................................TCACAACCTCCTTAAGTGAGC...........................	21	2	22.50	0.00	8.50	14.00	0.00
..................................................................................CACAACCTCCTTGCGTGAGCG..........................	21	2	22.00	0.00	6.50	15.50	0.00
..................................................................................CACAACCTCCTTGAGCGAGC...........................	20	2	21.50	0.00	14.50	7.00	0.00
.................................................................................TCACAGCCTCCTTGAGTGAGCG..........................	22	2	21.00	0.50	11.00	9.00	0.50
.................................................................................TCACGACCTCCTTGAGTGAGC...........................	21	2	20.50	0.00	12.00	8.50	0.00
.................................................................................TCACAACCTCCTTGAGTAAGC...........................	21	2	20.50	0.50	7.00	13.00	0.00
.................................................................................TCACAATCTCCTTGAGTGAGC...........................	21	2	20.00	0.00	15.00	5.00	0.00
.................................................................................TCACAACCTCCTTGCGTGCGC...........................	21	2	20.00	0.00	2.00	18.00	0.00
..................................................................................CACAGCCTCCTTGAGTGAGCGA.........................	22	2	19.50	1.00	13.00	5.50	0.00
.................................................................................TCACAACCTCCTCGAGTGAGC...........................	21	2	19.00	0.00	12.50	6.50	0.00
.................................................................................TCACAACCTCCTTGAGTGGGCG..........................	22	2	18.50	1.00	8.00	9.50	0.00
.................................................................................TCACAACCTCCTTTAGTGAGC...........................	21	2	18.50	0.00	9.00	9.50	0.00
.................................................................................TCACAACCTCCTTGAGTGACC...........................	21	2	18.50	0.00	13.00	5.50	0.00
.................................................................................TCACCACCTCCTTGAGTGAGC...........................	21	2	18.50	0.00	5.50	13.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGATT.......................	25	2	18.50	1.00	9.50	8.00	0.00
.................................................................................TCACAACCTCCTTGAGGGAGC...........................	21	2	18.50	0.00	11.50	7.00	0.00
.................................................................................TCACAACCGCCTTGAGTGAGC...........................	21	2	18.00	0.00	13.00	5.00	0.00
..................................................................................CACAACCTCCTTGCGTGAGC...........................	20	2	17.50	0.00	2.50	15.00	0.00
.................................................................................TCACAACCTCCTTGATTGAGC...........................	21	2	17.50	0.50	11.00	6.00	0.00
.....................................ACTCACTCAACCTGGGTGTG........................................................................	20	2	17.50	0.00	7.50	10.00	0.00
.................................................................................TCACAACCTCCTTGAGCGAGCGA.........................	23	2	16.50	1.00	11.50	3.00	1.00
.................................................................................TCACAACCTCCTTGAGTTAG............................	20	2	16.50	0.00	4.00	12.50	0.00
.................................................................................TCGCAACCTCCTTGAGTGAGCGA.........................	23	2	16.00	1.50	9.50	5.00	0.00
.................................................................................TCACAACCTCCTTGACTGAG............................	20	2	16.00	0.00	6.50	9.50	0.00
.................................................................................TCACAACCTCCTTGAGTGGG............................	20	2	15.50	0.00	9.50	6.00	0.00
..................................................................................CACAGCCTCCTTGAGTGAGCG..........................	21	2	15.00	1.50	8.50	5.00	0.00
..................................................................................CACAACCTCCTTGAGTGCGCG..........................	21	2	15.00	0.00	4.00	11.00	0.00
.................................................................................TCACAACCCCCTTGAGTGAGC...........................	21	2	15.00	0.00	9.00	6.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................	25	2	14.50	4.00	7.00	3.50	0.00
.................................................................................TCACAACCTCCTTGAGTGAT............................	20	2	14.50	0.00	7.50	7.00	0.00
.................................................................................TCACAACCTCCTTGGGTGAGCG..........................	22	2	14.50	0.00	7.50	7.00	0.00
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	14.50	3.00	7.50	4.00	0.00
.....................................ACTCACTCAACCTGGGTGTGAT......................................................................	22	2	14.50	0.00	6.00	7.50	1.00
.................................................................................TCACACCCTCCTTGAGTGAGC...........................	21	2	14.00	0.00	5.50	8.50	0.00
.................................................................................TCACAACCTCCTTGAATGAGC...........................	21	2	14.00	0.50	7.50	6.00	0.00
.................................................................................TCACAACCTCCTTGAGTGAGTG..........................	22	2	14.00	0.00	8.00	6.00	0.00
.................................................................................TCACAACCTCCTTGAGAGAG............................	20	2	13.50	0.00	10.00	3.50	0.00
..................................................................................CACAACCTCCTTGAGCGAGCG..........................	21	2	13.50	0.50	9.50	3.50	0.00
..................................................................................CACAACCTCCTTGAGTCAGC...........................	20	2	13.00	0.00	8.00	5.00	0.00
.................................................................................TCGCAACCTCCTTGAGTGAG............................	20	2	13.00	0.00	7.50	5.50	0.00
.................................................................................TCACAACCTCATTGAGTGAGC...........................	21	2	13.00	0.00	9.00	4.00	0.00

droGri2

AAAATAA--AAGAACTAAACA-TTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA	Size	Hit Count	Total Norm	V109 Male body
.................................................................................TCACAACCTCCTTGAGTGAGCGA.........................	23	2	346.50	346.50
.................................................................................TCACAACCTCCTTGAGTGAGCG..........................	22	2	334.00	334.00
.................................................................................TCACAACCTCCTTGAGTGAGC...........................	21	2	107.50	107.50
..................................................................................CACAACCTCCTTGAGTGAGCGA.........................	22	2	100.00	100.00
..................................................................................CACAACCTCCTTGAGTGAGCG..........................	21	2	37.00	37.00
.................................................................................TCACAACCTCCTTGAGTGAGCGT.........................	23	2	18.00	18.00
...................................................................................ACAACCTCCTTGAGTGAGCGA.........................	21	2	14.50	14.50
..................................................................................CACAACCTCCTTGAGTGAGC...........................	20	2	12.50	12.50
.................................................................................TCACAACCTCCTTGAGTGAG............................	20	2	8.00	8.00
..................................................................................CACAACCTCCTTGAGTGAGCGAT........................	23	2	7.50	7.50
.................................................................................TCACAACCTCCTTGAGTCAGCG..........................	22	2	5.50	5.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAT........................	24	2	5.00	5.00
.................................................................................TCACAACCTCCTTGAGTGAGCGC.........................	23	2	5.00	5.00
.................................................................................TCACAACCTCCTTGAGTAAGCG..........................	22	2	4.00	4.00
.................................................................................TCACAACCTCCTTGAGTGAGCGG.........................	23	2	3.00	3.00
.................................................................................TCACAACCTCCTTGAGTGAGCGAA........................	24	2	3.00	3.00
...................................................................................ACAACCTCCTTGAGTGAGCG..........................	20	2	3.00	3.00
.................................................................................TCACAACCTCCTTGAGTCAGCGA.........................	23	2	3.00	3.00
.................................................................................TCACAACCTCCTTGAGTTAGCG..........................	22	2	2.50	2.50
..................................................................................CACAACCTCCTTGAGTGAGCGT.........................	22	2	2.50	2.50
.................................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................	25	2	2.00	2.00
.................................................................................TCACAACCTCCTTGAGTCAGC...........................	21	2	2.00	2.00
..................................................................................CACAACCTCCTTGAGTGAGCGAA........................	23	2	2.00	2.00
.................................................................................TCACAACCTCCTTGAGTGAGCGATT.......................	25	2	1.50	1.50
.................................................................................TCACAACCCCCTTGAGTGAGCGA.........................	23	2	1.50	1.50
.................................................................................TCTCAACCTCCTTGAGTGAGCG..........................	22	2	1.50	1.50
.................................................................................TCACAACCTCCTTGAGTTAGCGA.........................	23	2	1.50	1.50
.................................................................................TCACAACCTCCTTGAGTGCGCGA.........................	23	2	1.50	1.50
.................................................................................TCACAACCTCCTTGAGTTAGC...........................	21	2	1.50	1.50
.................................................................................TCCCAACCTCCTTGAGTGAGCGA.........................	23	2	1.50	1.50

Generated: 04/20/2012 at 05:19:37 EDT

dme-mir-307a

chr2R:5508756-5508843 -

Known_mirbase

intron

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup