Possible Orthologs for dme-mir-307a

droSim1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr2R:4140609-4140726 - 96.64
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAAGC
SizeHit CountTotal NormV044
Embryo
M023
Head
M024
Male body
M025
Embryo
.......................................................................CACAACCTCCTTGAGTGAGCG..........................2121699.500.001673.5017.508.50
......................................................................TCACAACCTCCTTGAGTGAGC...........................212891.5025.00855.506.504.50
......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232199.500.00194.503.501.50
......................................................................TCACAACCTCCTTGAGTGAG............................202165.500.50162.002.001.00
......................................................................TCACAACCTCCTTGAGTGAGCG..........................222164.5020.50141.501.501.00
......................................................................TCACAACCTCCTTGAGTGAGCGA.........................232108.0040.5060.001.506.00
.......................................................................CACAACCTCCTTGAGTGAGC...........................202100.000.0096.503.500.00
.......................................................................CACAACCTCCTTGAGTGAGCGA.........................22270.505.5061.501.502.00
.......................................................................CACAACCTCCTTGAGTGAG............................19262.000.0061.000.001.00
......................................................................TCACAACCTCCTTGAGTGAGCGG.........................23237.000.0035.000.501.50
...........................ACTCACTCAACCTGGGTGTG.......................................................................20236.500.0036.500.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24235.500.5030.500.504.00
...........................................................................ACCTCCTTGAGTGAGCGT.........................18228.500.0028.500.000.00
......................................................................TCACAACCTCCTTGAGTG..............................18219.500.0019.500.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGAT........................23218.000.0017.000.001.00
........................................................................ACAACCTCCTTGAGTGAGCGT.........................21217.500.0017.500.000.00
.......................................................................CACAGCCTCCTTGAGTGAGCG..........................21215.000.0015.000.000.00
.......................................................................CACGACCTCCTTGAGTGAGCG..........................21214.500.0014.000.500.00
.......................................................................CACAACCTCCTTGAGGGAGCG..........................21214.000.0014.000.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGG.........................22212.000.0010.500.001.50
......................................................................TCACAACCTCCTTGAGTGAC............................20210.000.0010.000.000.00
........................................................................ACAACCTCCTTGAGTGAGCGA.........................21210.003.006.500.000.50
.......................................................................CACAACCTCCTTGAGTGAGCGT.........................2229.500.009.000.500.00
......................................................................TCACAACCTCCTTGAGTGATCGT.........................2328.500.008.000.000.50
......................................................................TCACAACCTCCTTGAGTGAGCGAC........................2428.000.008.000.000.00
......................................................................TCACAACCTCCTTGAGTGAGT...........................2128.000.008.000.000.00
...........................ACTCACTCAACCTGGGTGTGA......................................................................2127.000.506.500.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGC.........................2326.500.005.500.500.50
.......................................................................CACAACCTCCTTGATTGAGCG..........................2125.500.004.500.001.00
..........................GACTCACTCAACCTGGGTGTG.......................................................................2125.500.005.500.000.00
.......................................................................CACAACCTCCTTGAGAGAGCG..........................2125.000.005.000.000.00
........................................................................ACAACCTCCTTGAGTGAGCGAT........................2224.501.502.500.000.50
......................................................................TCACAACCTCCTTGAGTGA.............................1924.500.004.500.000.00
......................................................................TCACAACCTCCTTGAGTTAGCGT.........................2324.000.004.000.000.00
......................................................................TCACAACCTCCTTGAGTGGGC...........................2123.500.003.500.000.00
......................................................................TCACAACCTCCTTGAGGGAGC...........................2123.500.003.500.000.00
...........................ACTCACTCAACCTGGGTGTGAT.....................................................................2223.501.502.000.000.00
.......................................................................CACAACCTCCTTGAGTGAGTG..........................2123.000.003.000.000.00
.......................................................................CACAACCTCCTTGAGTGGGCG..........................2123.000.003.000.000.00
.......................................................................CACAACCTCCTTGAGTGAGCA..........................2123.000.003.000.000.00
.......................................................................CACAACCCCCTTGAGTGAGCG..........................2122.500.002.500.000.00
.......................................................................CACAACCTCCTTGAGTGAGCC..........................2122.500.002.500.000.00
......................................................................TCACAACCTCCTTGAGTGAGA...........................2122.500.502.000.000.00
........................................................................ACAACCTCCTTGAGTGAGCG..........................2022.501.001.500.000.00
...........................................................................ACCTCCTTGAGTGAGCGG.........................1822.500.002.500.000.00
......................................................................TCACAACCTCCTTGAGTGATCGG.........................2322.500.002.500.000.00
...........................ACTCACTCAACCTGGGTG.........................................................................1822.500.002.500.000.00
.......................................................................CACAACCTCCTTTAGTGAGCG..........................2122.500.002.500.000.00
.......................................................................CACAACCTCCTTCAGTGAGCG..........................2122.500.002.500.000.00
......................................................................TCACAACCTCCTTGACTGAGC...........................2122.500.002.500.000.00
......................................................................TCACAACCTCCTTGATTGAGC...........................2122.000.002.000.000.00
......................................................................TCACAACCTCCTTGAGAGAGC...........................2122.000.002.000.000.00
........................................................................ACAACCTCCTTGAGTGAGC...........................1922.000.501.500.000.00
.......................................................................CACAACCTCCTTGAGTTAGCG..........................2122.000.001.000.001.00
......................................................................TCACAACCTCCTTGAGTCAGCGT.........................2322.000.002.000.000.00
.......................................................................CACAACCTCCTTGGGTGAGCG..........................2122.000.002.000.000.00
...........................ACTCACTCAACCTGGGTGTGT......................................................................2122.000.002.000.000.00
.......................................................................CACAACCTCCTTGAGCGAGCG..........................2122.000.002.000.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGTT........................2421.500.001.500.000.00
......................................................................TCACAACCTCCTTGAGTCAGCG..........................2221.500.001.500.000.00
......................................................................TCACAACCTCCTTGAGTTAGCGG.........................2321.500.001.500.000.00
......................................................................TCACAACCTCCTTGAGTGATCG..........................2221.500.001.500.000.00
......................................................................TCACAACCTCCTTGAGTGATCGA.........................2321.500.001.500.000.00
......................................................................TCGCAACCTCCTTGAGTGAGC...........................2121.500.001.500.000.00
...........................ACTCACTCAACCTGGGTGTGG......................................................................2121.500.001.500.000.00
......................................................................TCACAACCTCCTTCAGTGAG............................2021.500.001.500.000.00
...........................ACTCACTCAACCTGGGTGTGATG....................................................................2321.500.501.000.000.00
......................................................................TCACAACCTCCTTGAGTGAGCA..........................2221.500.001.500.000.00
........................................................................ACAACCTCCTTGAGTGAGCGG.........................2121.500.001.000.000.50
.......................................................................CACAACCTCCxTGAGTGAGCG..........................2021.500.001.500.000.00
.......................................................................CACAACCTCCTTGAGTGAC............................1921.500.001.500.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGAC........................2321.500.001.500.000.00
........................................................................ACAACCTCCTTGAGTGATCGA.........................2121.500.001.500.000.00


droSec1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_1:3126041-3126158 - 97.47
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAGC
SizeHit CountTotal NormV113
Male body
V114
Embryo
V115
Head
......................................................................TCACAACCTCCTTGAGTGAGC...........................21226428.00252.00120.0026056.00
......................................................................TCACAACCTCCTTGAGTGAGCG..........................2226609.00639.50221.505748.00
......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2322969.00465.00816.501687.50
......................................................................TCACAACCTCCTTGAGTGAG............................2022877.5040.008.002829.50
.......................................................................CACAACCTCCTTGAGTGAGC...........................2021978.5039.506.001933.00
.......................................................................CACAACCTCCTTGAGTGAGCG..........................2121178.50106.5016.501055.50
......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232817.5051.501.50764.50
.......................................................................CACAACCTCCTTGAGTGAGCGA.........................222737.00114.5099.00523.50
......................................................................TCACAACCTCCTTGAGTGA.............................192447.000.502.50444.00
........................................................................ACAACCTCCTTGAGTGAGC...........................192352.001.002.50348.50
........................................................................ACAACCTCCTTGAGTGAGCGA.........................212247.0031.0052.50163.50
.......................................................................CACAACCTCCTTGAGTGAGCGT.........................222173.5010.500.00163.00
........................................................................ACAACCTCCTTGAGTGAGCG..........................202147.0015.002.00130.00
.......................................................................CACAACCTCCTTGAGTGAG............................192138.500.000.50138.00
..........................GACTCACTCAACCTGGGTGT........................................................................202101.503.000.5098.00
......................................................................TCACAGCCTCCTTGAGTGAGCG..........................22281.501.501.0079.00
......................................................................TCACAACCTCCTTGAGTGAGA...........................21280.000.001.0079.00
.......................................................................CACAACCTCCTTGAGTGAGCGAT........................23274.5013.5011.5049.50
.......................................................................CACAGCCTCCTTGAGTGAGCG..........................21261.001.500.0059.50
......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24256.5012.008.5036.00
......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23249.004.001.0044.00
......................................................................TCACAAACTCCTTGAGTGAGC...........................21249.000.000.0049.00
...........................ACTCACTCAACCTGGGTGT........................................................................19248.500.001.0047.50
...........................ACTCACTCAACCTGGGTGTGT......................................................................21248.501.000.0047.50
......................................................................TCACAACCTCCTTGAGTGGGCG..........................22245.007.001.0037.00
......................................................................TCACAACCTCCTTGAGTGAGCGTT........................24241.503.500.0038.00
......................................................................TCACAACATCCTTGAGTGAGC...........................21241.000.000.5040.50
......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24240.005.507.0027.50
......................................................................TCACAACCTCCTTGAGTGAAC...........................21239.500.000.0039.50
......................................................................TCACAACCTCCTTGAGTGGGC...........................21237.501.000.0036.50
......................................................................TCACAACCTCCTTGAGTTAGC...........................21236.500.000.0036.50
......................................................................TCACAGCCTCCTTGAGTGAGC...........................21235.500.500.5034.50
......................................................................TCACAACCTCCTTGAGTGACC...........................21234.500.000.0034.50
......................................................................TCACAACCTACTTGAGTGAGC...........................21234.500.000.5034.00
......................................................................TCACAACCTCCTTGAGTGATC...........................21233.500.500.0033.00
......................................................................TCGCAACCTCCTTGAGTGAGC...........................21232.501.500.5030.50
......................................................................TCACAACCTCCTTGAGTAAGC...........................21231.501.000.0030.50
......................................................................TCACAACCTCCTTGAGCGAGC...........................21230.000.000.0030.00
........................................................................ACAACCTCCTTGAGTGAG............................18229.500.000.0029.50
......................................................................TAACAACCTCCTTGAGTGAGC...........................21229.000.000.0029.00
......................................................................CCACAACCTCCTTGAGTGAGC...........................21228.500.500.0028.00
......................................................................TCACAACCTCCTTGGGTGAGC...........................21228.000.000.0028.00
......................................................................TCACAGCCTCCTTGAGTGAGCGA.........................23228.001.002.5024.50
......................................................................TCACAACCTCCTTGATTGAGC...........................21226.000.000.0026.00
.....................................................................CTCACAACCTCCTTGAGTGAGC...........................22225.500.000.0025.50
......................................................................TCACAACCTCCTTGAGTGAGT...........................21225.500.500.0025.00
......................................................................TCACAACCTCCTTGAGTCAGC...........................21224.501.000.0023.50
......................................................................TCACAACCCCCTTGAGTGAGC...........................21224.000.500.0023.50
......................................................................TCACAACCTCCTTGAGTGAGCA..........................22223.001.000.5021.50
.......................................................................CACAGCCTCCTTGAGTGAGCGA.........................22223.002.000.5020.50
......................................................................TCAAAACCTCCTTGAGTGAGC...........................21222.000.000.0022.00
......................................................................TCACAACCTCCTTTAGTGAGC...........................21222.000.000.0022.00
......................................................................TCACGACCTCCTTGAGTGAGC...........................21222.000.000.5021.50
........................................................................ACAACCTCCTTGAGTGAGCGT.........................21221.500.500.5020.50
......................................................................TCACAACCTCCTCGAGTGAGC...........................21220.500.500.0020.00
......................................................................ACACAACCTCCTTGAGTGAGC...........................21220.000.000.0020.00
......................................................................TCACAACCTCCTTGAGTGGGCGA.........................23220.001.504.5014.00
......................................................................TCACAACCTCCCTGAGTGAGC...........................21219.501.000.0018.50
......................................................................TCACAACCTCATTGAGTGAGC...........................21218.500.000.0018.50
.......................................................................CACAACCTCCTTGAGTGAGCGAA........................23216.001.500.5014.00
......................................................................TCTCAACCTCCTTGAGTGAGC...........................21216.000.000.0016.00
...........................ACTCACTCAACCTGGGTGTGA......................................................................21215.500.500.5014.50
......................................................................TTACAACCTCCTTGAGTGAGC...........................21215.500.000.5015.00
......................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................25215.002.000.5012.50
......................................................................TCACAACCACCTTGAGTGAGC...........................21214.500.000.0014.50
......................................................................TCACAACCTCCTTAAGTGAGC...........................21213.500.000.0013.50
...........................ACTCACTCAACCTGGGTGTGAT.....................................................................22213.500.506.007.00
......................................................................TCACxACCTCCTTGAGTGAGC...........................20213.500.000.5013.00
......................................................................TCACAACATCCTTGAGTGAGCG..........................22213.000.500.0012.50
......................................................................GCACAACCTCCTTGAGTGAGC...........................21213.000.000.0013.00
......................................................................TCACAACCTCTTTGAGTGAGC...........................21212.500.000.0012.50
......................................................................TCACAACCTCCTTGACTGAGC...........................21212.500.500.0012.00
......................................................................TCATAACCTCCTTGAGTGAGC...........................21212.000.000.0012.00
......................................................................TCACAAACTCCTTGAGTGAGCG..........................22211.500.000.0011.50
......................................................................TCACAACCTCCTTGAGTGCGC...........................21211.503.000.008.50
.......................................................................CACAACCTCCTTGAGTGA.............................18211.500.000.0011.50
......................................................................TCACAACCTCCTTGAATGAGC...........................21211.500.000.0011.50
......................................................................TCACAACCTCCTTGAGTGAGCGG.........................23211.500.502.508.50
......................................................................TCACAACCCCCTTGAGTGAGCG..........................22211.501.500.0010.00
......................................................................TCACAACCTCCTTGAGTGCGCG..........................22211.507.501.003.00
......................................................................TCACAATCTCCTTGAGTGAGC...........................21211.000.000.0011.00
........................................................................ACAACCTCCTTGAGTGAGCGAT........................22211.000.503.507.00
......................................................................TCACAACCTCCTTGAGTGAGCT..........................22210.500.500.0010.00
......................................................................TCACGACCTCCTTGAGTGAGCG..........................22210.002.000.507.50
......................................................................TCACAACTTCCTTGAGTGAGC...........................21210.000.000.0010.00
......................................................................TCACAACCTTCTTGAGTGAGC...........................2129.500.000.009.50
......................................................................TCACAACCTCCTTGAGTAAGCG..........................2229.000.500.008.50
.......................................................................CACAGCCTCCTTGAGTGAGC...........................2028.500.000.008.50
......................................................................TCACAACCTCCTTCAGTGAGC...........................2128.000.000.008.00
......................................................................TCACAACCTCCTTGAGCGAGCG..........................2228.001.501.505.00
......................................................................TCACAACATCCTTGAGTGAG............................2028.000.000.008.00
......................................................................TCACACCCTCCTTGAGTGAGC...........................2127.500.000.007.50
........................................................................ACAGCCTCCTTGAGTGAGCG..........................2027.500.000.007.50
......................................................................TCACAACCTCCTTGAGTGATCG..........................2227.000.000.007.00
......................................................................TCACAACCTCCTTGAGTGACCG..........................2227.001.500.005.50
......................................................................TCACAACCTCCTTGAGTGTGCG..........................2227.004.000.003.00
......................................................................TCACAACCTCCTTGGGTGAGCG..........................2227.001.500.005.50
......................................................................TCACAACCTCCTTGAGTGAACG..........................2227.000.000.506.50
......................................................................TCACAACCTCCTTGAGTGAGCC..........................2227.000.500.006.50
.......................................................................CACAACCTCCTTGAGTGAGCGC.........................2227.000.500.006.50
......................................................................TCGCAACCTCCTTGAGTGAGCG..........................2227.000.500.006.50


droYak2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 chr2L:18140631-18140748 - 98.31
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal NormV046
Embryo
V052
Head
V120
Male body
V058
Head
M026
Head
......................................................................TCACAACCTCCTTGAGTGAGC...........................2128662.5011.002581.0082.505836.50151.50
......................................................................TCACAACCTCCTTGAGTGAGCG..........................2227605.007.502242.50155.005166.5033.50
......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2322431.5037.00696.50127.501557.5013.00
......................................................................TCACAACCTCCTTGAGTGAG............................2022307.000.00724.0014.001552.5016.50
.......................................................................CACAACCTCCTTGAGTGAGCG..........................2121598.000.50367.5026.50953.50250.00
.......................................................................CACAACCTCCTTGAGTGAGC...........................202969.000.00259.509.50689.0011.00
.......................................................................CACAACCTCCTTGAGTGAGCGA.........................222921.505.50241.0026.50634.0014.50
......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232888.500.00241.0015.00598.0034.50
......................................................................TCACAACCTCCTTGCGTGAGCG..........................222298.500.0036.502.00260.000.00
........................................................................ACAACCTCCTTGAGTGAGCGA.........................212264.503.5063.508.00187.502.00
......................................................................TCACAACCTCCTTGAGTGA.............................192205.000.0068.500.00136.500.00
........................................................................ACAACCTCCTTGAGTGAGC...........................192133.000.0038.501.0093.500.00
........................................................................ACAACCTCCTTGAGTGAGCG..........................202121.000.0029.001.5090.500.00
......................................................................TCACAACCTCCTTGCGTGAGC...........................212120.500.0013.000.00107.500.00
......................................................................TCACAACCTCCTTGAGTGCGCG..........................222111.000.0012.000.5098.500.00
.......................................................................CACAACCTCCTTGAGTGAG............................19295.000.0027.500.5059.507.50
.......................................................................CACAACCTCCTTGAGTGAGCGT.........................22288.500.0020.002.5065.500.50
.......................................................................CACAACCTCCTTGAGTGAGCGAT........................23288.000.5018.504.5060.004.50
......................................................................TCACAACCTCCTTGCGTGAG............................20278.500.008.500.0070.000.00
......................................................................TCACAACCTCCTTGCGTGAGCGA.........................23278.500.0012.001.0065.500.00
......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24269.001.5014.002.5042.009.00
......................................................................TCACAACCTCCTTGAGTGCGC...........................21264.000.007.500.5056.000.00
..........................GACTCACTCAACCTGGGTGT........................................................................20258.500.0020.500.5037.500.00
......................................................................TCACAACCTCCTTGAGCGAGC...........................21255.500.008.500.5046.500.00
......................................................................TCACAACCTCCTTGAGCGAGCG..........................22255.500.0012.500.0043.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23250.000.004.000.5044.501.00
......................................................................TCACAACCTCCTTGAGTGATC...........................21246.000.009.500.0036.500.00
......................................................................TCACAACCTCCTTGAGTGATCG..........................22242.500.009.500.0033.000.00
......................................................................TCACAACCTCCTTGAGTTAGC...........................21241.500.0014.000.0027.500.00
......................................................................TCACAACCTCCTTGAGTGCG............................20239.000.003.500.0035.500.00
.......................................................................CACAACCTCCTTGCGTGAGCG..........................21238.000.003.500.0034.500.00
......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24235.500.506.503.0025.500.00
......................................................................TCACAACCTCCTTGAGTGAGT...........................21235.500.009.500.5025.000.50
......................................................................TCACAACCTCCTTGGGTGAGCG..........................22235.000.007.500.0027.500.00
......................................................................TCACAACCTCCTTGCGTGAGCGT.........................23233.500.003.500.0030.000.00
......................................................................TCACAACCTCCTTGAGTGAGA...........................21231.500.009.500.0021.001.00
......................................................................TCACAACCTCCTTGAGTGGGCG..........................22231.000.007.000.5023.500.00
...........................ACTCACTCAACCTGGGTGT........................................................................19231.000.0014.000.0017.000.00
......................................................................TCACAACCTCCTTGAGTGAGCT..........................22230.500.0010.500.5019.500.00
......................................................................TCACAACCTCCTTGCGTGCGCG..........................22230.500.001.000.0029.500.00
......................................................................TCACAACCTCCGTGAGTGAGC...........................21230.000.004.000.0026.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGTT........................24228.000.006.001.5020.500.00
......................................................................TCACAGCCTCCTTGAGTGAGC...........................21226.500.007.500.0019.000.00
......................................................................TCACAACCTCCTTGAGAGAGCG..........................22226.000.004.000.0022.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGC.........................22225.500.001.000.5024.000.00
......................................................................TCACAACCTCCTTGTGTGAGCG..........................22225.000.001.500.0023.500.00
.......................................................................CACAACCTCCTTGAGTGCGCG..........................21225.000.002.500.0022.500.00
......................................................................TCACAACCTCCTTGAGGGAGCG..........................22224.500.005.500.5018.500.00
......................................................................TCACAACCTCCTTGAGGGAGC...........................21224.000.001.500.0022.500.00
.......................................................................CACAACCTCCTTGCGTGAGCGA.........................22223.000.002.000.0021.000.00
......................................................................TCACAACCTCCTTGAGAGAGC...........................21223.000.003.500.0019.500.00
......................................................................TCACAACCTCCTTGAGTGCGCGA.........................23222.000.002.000.0020.000.00
......................................................................TCACAACCTCCTTGAGTGGGC...........................21221.000.003.000.0017.001.00
......................................................................TCACAACCTCCTTGAGTGACC...........................21220.500.005.500.0015.000.00
......................................................................TCACAACCTCCTTGAGTCAGC...........................21220.500.003.000.5017.000.00
.......................................................................CACAACCTCCTTGAGCGAGCG..........................21220.500.001.500.0019.000.00
......................................................................TCACAACCTCCTTGAGTGAGCA..........................22220.000.006.000.0014.000.00
......................................................................TAACAACCTCCTTGAGTGAGCG..........................22219.500.002.000.0017.500.00
........................................................................ACAACCTCCTTGAGTGAGCGT.........................21219.500.003.500.5013.002.50
......................................................................TCACAGCCTCCTTGAGTGAGCG..........................22219.500.005.500.5013.500.00
......................................................................TCACAACCGCCTTGAGTGAGC...........................21219.500.002.500.0017.000.00
......................................................................TCACAACCTCCGTGAGTGAGCG..........................22219.000.003.000.0016.000.00
........................................................................ACAACCTCCTTGAGTGAG............................18219.000.005.500.0013.500.00
......................................................................TCACAACCTCCTTGGGTGAGC...........................21219.000.004.000.0015.000.00
......................................................................TCACAACCTCCTTGAGTGTGCG..........................22218.500.001.000.0017.500.00
......................................................................TCACAACCTCCTTGAGTAAGC...........................21218.500.009.500.009.000.00
......................................................................TCACGACCTCCTTGAGTGAGC...........................21218.500.005.000.0013.500.00
......................................................................TCGCAACCTCCTTGAGTGAGC...........................21218.000.004.500.0013.500.00
......................................................................TCACAACCTCCCTGAGTGAGC...........................21217.500.005.500.0012.000.00
......................................................................CCACAACCTCCTTGAGTGAGC...........................21217.500.003.500.0014.000.00
......................................................................TCGCAACCTCCTTGAGTGAGCG..........................22217.500.002.500.0015.000.00
......................................................................TCACAACCTCCTTAAGTGAGC...........................21217.000.006.500.0010.500.00
......................................................................TCACAACCTCCTTGAGTTAGCG..........................22217.000.008.500.008.500.00
......................................................................TAACAACCTCCTTGAGTGAGC...........................21217.000.002.500.0014.500.00
.......................................................................CACAACCTCCTTGCGTGAGC...........................20217.000.000.500.0016.500.00
.......................................................................CACAACCTCCTTGAGTGAGCGAA........................23216.500.004.500.5011.500.00
...........................ACTCACTCAACCTGGGTGTGAT.....................................................................22216.501.505.500.008.001.50
......................................................................TCACAAACTCCTTGAGTGAGC...........................21216.000.504.000.0011.500.00
......................................................................TCACAACCTCCTTGAGCGAGCGA.........................23215.500.002.500.5012.500.00
......................................................................TCACAACCTCCTTGACTGAGC...........................21215.500.001.500.0014.000.00
......................................................................TCACAACCTCCTTGAGTGGG............................20215.500.002.500.0013.000.00
......................................................................TCACAACCTCCTCGAGTGAGC...........................21215.000.002.500.0012.500.00
......................................................................TCACAAACTCCTTGAGTGAGCG..........................22215.000.004.000.0011.000.00
......................................................................TCACAACCTCCTTGATTGAGC...........................21214.000.002.000.5010.001.50
......................................................................CCACAACCTCCTTGAGTGAGCG..........................22214.000.003.500.5010.000.00
......................................................................ACACAACCTCCTTGAGTGAGC...........................21214.000.003.000.0011.000.00
......................................................................TCACAATCTCCTTGAGTGAGC...........................21213.500.002.500.0011.000.00
......................................................................TCACAACCGCCTTGAGTGAGCG..........................22213.500.001.000.0012.500.00
......................................................................TCACAACCTCCTTGAGTTAG............................20213.000.004.500.008.500.00
......................................................................TCACAACCTCCCTGAGTGAGCG..........................22213.000.004.000.009.000.00
......................................................................TCACAACCTCCTTTAGTGAGC...........................21213.000.005.000.007.001.00
......................................................................TCACAACCTCCTTGAGTGAGTG..........................22212.500.002.500.0010.000.00
......................................................................TCACAACCTCCTTCAGTGAGC...........................21212.500.003.000.009.500.00
...........................ACTCACTCAACCTGGGTGTGA......................................................................21212.500.004.000.008.000.50
......................................................................TCACCACCTCCTTGAGTGAGC...........................21212.500.002.500.0010.000.00
...........................ACTCACTCAACCTGGGTGTGT......................................................................21212.500.004.500.007.500.50
......................................................................TCACAACCTCCTTAAGTGAGCG..........................22212.000.007.000.005.000.00
......................................................................TCACAACCTCCTCGAGTGAGCG..........................22212.000.003.500.008.500.00
......................................................................TCACAACCTCCTTGAGTGACCG..........................22211.500.001.500.0010.000.00
......................................................................TCACAACCTCCTTGAATGAGC...........................21211.500.005.500.006.000.00
......................................................................TCACACCCTCCTTGAGTGAGC...........................21211.500.001.000.0010.500.00


droEre2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_4929:8848869-8848986 + 98.31
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal NormV040
Embryo
V060
Head
V047
Embryo
V108
Head
......................................................................TCACAACCTCCTTGAGTGAGC...........................21238091.0021.003729.000.0034341.00
......................................................................TCACAACCTCCTTGAGTGAGCG..........................2229461.0016.503586.000.005858.50
......................................................................TCACAACCTCCTTGAGTGAG............................2024929.500.00857.000.004072.50
......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2322570.0033.001022.500.001514.50
.......................................................................CACAACCTCCTTGAGTGAGC...........................2022052.500.50280.500.001771.50
.......................................................................CACAACCTCCTTGAGTGAGCG..........................2121663.501.50523.500.001138.50
.......................................................................CACAACCTCCTTGAGTGAGCGA.........................222997.506.50403.500.00587.50
......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232661.500.50159.500.00501.50
......................................................................TCACAACCTCATTGAGTGAGC...........................212433.000.004.000.00429.00
......................................................................TCACAACCTCCTTGAGTGA.............................192407.000.0052.500.00354.50
......................................................................TCACAACCTCCTTTAGTGAGC...........................212394.000.007.500.00386.50
........................................................................ACAACCTCCTTGAGTGAGC...........................192394.000.0033.500.00360.50
......................................................................TCACAACCTCCTTGAGTTAGC...........................212342.000.5012.000.00329.50
........................................................................ACAACCTCCTTGAGTGAGCGA.........................212281.001.50122.500.00157.00
......................................................................TAACAACCTCCTTGAGTGAGC...........................212251.500.003.000.00248.50
......................................................................TCACAACCTACTTGAGTGAGC...........................212223.000.002.000.00221.00
......................................................................TCACAACCTCCTTGAGTGATC...........................212217.500.5018.500.00198.50
......................................................................TCACAACCTCCTTGAGTGAGA...........................212198.000.0016.000.00182.00
.......................................................................CACAACCTCCTTGAGTGAG............................192178.500.0026.000.00152.50
......................................................................TCACAACATCCTTGAGTGAGC...........................212172.000.001.500.00170.50
........................................................................ACAACCTCCTTGAGTGAGCG..........................202167.500.0061.000.00106.50
......................................................................TCACAACCTCCTTGATTGAGC...........................212127.000.009.500.00117.50
.......................................................................CACAACCTCCTTGAGTGAGCGAT........................23296.501.0030.500.0065.00
......................................................................TCACAACCTCATTGAGTGAGCG..........................22292.500.003.500.0089.00
.......................................................................CACAACCTCCTTGAGTGAGCGT.........................22291.500.0016.500.0075.00
......................................................................TCACAACCTCCTTGCGTGAGCG..........................22290.001.0085.000.004.00
......................................................................TCACAACCTCCTTGAGTTAGCG..........................22287.000.008.500.0078.50
......................................................................TCAAAACCTCCTTGAGTGAGC...........................21283.500.000.000.0083.50
......................................................................TCACAAACTCCTTGAGTGAGC...........................21278.500.003.000.0075.50
..........................GACTCACTCAACCTGGGTGT........................................................................20273.500.509.000.0064.00
......................................................................TCACAACCTCCTTTAGTGAGCG..........................22266.500.004.500.0062.00
......................................................................TCACAACCTCCTTGAGCGAGC...........................21261.500.0014.500.0047.00
......................................................................TCGCAACCTCCTTGAGTGAGC...........................21259.500.007.000.0052.50
......................................................................TCACAACCTCATTGAGTGAG............................20258.500.000.500.0058.00
......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24256.500.0014.500.0042.00
......................................................................TCACAACCTCCTTGAGTGATCG..........................22256.000.0017.000.0039.00
......................................................................TCACAACCTCCTTGAGTTAG............................20255.000.005.500.0049.50
......................................................................TAACAACCTCCTTGAGTGAGCG..........................22251.000.005.000.0046.00
......................................................................CCACAACCTCCTTGAGTGAGC...........................21248.500.003.500.0045.00
......................................................................TCACAACCTCCTTGAGTGAGCT..........................22247.000.0011.500.0035.50
......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24246.500.0011.500.0035.00
......................................................................TCACAACCTCCTCGAGTGAGC...........................21246.000.003.500.0042.50
......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23246.000.5016.500.0029.00
......................................................................TCACAGCCTCCTTGAGTGAGC...........................21246.000.006.500.0039.50
......................................................................TCACAGCCTCCTTGAGTGAGCG..........................22244.500.009.500.0035.00
......................................................................TCACAACCTCCTTGAGTGGGC...........................21244.500.004.500.0040.00
......................................................................TCACAACCTCCTTTAGTGAG............................20244.000.001.500.0042.50
......................................................................TTACAACCTCCTTGAGTGAGC...........................21242.500.002.500.0040.00
......................................................................TCACAACCTCCTTGAGTCAGC...........................21242.000.004.500.0037.50
......................................................................TCCCAACCTCCTTGAGTGAGC...........................21241.500.000.500.0041.00
......................................................................TCACAACCTACTTGAGTGAGCG..........................22241.500.000.500.0041.00
........................................................................ACAACCTCCTTGAGTGAG............................18241.000.0010.000.0031.00
...........................ACTCACTCAACCTGGGTGT........................................................................19241.000.005.000.0036.00
......................................................................TCACAACCTCCCTGAGTGAGC...........................21240.500.004.500.0036.00
......................................................................TCACAACCTCCTTGGGTGAGC...........................21240.500.004.000.0036.50
......................................................................TCACAACCTCCTTGAGTGACC...........................21240.000.003.500.0036.50
......................................................................TCACGACCTCCTTGAGTGAGC...........................21239.500.004.000.0035.50
......................................................................TCACAACCTCCTTGAGTAAGC...........................21237.500.002.500.0035.00
......................................................................TCACAACCTCCTTGAGTGCGCG..........................22236.500.5032.000.004.00
......................................................................TCACAACCTCCTTGAGTGAGT...........................21236.500.0011.000.0025.50
...........................ACTCACTCAACCTGGGTGTGAT.....................................................................22235.500.009.000.0026.50
......................................................................TCACAACCCCCTTGAGTGAGC...........................21235.000.002.500.0032.50
......................................................................TCACAACCTCCTTGAGTGAGCA..........................22234.500.0017.000.0017.50
......................................................................TCACAACCTCCTTGAGTGCGC...........................21234.500.0020.000.0014.50
......................................................................TCACAACCTCCTTGCGTGAGC...........................21234.000.0021.000.0013.00
......................................................................TCACAACCTCTTTGAGTGAGC...........................21233.000.007.000.0026.00
......................................................................TCACAACATCCTTGAGTGAGCG..........................22232.500.002.000.0030.50
......................................................................TCACAACCTCCTTGAGTGAGAG..........................22232.000.008.500.0023.50
.....................................................................CTCACAACCTCCTTGAGTGAGC...........................22231.500.003.500.0028.00
......................................................................TCACAACCTCCTTGACTGAGC...........................21231.000.004.500.0026.50
......................................................................TAACAACCTCCTTGAGTGAG............................20229.000.000.500.0028.50
......................................................................TCATAACCTCCTTGAGTGAGC...........................21229.000.001.000.0028.00
......................................................................TCACAACCTACTTGAGTGAG............................20228.500.000.500.0028.00
......................................................................TCACAACCTCCTTGAGTTAGCGA.........................23227.000.003.500.0023.50
......................................................................TCACAACCTCCTTGCGTGAGCGA.........................23226.501.0023.500.002.00
......................................................................TCACAACCTCCTTAAGTGAGC...........................21226.000.004.500.0021.50
......................................................................TCTCAACCTCCTTGAGTGAGC...........................21226.000.000.500.0025.50
.......................................................................CACAACCTCCTTGAGTGAGCGAA........................23225.500.008.000.0017.50
......................................................................TCAGAACCTCCTTGAGTGAGC...........................21225.000.001.500.0023.50
.......................................................................CACAACCTCATTGAGTGAGC...........................20225.000.000.500.0024.50
......................................................................TCACAACCTCCTTGAGTGAT............................20224.000.002.500.0021.50
...........................ACTCACTCAACCTGGGTGTGT......................................................................21224.000.004.000.0020.00
......................................................................TCACAACCTTCTTGAGTGAGC...........................21223.500.001.500.0022.00
......................................................................TCACCACCTCCTTGAGTGAGC...........................21223.000.001.500.0021.50
......................................................................TCACAACCTCCTTGAGCGAGCG..........................22222.000.0014.500.007.50
......................................................................TCACAACCTCCTTGATTGAGCG..........................22222.000.003.500.0018.50
......................................................................TCACAACATCCTTGAGTGAG............................20220.500.000.500.0020.00
......................................................................TCACAACCTCCTTGAGTGAGCGTT........................24220.000.005.500.0014.50
......................................................................TCACAATCTCCTTGAGTGAGC...........................21220.000.001.000.0019.00
......................................................................TCACAACCTCCTTGAGTGGGCG..........................22220.000.0010.000.0010.00
......................................................................TCACAACCTCCTTGAGTGAGCC..........................22220.000.504.000.0015.50
.......................................................................CACAACCTCCTTTAGTGAGC...........................20220.000.000.000.0020.00
......................................................................TCACAACCTCCTTGAGTGAGCGG.........................23219.500.001.500.0018.00
......................................................................TCACAACCTCCTTGAGGGAGC...........................21219.500.506.500.0012.50
......................................................................ACACAACCTCCTTGAGTGAGC...........................21219.000.003.500.0015.50
.......................................................................AACAACCTCCTTGAGTGAGC...........................20219.000.001.000.0018.00
......................................................................TCACxACCTCCTTGAGTGAGC...........................20219.000.000.000.0019.00
......................................................................TCACAACCTCATTGAGTGAGCGA.........................23218.500.000.000.0018.50
.......................................................................CACAACCTCCTTGAGTTAGCG..........................21218.500.001.000.0017.50
.......................................................................CACAACCTCCTTGAGTTAGC...........................20218.500.000.000.0018.50
.......................................................................CACAGCCTCCTTGAGTGAGCG..........................21218.500.000.500.0018.00


droFic1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000453858:1204370-1204487 + 89.97
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
GGGGCTAGAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTACCCACGGATC
SizeHit CountTotal Norm


droEug1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000409209:654058-654175 + 98.31
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal Norm


droBia1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000301506:1211778-1211895 + 97.47
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCCTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal Norm


droTak1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000415866:192891-193008 + 97.47
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCATCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal Norm


droEle1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000491107:1596303-1596420 + 96.64
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAATC
SizeHit CountTotal Norm


droRho1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000777217:399444-399561 - 98.31
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal Norm


droKik1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scf7180000302476:911423-911540 - 96.64
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
GAGTTAGCCGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
SizeHit CountTotal Norm


droAna3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 scaffold_13266:12795467-12795585 - 94.2
AAGTTAGCAGCATT-TTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCAGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
SizeHit CountTotal NormV105
Male body
V106
Head
V055
Unknown
V039
Embryo
.......................................................................TCACAACCTCCTTGAGTGAGC...........................21258594.00352.5052456.005779.006.50
.......................................................................TCACAACCTCCTTGAGTGAGCG..........................2227267.50766.002594.503905.002.00
.......................................................................TCACAACCTCCTTGAGTGAG............................2025531.0093.504046.001391.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2323058.50756.50739.501557.005.50
........................................................................CACAACCTCCTTGAGTGAGC...........................2022477.0078.001766.00633.000.00
........................................................................CACAACCTCCTTGAGTGAGCG..........................2121263.00147.00397.00719.000.00
........................................................................CACAACCTCCTTGAGTGAGCGA.........................2221066.50203.50200.50661.001.50
.......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232945.0092.00566.00287.000.00
.......................................................................TCACAACCTCCTTGAGTGATC...........................212902.502.50866.0034.000.00
.......................................................................TCACAACCTCCTTGAGTGA.............................192650.001.50434.00214.000.50
.......................................................................TCACAACCTCCTTGAGTGAGA...........................212649.503.50622.5023.500.00
.......................................................................TCACAACCTACTTGAGTGAGC...........................212303.000.00291.0012.000.00
.......................................................................TCACAACCTCCTTGAGTTAGC...........................212298.502.50283.0013.000.00
...........................GACTCACTCAACCTGGGTGT........................................................................202286.0010.00217.0059.000.00
.......................................................................TCACAACCTCCTTTAGTGAGC...........................212275.000.50266.008.500.00
.........................................................................ACAACCTCCTTGAGTGAGCGA.........................212271.5031.5055.50183.501.00
.......................................................................TAACAACCTCCTTGAGTGAGC...........................212252.001.50221.0029.500.00
.......................................................................TCACAACCTCATTGAGTGAGC...........................212236.503.50216.0017.000.00
.........................................................................ACAACCTCCTTGAGTGAGC...........................192193.001.00107.0085.000.00
.......................................................................TCACAACCTCCTTGAGTGAGT...........................212191.003.00157.5030.500.00
........................................................................CACAACCTCCTTGAGTGAG............................192159.002.0098.5058.500.00
.......................................................................TCGCAACCTCCTTGAGTGAGC...........................212156.500.00147.009.500.00
.......................................................................TCACAACATCCTTGAGTGAGC...........................212150.500.00132.5018.000.00
.......................................................................TCACAACCTCCTTGAGCGAGC...........................212137.000.5074.0062.000.50
.........................................................................ACAACCTCCTTGAGTGAGCG..........................202137.0011.0033.5092.500.00
........................................................................CACAACCTCCTTGAGTGAGCGT.........................222133.5014.5069.5049.500.00
........................................................................CACAACCTCCTTGAGTGAGCGAT........................232114.0020.5033.0059.501.00
.......................................................................TCACAGCCTCCTTGAGTGAGC...........................21295.001.5080.5013.000.00
............................ACTCACTCAACCTGGGTGT........................................................................19291.500.0029.0062.500.00
.......................................................................TCACAGCCTCCTTGAGTGAGCG..........................22287.000.5075.5011.000.00
.......................................................................CCACAACCTCCTTGAGTGAGC...........................21285.500.0070.5015.000.00
.......................................................................TCACAACCTCCTTGAGTGGGC...........................21277.500.5062.0015.000.00
.......................................................................TCACAACCTCCTTGGGTGAGC...........................21272.000.0066.006.000.00
.......................................................................TCACAACCTCCTCGAGTGAGC...........................21272.000.5061.5010.000.00
.......................................................................TCACAACCTCCCTGAGTGAGC...........................21271.000.5051.5019.000.00
.......................................................................TCACAACCTCCTTGATTGAGC...........................21270.501.5055.5013.500.00
.......................................................................TCACAACCTCCTTGAGTGATCG..........................22269.004.5040.5024.000.00
.......................................................................TCACGACCTCCTTGAGTGAGC...........................21265.500.0056.509.000.00
.......................................................................TCACAACCTCCTTGAGTGACC...........................21265.500.0039.0026.500.00
.......................................................................TCACAACCTCCTTGAGCGAGCG..........................22265.001.504.5059.000.00
.......................................................................TTACAACCTCCTTGAGTGAGC...........................21263.501.0057.505.000.00
.......................................................................TCACAACCTCCTTGCGTGAGCG..........................22262.000.501.0060.500.00
.......................................................................TCACAACCTCCTTGAGTGAGG...........................21261.502.0057.002.500.00
.......................................................................TCACAACCTCCTTGAGTCAGC...........................21261.000.0031.5029.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCT..........................22260.508.0028.0023.501.00
.......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24259.5011.5025.0023.000.00
.......................................................................TCACAACCCCCTTGAGTGAGC...........................21258.500.5048.0010.000.00
.......................................................................TCACAACCTCCTTGAGTAAGC...........................21256.001.0047.507.500.00
.......................................................................TCACAATCTCCTTGAGTGAGC...........................21255.500.0048.507.000.00
............................ACTCACTCAACCTGGGTGTGT......................................................................21255.001.0044.509.500.00
.......................................................................TCACAACCTTCTTGAGTGAGC...........................21254.500.0051.003.500.00
.......................................................................TCACAACCTCCTTGAGTGAT............................20253.501.0049.503.000.00
.......................................................................TCACAACCTCCTTGAGAGAGC...........................21249.000.0021.5027.500.00
.......................................................................TCACAACCTCCTTGAGTGAGAG..........................22248.5017.5024.506.500.00
.......................................................................TCACAAACTCCTTGAGTGAGC...........................21248.500.5022.5025.500.00
.......................................................................TCACAACCTCCTTGACTGAGC...........................21246.000.5016.0029.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCGTT........................24245.003.0024.5017.500.00
.......................................................................TCATAACCTCCTTGAGTGAGC...........................21244.000.0040.004.000.00
.......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24243.007.5015.5019.001.00
.......................................................................TCACAACCTCCTTGAGTTAG............................20242.500.0037.505.000.00
.......................................................................TCACAACCTCCTTGAGTGCGC...........................21241.500.0012.5029.000.00
.......................................................................TCACAACCTCCTTTAGTGATC...........................21241.000.5040.000.500.00
.......................................................................TCAAAACCTCCTTGAGTGAGC...........................21240.000.5026.0013.500.00
.......................................................................TCACAACCTCCTTCAGTGAGC...........................21239.001.0022.5015.500.00
.......................................................................TCACAACCTCTTTGAGTGAGC...........................21237.500.0030.507.000.00
.......................................................................TCACAACTTCCTTGAGTGAGC...........................21236.000.0030.006.000.00
.......................................................................TCACAACCTCCTTGAGGGAGC...........................21235.500.0015.5020.000.00
.......................................................................TCACAACCTCCTTGAATGAGC...........................21235.001.0027.506.500.00
.......................................................................TCACAACCTCCTTAAGTGAGC...........................21234.501.0024.009.500.00
.......................................................................TAACAACCTCCTTGAGTGAGCG..........................22234.504.5014.0016.000.00
........................................................................CACAACCTCCTTGAGTGATC...........................20233.500.0031.002.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCA..........................22233.005.0010.0018.000.00
.......................................................................TCACxACCTCCTTGAGTGAGC...........................20231.000.0031.000.000.00
.......................................................................ACACAACCTCCTTGAGTGAGC...........................21231.000.0013.0018.000.00
.......................................................................TCACAACCTCCTTGAGAGAGCG..........................22231.000.502.0028.500.00
.......................................................................TCACAACCTCCGTGAGTGAGC...........................21230.001.001.0028.000.00
.......................................................................TCACAACCTCCTTGCGTGAGC...........................21230.000.508.5021.000.00
............................ACTCACTCAACCTGGGTGTGA......................................................................21230.000.5016.5013.000.00
.......................................................................TCACAACCTCCTTTAGTGAG............................20229.500.0025.504.000.00
.......................................................................TCACAACCGCCTTGAGTGAGC...........................21229.500.501.5027.500.00
.......................................................................TCACAACCTACTTGAGTGAG............................20229.000.0023.505.500.00
.......................................................................TCACAACCTCCTTGAGTGCGCG..........................22229.000.001.0028.000.00
.......................................................................GCACAACCTCCTTGAGTGAGC...........................21228.000.006.0022.000.00
.......................................................................TCACAACCTCATTGAGTGAGCG..........................22226.002.5013.5010.000.00
.......................................................................TCACAACCTCCTTGAGTGAAC...........................21223.500.0020.003.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23223.500.501.0022.000.00
.......................................................................TCACAACCTCCTTGAGTTAGCG..........................22223.502.5013.008.000.00
.......................................................................TCACAACCTCCTTGAGTGGGCG..........................22223.000.009.0014.000.00
............................ACTCACTCAACCTGGGTGTGAT.....................................................................22222.500.5012.509.000.50
.......................................................................TCACAACCTCCTTTAGTGAGCG..........................22221.501.0014.006.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCC..........................22221.500.5012.009.000.00
.......................................................................TCACAGCCTCCTTGAGTGAGCGA.........................23221.500.5012.009.000.00
........................................................................CACAGCCTCCTTGAGTGAGCG..........................21221.500.0019.002.500.00
.......................................................................TCACAACCTCCTTGCGTGAGCGA.........................23221.000.501.0019.500.00
.......................................................................TCACAACCTACTTGAGTGAGCG..........................22220.504.0012.004.500.00
.......................................................................TCACAACCTCCTTGAGTGAGTG..........................22220.004.508.507.000.00
.......................................................................TCACAACCTCCTTGAGCGAG............................20220.000.006.0014.000.00
.......................................................................TCACAACATCCTTGAGTGAGCG..........................22219.500.504.0015.000.00
........................................................................CACAACCTCCTTGAGTGAGCGAA........................23219.502.509.507.500.00
.......................................................................TCACCACCTCCTTGAGTGAGC...........................21218.500.5010.507.500.00
.......................................................................TCACAACCGCCTTGAGTGAGCG..........................22218.500.000.0018.500.00


droBip1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scf7180000396730:1128124-1128242 + 93.38
AAGTTAGCAGCATT-TTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTAGCCGCCTTTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACAAGAC
SizeHit CountTotal Norm


dp4 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 chr3:14135687-14135806 - 89.42
AAGTTA--GCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTCGGGTCGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
SizeHit CountTotal NormV112
Male body
V043
Embryo
V051
Head
M022
Male body
........................................................................TCACAACCTCCTTGAGTGAGCG..........................2227367.00301.5031.007034.000.50
........................................................................TCACAACCTCCTTGAGTGAGC...........................2127079.00240.5062.006775.501.00
........................................................................TCACAACCTCCTTGAGTGAGCGA.........................2323033.00183.5096.502752.500.50
........................................................................TCACAACCTCCTTGAGTGAG............................2022279.5041.002.502236.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGT.........................232730.5035.500.00695.000.00
.........................................................................CACAACCTCCTTGAGTGAGCG..........................212654.5031.000.00622.501.00
.........................................................................CACAACCTCCTTGAGTGAGCGA.........................222574.0026.009.00539.000.00
.........................................................................CACAACCTCCTTGAGTGAGC...........................202455.5020.501.00434.000.00
..........................................................................ACAACCTCCTTGAGTGAGCGA.........................212205.007.506.50191.000.00
........................................................................TCACAACCTCCTTGAGTGA.............................192164.500.001.50163.000.00
..........................................................................ACAACCTCCTTGAGTGAGCG..........................202103.503.500.5099.500.00
........................................................................TCACAACCTCCTTGCGTGAGCG..........................22278.500.000.0078.500.00
..........................................................................ACAACCTCCTTGAGTGAGC...........................19270.500.501.0069.000.00
.........................................................................CACAACCTCCTTGAGTGAG............................19264.500.000.0064.500.00
.........................................................................CACAACCTCCTTGAGTGAGCGAT........................23258.003.002.0053.000.00
........................................................................TCACAACCTCCTTGAGCGAGCG..........................22255.000.000.5054.500.00
.........................................................................CACAACCTCCTTGAGTGAGCGT.........................22249.506.500.5042.500.00
........................................................................TCACAACCTCCTTGAGCGAGC...........................21247.000.001.0046.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGC.........................23232.501.000.5031.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGAT........................24231.505.001.5024.500.50
........................................................................TCACAACCTCCTTGCGTGAGCGA.........................23231.500.001.5030.000.00
........................................................................TCACAACCTCCTTGAGAGAGCG..........................22228.500.000.5028.000.00
........................................................................TCACAACCTCCTTGAGAGAGC...........................21225.500.000.0025.500.00
........................................................................TCACAACCTCCTTGAGTGAGCGAA........................24225.503.500.0022.000.00
.............................ACTCACTCAACCTGGGTGT........................................................................19224.500.000.0024.500.00
........................................................................TCACAACCTCCTTGCGTGAGC...........................21223.500.000.0023.500.00
........................................................................TCACAACCTCCTTGAGTGAGA...........................21223.500.000.5022.500.50
........................................................................TCACAACCTCCTTGCGTGAG............................20223.000.000.0023.000.00
........................................................................TCACAACCTCCTTGAGTGCGCG..........................22222.000.001.0021.000.00
........................................................................TCACAACCTCCTTGAGTGAGCA..........................22221.000.000.0021.000.00
.............................ACTCACTCAACCTGGGTGTGAT.....................................................................22220.000.002.5017.500.00
........................................................................TCGCAACCTCCTTGAGTGAGC...........................21219.500.500.0019.000.00
........................................................................TCACAACCTCCTTGAGTGAGT...........................21219.000.500.0018.500.00
........................................................................TCGCAACCTCCTTGAGTGAGCG..........................22218.000.000.0018.000.00
........................................................................TCACAACCTCCTTGAGTGATCG..........................22216.500.500.0016.000.00
........................................................................TCACAACCTCCTTGAGTCAGC...........................21216.500.001.0015.500.00
........................................................................TCACAACCTCCTTGAGCGAG............................20216.000.000.0016.000.00
........................................................................TCACAACCTCCTTGAGTGATC...........................21215.500.000.0015.500.00
........................................................................TCACAACCTCCTTGAGTGAGCT..........................22215.501.000.0014.500.00
........................................................................TCACAACCTCCTTGAGTGAGCGTT........................24215.501.500.0014.000.00
..........................................................................ACAACCTCCTTGAGTGAG............................18215.500.500.0015.000.00
.............................ACTCACTCAACCTGGGTGTGATG....................................................................23214.000.503.5010.000.00
........................................................................TCACAACCTCCTTGAGTGCGC...........................21214.000.500.0013.500.00
........................................................................TCACAACCTCCTTGAGCGAGCGA.........................23213.500.500.5012.500.00
........................................................................TCACAACCTCCTTGAGTGGGCG..........................22213.500.500.5012.500.00
........................................................................TCACAACCTCCTTGAGTAAGCG..........................22213.000.500.5012.000.00
........................................................................TCACAACCTCCTTGGGTGAGCG..........................22213.000.000.0013.000.00
........................................................................TCACAACCTCCTTGACTGAGC...........................21212.500.000.0012.500.00
........................................................................TCACAACCTCCGTGAGTGAGC...........................21212.500.000.5012.000.00
........................................................................TCCCAACCTCCTTGAGTGAGCG..........................22212.000.000.0012.000.00
........................................................................TCACAACCTCCTTGAGTGCG............................20212.000.000.0012.000.00
........................................................................TCACAACCTCCTTGAGTGAGAG..........................22212.000.000.5011.500.00
........................................................................TCACAACCTCCTTGAGGGAGC...........................21212.000.000.5011.500.00
........................................................................TCACAGCCTCCTTGAGTGAGCG..........................22211.500.000.0011.500.00
........................................................................TCACAGCCTCCTTGAGTGAGC...........................21211.500.000.0011.500.00
............................GACTCACTCAACCTGGGTGT........................................................................20211.501.000.0010.500.00
........................................................................TCACAACCTCCTTGAGGGAGCG..........................22211.500.500.0011.000.00
........................................................................TAACAACCTCCTTGAGTGAGC...........................21211.000.000.0011.000.00
........................................................................TCACAACCTCCGTGAGTGAGCG..........................22211.000.000.0011.000.00
........................................................................CCACAACCTCCTTGAGTGAGCG..........................22211.000.000.0011.000.00
........................................................................TCACGACCTCCTTGAGTGAGCG..........................22211.000.500.0010.500.00
........................................................................CCACAACCTCCTTGAGTGAGC...........................21211.000.000.0011.000.00
........................................................................TCACAACCTCCTTGGGTGAGC...........................21210.500.000.5010.000.00
........................................................................TCACAACCTCCCTGAGTGAGCG..........................22210.500.500.0010.000.00
........................................................................TCACAACCCCCTTGAGTGAGCG..........................22210.500.000.0010.500.00
........................................................................TCACAACCTCCTTGAGAGAGCGA.........................23210.500.000.5010.000.00
........................................................................TCACAACCTCCTTGAGTGACC...........................21210.500.000.0010.500.00
........................................................................TCACAACATCCTTGAGTGAGCG..........................22210.000.500.509.000.00
........................................................................TCACAACCTCCTTGAGTCAGCG..........................22210.000.000.0010.000.00
........................................................................TCACAACCTCCTTAAGTGAGC...........................21210.000.001.009.000.00
........................................................................TCCCAACCTCCTTGAGTGAGC...........................21210.000.000.0010.000.00
........................................................................TCACAAACTCCTTGAGTGAGC...........................2129.500.000.009.500.00
........................................................................TCACAACCTCCTTCAGTGAGC...........................2129.500.000.009.500.00
..........................................................................ACAACCTCCTTGAGTGAGCGT.........................2129.500.500.009.000.00
........................................................................TCACGACCTCCTTGAGTGAGC...........................2129.500.500.009.000.00
........................................................................TCACAACCTCCTTGAGTGGGC...........................2129.500.500.508.500.00
........................................................................TCACAACCTACTTGAGTGAGC...........................2128.500.000.508.000.00
........................................................................TCACAACCTCCTTGAGTAAGC...........................2128.500.500.008.000.00
........................................................................TCACAACCTCATTGAGTGAGCG..........................2228.500.000.008.500.00
.......................................................................CTCACAACCTCCTTGAGTGAGCG..........................2328.500.500.008.000.00
.........................................................................CACAACCTCCTTGAGTGAGCGAA........................2328.500.000.508.000.00
........................................................................TAACAACCTCCTTGAGTGAGCG..........................2228.500.000.008.500.00
........................................................................ACACAACCTCCTTGAGTGAGCG..........................2228.000.500.007.500.00
........................................................................TAACAACCTCCTTGAGTGAGCGA.........................2328.000.000.008.000.00
........................................................................TCACAACCTCCTTGAGTTAGC...........................2128.000.000.008.000.00
........................................................................TCACAACCTCCTTGAGTGACCG..........................2228.000.000.008.000.00
.............................ACTCACTCAACCTGGGTGTGA......................................................................2128.000.000.507.500.00
.........................................................................CACAACCTCCTTGAGCGAGCG..........................2127.500.000.007.500.00
........................................................................TCACAACCTCTTTGAGTGAGC...........................2127.500.000.007.500.00
........................................................................TCACAACCTCCTTGAGTCAG............................2027.500.000.007.500.00
........................................................................TCACAACCTCCTCGAGTGAGC...........................2127.500.500.007.000.00
........................................................................TCACAACCTCCTTGAGTGAGTG..........................2227.500.000.007.500.00
........................................................................TCACAACCTCCGTGAGAGAGC...........................2127.500.000.007.500.00
........................................................................TCACAACCTCCTTGCGTGAGCGT.........................2327.500.000.007.500.00
........................................................................TCACAACCTCCTCGAGTGAGCG..........................2227.500.000.007.500.00
........................................................................TCACAACCTCCTTAAGTGAGCG..........................2227.000.000.007.000.00
........................................................................TCACAACCTCCCTGAGTGAGC...........................2127.000.000.007.000.00
........................................................................TCACAATCTCCTTGAGTGAGCG..........................2227.000.000.007.000.00
........................................................................TCTCAACCTCCTTGAGTGAGCG..........................2227.000.000.007.000.00
........................................................................TCACAACCTCCTTGAGTGAGCAA.........................2327.000.500.006.500.00
.........................................................................CACAACCTCCTTGCGTGAGCG..........................2127.000.000.007.000.00


droPer1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
1 super_4:1183061-1183180 + 89.42
AAGTTA--GCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAGTTCGGGTCGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
SizeHit CountTotal NormV111
Male body
V042
Embryo
V050
Head
V057
Head
M021
Embryo
........................................................................TCACAACCTCCTTGAGTGAGCG..........................22213703.50233.0011.505964.007495.000.00
........................................................................TCACAACCTCCTTGAGTGAGC...........................21211526.50199.5021.505433.005871.001.50
........................................................................TCACAACCTCCTTGAGTGAGCGA.........................2324927.50225.5033.502124.502543.500.50
........................................................................TCACAACCTCCTTGAGTGAG............................2024035.0055.500.501542.502436.500.00
........................................................................TCACAACCTCCTTGAGTGAGCGT.........................2321713.0059.000.00542.001112.000.00
.........................................................................CACAACCTCCTTGAGTGAGCG..........................2121464.5029.500.50520.00912.502.00
.........................................................................CACAACCTCCTTGAGTGAGCGA.........................2221136.5032.502.00482.00619.500.50
.........................................................................CACAACCTCCTTGAGTGAGC...........................202974.0018.500.00282.50673.000.00
..........................................................................ACAACCTCCTTGAGTGAGCGA.........................212383.5010.501.00150.00221.500.50
........................................................................TCACAACCTCCTTGAGTGA.............................192313.501.000.50109.00203.000.00
..........................................................................ACAACCTCCTTGAGTGAGCG..........................202165.001.000.5066.5097.000.00
........................................................................TCACAACCTCCTTGCGTGAGCG..........................222160.000.500.0068.0091.500.00
.........................................................................CACAACCTCCTTGAGTGAG............................192159.500.000.0042.50117.000.00
........................................................................TCACAACCTCCTTGAGCGAGCG..........................222148.500.000.0043.00105.500.00
.........................................................................CACAACCTCCTTGAGTGAGCGT.........................222139.005.000.0030.00104.000.00
..........................................................................ACAACCTCCTTGAGTGAGC...........................192135.501.000.0059.5075.000.00
.........................................................................CACAACCTCCTTGAGTGAGCGAT........................232133.004.000.5045.5083.000.00
........................................................................TCACAACCTCCTTGAGCGAGC...........................212100.500.000.0034.5066.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGC.........................23285.002.000.0021.0062.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGAT........................24281.004.500.0036.5039.001.00
........................................................................TCACAACCTCCTTGAGAGAGCG..........................22268.002.000.0019.5046.500.00
........................................................................TCACAACCTCCTTGAGTGATCG..........................22255.500.000.5014.0041.000.00
........................................................................TCACAACCTCCTTGAGTGAGA...........................21254.002.000.0024.5027.500.00
........................................................................TCACAACCTCCTTGAGTGAGCGAA........................24254.002.000.0023.0029.000.00
........................................................................TCACAGCCTCCTTGAGTGAGCG..........................22251.000.000.0036.0015.000.00
........................................................................TCACAACCTCCTTGAGAGAGC...........................21250.000.500.0019.0030.500.00
........................................................................TCACAACCTCCTTGAGTGCGCG..........................22250.000.000.0023.0027.000.00
........................................................................TCACAACCTCCTTGAGTGAGT...........................21246.500.500.0010.5035.500.00
........................................................................TCACAACCTCCTTGAGTGAGCGTT........................24245.001.000.0013.0031.000.00
........................................................................TCACAACCTCCTTGCGTGAGCGA.........................23244.500.000.0018.5026.000.00
........................................................................TCACAGCCTCCTTGAGTGAGC...........................21244.000.000.0029.0015.000.00
........................................................................TCACAACCTCCTTGACTGAGC...........................21243.500.000.508.0035.000.00
........................................................................TCACAACCTCCTTGAGTGAGCT..........................22242.501.000.0012.5029.000.00
........................................................................TCACAACCTCCTTGCGTGAG............................20241.500.000.0018.0023.500.00
..........................................................................ACAACCTCCTTGAGTGAG............................18240.500.000.0015.5025.000.00
........................................................................TCACAACCGCCTTGAGTGAGCG..........................22239.000.000.003.0036.000.00
........................................................................TCACAACCTCCTTGAGCGAGCGA.........................23239.000.500.5010.5027.500.00
........................................................................TAACAACCTCCTTGAGTGAGCG..........................22239.000.000.007.0032.000.00
........................................................................TCACAACCTCCTTGAGCGAG............................20238.000.000.0011.5026.500.00
........................................................................TCACAACCTCCTTGCGTGAGC...........................21237.500.000.0015.5022.000.00
........................................................................TCACAACCTCCTTGGGTGAGCG..........................22237.000.000.0012.0025.000.00
........................................................................TCACAACCTCCTTGAGTGATC...........................21236.000.500.008.0027.500.00
........................................................................TAACAACCTCCTTGAGTGAGC...........................21235.500.000.004.5031.000.00
........................................................................TCACAACCTCCTTGAGTGACCG..........................22235.500.000.0010.0025.500.00
........................................................................TCACAACCTCCGTGAGTGAGC...........................21234.500.000.006.5028.000.00
........................................................................TCACAACCTCCTTGAGTGGGCG..........................22234.500.000.0010.5024.000.00
........................................................................TCACAACCTCCTTGAGTGAGCA..........................22234.001.500.0013.5019.000.00
........................................................................TCACAACCTCCTTGAGTCAGC...........................21232.500.500.007.5024.500.00
........................................................................TCACAACCTCCTTGAGTGACC...........................21232.500.500.0011.5020.500.00
........................................................................TCACAACCTCCTTGTGTGAGCG..........................22232.500.000.006.0026.500.00
........................................................................TCACAACCTCCGTGAGTGAGCG..........................22231.000.000.004.5026.500.00
........................................................................TCACAACCGCCTTGAGTGAGC...........................21230.500.000.005.0025.500.00
.............................ACTCACTCAACCTGGGTGT........................................................................19230.000.000.009.5020.500.00
........................................................................TCACAAACTCCTTGAGTGAGCG..........................22229.000.000.007.0022.000.00
.............................ACTCACTCAACCTGGGTGTGAT.....................................................................22229.001.000.5016.0011.500.00
............................GACTCACTCAACCTGGGTGT........................................................................20227.500.500.006.0021.000.00
........................................................................TCACGACCTCCTTGAGTGAGCG..........................22226.000.000.009.0017.000.00
........................................................................TCACAACATCCTTGAGTGAGCG..........................22225.500.000.006.0019.500.00
........................................................................TCACAACCTCCCTGAGTGAGC...........................21225.000.500.007.5017.000.00
........................................................................TCACAACCTCCCTGAGTGAGCG..........................22224.500.500.507.0016.500.00
........................................................................TCACAACCTCCTTGAGGGAGCG..........................22224.500.000.006.5018.000.00
........................................................................TCACAACCTCCTCGAGTGAGCG..........................22223.000.000.007.5015.500.00
........................................................................TCACAACCTCCTCGAGTGAGC...........................21222.500.000.005.5017.000.00
..........................................................................ACAACCTCCTTGAGTGAGCGT.........................21222.500.000.008.0014.500.00
........................................................................TCACAACCTCCTTCAGTGAGC...........................21222.001.000.004.0017.000.00
........................................................................TCACAACCTCCTTGAGTGAGAG..........................22222.000.000.0014.507.500.00
........................................................................TCACAACCTCCTTGAGTGAGCC..........................22222.000.000.006.5015.500.00
........................................................................CCACAACCTCCTTGAGTGAGCG..........................22221.500.500.005.0016.000.00
........................................................................TCACAGCCTCCTTGAGTGAGCGA.........................23221.000.500.0010.0010.500.00
.............................ACTCACTCAACCTGGGTGTGATG....................................................................23220.500.000.008.0012.500.00
........................................................................TCACAACCTCCTTGACTGAGCG..........................22220.500.000.006.0014.500.00
........................................................................TCACAAACTCCTTGAGTGAGC...........................21220.500.000.005.5015.000.00
.........................................................................CACAACCTCCTTGAGCGAGCG..........................21219.500.500.004.5014.500.00
.............................ACTCACTCAACCTGGGTGTGA......................................................................21219.000.000.006.5012.500.00
........................................................................TCACAACCTCCTTGAGTGCGC...........................21219.000.000.008.0011.000.00
........................................................................TCACAATCTCCTTGAGTGAGCG..........................22219.000.500.005.5013.000.00
........................................................................TCACAACCTCCTTGAGAGAG............................20218.500.500.006.5011.500.00
........................................................................TCACAACCTCCTTGAGTGCGCGA.........................23218.500.000.006.5012.000.00
........................................................................TCACAACCTCCTTGCGTGAGCGT.........................23218.500.000.002.0016.500.00
........................................................................CCACAACCTCCTTGAGTGAGC...........................21218.500.500.009.508.500.00
........................................................................TCACAACCTCCTTGAGTGTGCG..........................22218.000.000.004.5013.500.00
........................................................................TCACACCCTCCTTGAGTGAGCG..........................22218.000.000.0012.006.000.00
........................................................................ACACAACCTCCTTGAGTGAGCG..........................22218.000.000.004.5013.500.00
........................................................................TCACAACCTCCTTGAGAGAGCGA.........................23217.500.500.005.0012.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGG.........................23217.500.000.006.0011.500.00
........................................................................TCACAACCTCCTTGAGTTAGCG..........................22217.500.000.008.509.000.00
........................................................................TCACAACCTCATTGAGTGAGC...........................21217.000.000.005.0012.000.00
........................................................................TCACAACCGCCTTGAGTGAG............................20217.000.000.001.0016.000.00
........................................................................TCACAACCGCCTTGAGTGAGCGA.........................23217.000.000.002.0015.000.00
........................................................................TCACAACATCCTTGAGTGAGC...........................21217.000.000.002.5014.500.00
........................................................................TCACAACCTCCTTGAGGGAGC...........................21217.000.000.003.5013.500.00
........................................................................TCACAACCTCATTGAGTGAGCG..........................22217.000.500.003.5013.000.00
........................................................................TCGCAACCTCCTTGAGTGAGC...........................21216.500.000.006.0010.500.00
........................................................................ACACAACCTCCTTGAGTGAGC...........................21216.500.500.002.0014.000.00
........................................................................TCACAACCTCCTTGAGTTAGC...........................21216.500.000.005.0011.500.00
........................................................................TCACAACCTCCTTGAGTGCG............................20216.000.000.005.0011.000.00
........................................................................TCACAACCTCCTTGAGTAAGCG..........................22216.000.500.008.007.500.00
........................................................................TCACAACCTCCTTGAGTCAGCG..........................22215.500.000.002.5013.000.00
........................................................................TCACAACCTCCTTGAGTGAGTG..........................22215.500.000.004.5011.000.00
........................................................................TCACAACCTCCTTGAGTGGGC...........................21215.500.000.506.009.000.00
........................................................................TCACAACCCCCTTGAGTGAGCG..........................22215.500.000.003.5012.000.00


droWil1 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_180701:3433650-3433765 - 87.47
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTT-CGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
---TTAACA-CATTTTGCCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTATAATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGT
SizeHit CountTotal NormV117
Male body
V118
Embryo
V119
Head
M020
Head
.......................................................................TCACAACCTCCTTGAGTGAGC...........................21245650.50217.50241.5044429.50762.00
.......................................................................TCACAACCTCCTTGAGTGAG............................2023944.0054.0025.503745.50119.00
.......................................................................TCACAACCTCCTTGAGTGAGCG..........................2223441.00391.50163.002725.50161.00
.......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2321705.50223.00442.00976.0064.50
........................................................................CACAACCTCCTTGAGTGAGC...........................2021681.5016.005.001625.5035.00
........................................................................CACAACCTCCTTGAGTGAGCG..........................2121558.0047.0014.00395.001102.00
.........................................................................ACAACCTCCTTGAGTGAGC...........................192453.003.003.00445.501.50
........................................................................CACAACCTCCTTGAGTGAGCGA.........................222392.0041.0060.00241.5049.50
.......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232356.0021.503.00254.0077.50
.......................................................................TCACAACCTCCTTGAGTGA.............................192246.500.502.50243.000.50
.......................................................................TCACAACCTCCTTGAGTGAGA...........................212214.000.001.00210.502.50
.......................................................................TCACAGCCTCCTTGAGTGAGCG..........................222198.002.000.00195.500.50
.......................................................................CCACAACCTCCTTGAGTGAGC...........................212167.000.000.00167.000.00
.......................................................................TCACAACATCCTTGAGTGAGC...........................212146.000.000.00146.000.00
.......................................................................TCACAGCCTCCTTGAGTGAGC...........................212137.500.500.00136.001.00
.......................................................................TCACAACCTACTTGAGTGAGC...........................212136.500.000.00136.000.50
........................................................................CACAACCTCCTTGAGTGAG............................192135.501.002.00113.0019.50
.......................................................................TCACAACCTCATTGAGTGAGC...........................212130.500.001.00129.500.00
.......................................................................TAACAACCTCCTTGAGTGAGC...........................212128.000.500.00127.500.00
.......................................................................TCACAACCTCCTTGAGTGAAC...........................212128.000.000.00128.000.00
.......................................................................TCACAACCTCCTTGAGTAAGC...........................212126.501.500.50123.501.00
.......................................................................TCAAAACCTCCTTGAGTGAGC...........................212114.500.000.00114.500.00
........................................................................CACAACCTCCTTGAGTGAGCGAT........................23294.507.0014.5057.5015.50
.........................................................................ACAACCTCCTTGAGTGAGCGA.........................21286.5014.5022.0047.502.50
.......................................................................ACACAACCTCCTTGAGTGAGC...........................21284.500.500.0084.000.00
.......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24284.003.009.5027.5044.00
........................................................................CACAGCCTCCTTGAGTGAGCG..........................21281.000.000.0068.5012.50
.......................................................................TCACAACCTCCTTGAATGAGC...........................21280.500.000.0080.500.00
.......................................................................TCACAACCTCCTTGAGCGAGC...........................21273.500.000.5072.001.00
.......................................................................TCACAACCTCCTTAAGTGAGC...........................21268.000.500.5066.500.50
.......................................................................TCACAACCTCCCTGAGTGAGC...........................21266.000.000.5065.500.00
.......................................................................TCACAACCTCCTTGAGTTAGC...........................21261.501.500.0060.000.00
.......................................................................GCACAACCTCCTTGAGTGAGC...........................21260.000.000.0060.000.00
.......................................................................TCACAACCTCCTTGAGTGATC...........................21258.502.001.0055.500.00
.......................................................................TCACGACCTCCTTGAGTGAGC...........................21257.500.001.0056.500.00
.......................................................................TCACAACCTCCTTGGGTGAGC...........................21256.000.000.0055.001.00
.......................................................................TCACAACCTCCTTGAGTGACC...........................21254.000.500.5053.000.00
.......................................................................TCACAACCTCCTTTAGTGAGC...........................21254.000.000.0054.000.00
.......................................................................TCACAACCTCCTCGAGTGAGC...........................21253.500.000.5051.501.50
.......................................................................TCACAACCCCCTTGAGTGAGC...........................21252.500.500.0052.000.00
.......................................................................TCACAACTTCCTTGAGTGAGC...........................21250.000.000.0050.000.00
.........................................................................ACAACCTCCTTGAGTGAGCG..........................20249.505.003.5040.001.00
.......................................................................TCACAACCTCCTTGAGTCAGC...........................21249.000.501.0047.500.00
.......................................................................TCGCAACCTCCTTGAGTGAGC...........................21247.000.000.5046.500.00
.......................................................................TCACAACCTCCTTGAGTGGGC...........................21246.000.000.0045.001.00
.......................................................................TCACAACCTCCTTGATTGAGC...........................21245.500.000.0043.502.00
.......................................................................TCACAGCCTCCTTGAGTGAGCGA.........................23241.001.001.0039.000.00
........................................................................CACAACCTCCTTGAGTGAGCGT.........................22240.002.501.0035.001.50
.......................................................................TCACAACCTCCTTGAGTGAGT...........................21239.000.000.0035.004.00
.......................................................................TCACAGCCTCCTTGAGTGAG............................20237.000.000.0037.000.00
.......................................................................TCACAACCTCCTTGCGTGAGC...........................21237.000.000.0036.500.50
.......................................................................TCACAACCTTCTTGAGTGAGC...........................21236.000.000.0036.000.00
.......................................................................TCATAACCTCCTTGAGTGAGC...........................21236.000.000.0036.000.00
.........................................................................ACAACCTCCTTGAGTGAG............................18234.500.501.0033.000.00
.......................................................................TTACAACCTCCTTGAGTGAGC...........................21233.500.000.0033.500.00
.......................................................................TCACCACCTCCTTGAGTGAGC...........................21233.500.000.0033.500.00
......................................................................CTCACAACCTCCTTGAGTGAGC...........................22233.000.500.5032.000.00
.......................................................................TCACAACCTCCTTGACTGAGC...........................21233.000.000.0033.000.00
.......................................................................TCACACCCTCCTTGAGTGAGC...........................21231.500.000.0031.500.00
.......................................................................TCACAACCTCTTTGAGTGAGC...........................21231.500.000.0031.000.50
.......................................................................TCACxACCTCCTTGAGTGAGC...........................20229.500.000.0029.500.00
.......................................................................TCACAACCTCCTTGAGAGAGC...........................21228.500.000.0028.500.00
.......................................................................TCACAACCTCCTTGAGTGCGC...........................21228.000.500.0027.500.00
.......................................................................TCACAACCTCCTTCAGTGAGC...........................21227.000.001.0024.501.50
.......................................................................TCACAACCTCCTTGAGGGAGC...........................21226.500.000.0024.502.00
..........................GACTCACTCAACCTGGGTGT.........................................................................20225.500.000.0025.500.00
.......................................................................TCCCAACCTCCTTGAGTGAGC...........................21224.500.000.0024.500.00
........................................................................CACAGCCTCCTTGAGTGAGCGA.........................22224.501.000.5023.000.00
.......................................................................TCACAACCTCCATGAGTGAGC...........................21221.000.000.0021.000.00
...........................ACTCACTCAACCTGGGTGT.........................................................................19220.500.000.5020.000.00
.......................................................................TCACAACCTCCTTGAGTGAGCGG.........................23220.000.501.007.5011.00
........................................................................CACGACCTCCTTGAGTGAGCG..........................21220.000.000.001.0019.00
.......................................................................TCACAATCTCCTTGAGTGAGC...........................21220.000.500.5019.000.00
.......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24218.003.005.0010.000.00
.......................................................................TCACAACCTCCTTGAGTGAGAG..........................22217.500.001.0016.000.50
.......................................................................TCACAACCACCTTGAGTGAGC...........................21217.500.000.0017.500.00
.......................................................................CCACAACCTCCTTGAGTGAG............................20217.000.000.0016.500.50
...........................ACTCACTCAACCTGGGTGTGAT......................................................................22217.000.001.0015.001.00
.........................................................................ACAACCTCCTTGAGTGAGCGAT........................22216.002.004.007.003.00
.......................................................................TCACAACCTCCTTGAGTGAGCC..........................22215.501.000.0014.500.00
.......................................................................TCTCAACCTCCTTGAGTGAGC...........................21215.500.000.5015.000.00
............................................................................ACCTCCTTGAGTGAGCGT.........................18215.500.000.000.0015.50
.......................................................................TCACAACCTCCTTGAGTGTGC...........................21215.000.000.0015.000.00
.......................................................................TCACAACCTCCTTGAGTGAGCA..........................22214.502.000.5012.000.00
.......................................................................TCACAACCTACTTGAGTGAG............................20214.000.000.0014.000.00
.......................................................................TCACAACATCCTTGAGTGAGCG..........................22213.500.000.0013.500.00
........................................................................CACAGCCTCCTTGAGTGAGC...........................20213.000.000.0013.000.00
.......................................................................TCACAACATCCTTGAGTGAG............................20213.000.000.0013.000.00
.......................................................................TCACAACCTCCTTGAGTGAGG...........................21213.000.000.009.004.00
.......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23213.001.000.008.503.50
...........................ACTCACTCAACCTGGGTGTG........................................................................20213.000.000.001.5011.50
.......................................................................TCACAACCTCCTAGAGTGAGC...........................21213.000.000.0011.002.00
.......................................................................TCACAACCxCCTTGAGTGAGC...........................20212.500.000.0012.500.00
.......................................................................TCACAACCTCCTTGAGTGAGCT..........................22211.500.500.509.501.00
.......................................................................TCACAACCTACTTGAGTGAGCG..........................22211.500.000.0011.500.00
.......................................................................TCACAACCTCCTTGAGTGAACG..........................22211.000.500.0010.500.00
.......................................................................TCACAACCTCCxTGAGTGAGC...........................20210.500.000.0010.500.00
.......................................................................TCACTACCTCCTTGAGTGAGC...........................21210.500.000.0010.500.00
.......................................................................TAACAACCTCCTTGAGTGAG............................20210.000.000.0010.000.00
.......................................................................TCAAAACCTCCTTGAGTGAG............................20210.000.000.0010.000.00
.......................................................................TCACAACCTCCTTGAGTAAG............................2029.000.000.009.000.00


droVir3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_12875:5789441-5789560 - 87.81
AAGTTAGC--AGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAATAAACCGAACATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTAGTTCGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAGTATCCACTAAGC
SizeHit CountTotal NormV116
Male body
V053
Unknown
V047
Embryo
M027
Male body
M028
Head
........................................................................TCACAACCTCCTTGAGTGAGC...........................2129255.50360.508699.0016.5043.50136.00
........................................................................TCACAACCTCCTTGAGTGAGCG..........................2225176.501291.503840.5018.509.5016.50
........................................................................TCACAACCTCCTTGAGTGAG............................2022587.0053.002504.000.008.5021.50
........................................................................TCACAACCTCCTTGAGTGAGCGA.........................2322207.501072.001065.5047.508.0014.50
.........................................................................CACAACCTCCTTGAGTGAGCG..........................2121344.00171.50819.500.5067.00285.50
.........................................................................CACAACCTCCTTGAGTGAGC...........................2021272.5074.501173.500.503.0021.00
.........................................................................CACAACCTCCTTGAGTGAGCGA.........................222621.00256.00340.005.005.5014.50
........................................................................TCACAACCTCCTTGAGTGA.............................192302.502.00299.000.000.501.00
........................................................................TCACAACCTCCTTGAGTGAGCGT.........................232222.5035.00175.500.502.009.50
..........................................................................ACAACCTCCTTGAGTGAGCGA.........................212139.5042.5094.501.001.500.00
.........................................................................CACAACCTCCTTGAGTGAG............................192136.000.50121.500.000.5013.50
..........................................................................ACAACCTCCTTGAGTGAGC...........................192135.006.00128.000.000.001.00
..........................................................................ACAACCTCCTTGAGTGAGCG..........................202100.5021.5078.000.500.000.50
.........................................................................CACAACCTCCTTGAGTGAGCGAT........................23299.5029.0063.501.003.502.50
........................................................................TCACAACCTCCTTGAGTGACC...........................21270.500.0070.500.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGAT........................24269.5020.5031.500.506.5010.50
........................................................................TCACAACCTCCTTGAGCGAGC...........................21268.500.5067.500.000.000.50
........................................................................TCACAAACTCCTTGAGTGAGC...........................21261.500.0061.500.000.000.00
.......................................................................ATCACAACCTCCTTGAGTGAGC...........................22260.004.5053.002.500.000.00
...............................TCACTCAACCTGGGTGTGATGT...................................................................22257.001.0050.505.500.000.00
.......................................................................ATCACAACCTCCTTGAGTGAG............................21253.001.5050.500.000.001.00
.........................................................................CACAACCTCCTTGAGTGAGCGT.........................22247.508.0038.500.000.500.50
........................................................................TCACAACCTCCTTGAGTGAGA...........................21238.500.0037.500.500.000.50
........................................................................TCACAACCTCCTTGAGTTAGC...........................21237.000.0037.000.000.000.00
........................................................................TCACAACCTCCTTGAGCGAGCG..........................22236.001.0035.000.000.000.00
........................................................................TCACAACCTCCTTGAGAGAGC...........................21236.000.5035.500.000.000.00
........................................................................TCACAACCTCCTTGCGTGAGCG..........................22234.000.5033.000.500.000.00
........................................................................TCACAACCTCCTTGACTGAGC...........................21231.500.5031.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGACCG..........................22230.001.0029.000.000.000.00
........................................................................TCACAACCTCCTTGTGTGAGCG..........................22229.500.0029.500.000.000.00
........................................................................CCACAACCTCCTTGAGTGAGC...........................21229.000.0028.500.000.000.50
........................................................................TCACAACCTCCTTGAGTGAGT...........................21228.001.0024.500.000.502.00
........................................................................TCACAACCTCCGTGAGTGAGC...........................21228.000.0028.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCT..........................22227.5012.0015.000.000.000.50
........................................................................TCACAACCTCCTTGAGGGAGC...........................21226.000.5024.500.000.500.50
..........................................................................ACAACCTCCTTGAGTGAG............................18226.000.5025.500.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGAA........................24225.5010.5015.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGATC...........................21224.000.0024.000.000.000.00
........................................................................TCACAACCTCCTTGAGAGAGCG..........................22223.002.0021.000.000.000.00
........................................................................TCACAACCGCCTTGAGTGAGC...........................21223.000.0023.000.000.000.00
........................................................................TCACAACCTCCTTCAGTGAGC...........................21221.500.0021.500.000.000.00
........................................................................TAACAACCTCCTTGAGTGAGC...........................21220.500.0020.500.000.000.00
........................................................................TCACAACCTCCTTGAGCGAG............................20220.500.0020.500.000.000.00
.........................................................................CACAACATCCTTGAGTGAGC...........................20220.500.0020.500.000.000.00
.......................................................................ATCACAACCTCCTTGAGTGA.............................20220.001.0018.000.000.001.00
........................................................................TCACAAACTCCTTGAGTGAGCG..........................22220.000.0020.000.000.000.00
........................................................................TCACAACCTCCTTGCGTGAG............................20219.500.0019.500.000.000.00
........................................................................TCACAACCTCCTTGCGTGAGC...........................21219.000.5018.500.000.000.00
........................................................................TCACAACCTCCTTGAGTCAGC...........................21218.500.0018.500.000.000.00
............................GACTCACTCAACCTGGGTGT........................................................................20218.001.5016.500.000.000.00
........................................................................TCACAACCCCCTTGAGTGAGC...........................21218.000.5017.000.500.000.00
........................................................................TCACAAACTCCTTGAGTGAG............................20217.500.0017.500.000.000.00
........................................................................TCACAACCTCCTTGTGTGAGC...........................21217.500.5017.000.000.000.00
...............................TCACTCAACCTGGGTGTGATG....................................................................21217.500.5016.500.500.000.00
........................................................................TCACAACCTCCTTGAGTGCGC...........................21217.500.5016.000.000.001.00
........................................................................TCACAACCTCCTTAAGTGAGC...........................21217.500.0017.500.000.000.00
........................................................................TCACAACCTCATTGAGTGAGC...........................21216.000.0016.000.000.000.00
.............................ACTCACTCAACCTGGGTGT........................................................................19216.000.0016.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCA..........................22215.503.5012.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGGGCG..........................22215.001.5013.500.000.000.00
........................................................................TCGCAACCTCCTTGAGTGAGC...........................21214.500.0014.500.000.000.00
........................................................................TCACAACCTCCTTGTGTGAG............................20213.500.0013.500.000.000.00
........................................................................TCACAACCTCCTTGAGTGGGC...........................21213.500.0013.500.000.000.00
.............................ACTCACTCAACCTGGGTGTGAT.....................................................................22213.000.0013.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCC..........................22213.001.0012.000.000.000.00
........................................................................TCACAACCTCCTGGAGTGAGC...........................21212.500.0012.500.000.000.00
.............................ACTCACTCAACCTGGGTGTGT......................................................................21212.500.0012.500.000.000.00
........................................................................TCACAACCTCCCTGAGTGAGC...........................21212.502.0010.500.000.000.00
.........................................................................CACAACATCCTTGAGTGAGCG..........................21212.500.0012.500.000.000.00
........................................................................TCACAACCTCCTTGAGTGAGCGC.........................23212.501.0011.000.500.000.00
.............................ACTCACTCAACCTGGGTGTG.......................................................................20212.000.005.500.000.006.50
........................................................................TCACAACCTCCTTGAGTGAC............................20212.000.0011.500.000.000.50
........................................................................TCACAACCTCCGTGAGTGAGCG..........................22212.000.0012.000.000.000.00
.........................................................................CACAACCTCCTTGAGCGAGC...........................20211.500.5011.000.000.000.00
.............................ACTCACTCAACCTGGGTGTGA......................................................................21211.500.009.500.000.002.00
........................................................................TCACAACCTCCTTGACTGAG............................20211.500.0011.500.000.000.00
........................................................................TCACAACCTCCTTGACTGAGCG..........................22211.500.0011.500.000.000.00
.........................................................................CACAACCTCCTTGCGTGAGCG..........................21211.500.0011.500.000.000.00
........................................................................TCACAACCTCCTTGAGTAAGC...........................21211.001.509.500.000.000.00
........................................................................TCACAGCCTCCTTGAGTGAGC...........................21211.000.0011.000.000.000.00
........................................................................TCACAAACTCCTTGAGTGACC...........................21211.000.0011.000.000.000.00
........................................................................TCACAACCTCCTCGAGTGAGC...........................21211.000.0011.000.000.000.00
........................................................................TCACAACCTCCTTGGGTGAGCG..........................22210.502.507.500.500.000.00
..........................................................................ACAACCTCCTTGAGTGAGCGAT........................22210.504.005.000.001.000.50
........................................................................TCACAACCTCCGTGAGTGAG............................20210.500.0010.500.000.000.00
........................................................................TCACAACCTCCTTGAGCGAGCGA.........................23210.501.509.000.000.000.00
........................................................................TCACAACCTACTTGAGTGAGC...........................21210.000.009.500.000.000.50
........................................................................TCACAACCCCCTTGAGTGAGCG..........................22210.001.009.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGCGCG..........................22210.000.0010.000.000.000.00
........................................................................TCACAACCTCCTTGAGGGAGCG..........................22210.002.507.000.000.500.00
........................................................................TCACAACCTCCTTGAGTTACC...........................2129.500.009.500.000.000.00
........................................................................TCACAACCTCCTTGCGTGAGCGA.........................2329.501.007.501.000.000.00
........................................................................TCACAACCTCCTTGAGTGCG............................2029.000.009.000.000.000.00
........................................................................TCACAACATCCTTGAGTGAGC...........................2129.000.009.000.000.000.00
........................................................................TCACAACCTCCTTGAGAGAG............................2029.000.009.000.000.000.00
........................................................................TCACAACCTCCTTGAGTGGG............................2029.000.009.000.000.000.00
.........................................................................CACAACCTCCTTGAGGGAGCG..........................2129.000.005.000.001.502.50
.........................................................................CACAACCTCCTTGAGCGAGCG..........................2129.000.508.000.000.000.50
.........................................................................CACAACCTCCTTGAGGGAGC...........................2029.000.009.000.000.000.00
.........................................................................CACAACATCCTTGAGGGAGC...........................2029.000.009.000.000.000.00
........................................................................TCACAACCTCCGTGAGAGAGC...........................2129.000.009.000.000.000.00


droMoj3 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
3 scaffold_6496:24271667-24271782 + 90.68
AAGTTAGCAGCATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAACTA--AGAATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATTCGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAAGC
SizeHit CountTotal NormV110
Male body
V056
Unknown
V049
Head
V041
Embryo
......................................................................TCACAACCTCCTTGAGTGAGC...........................21213631.50271.508112.505217.5030.00
......................................................................TCACAACCTCCTTGAGTGAGCG..........................2225570.50348.503240.001954.5027.50
......................................................................TCACAACCTCCTTGAGTGAG............................2024565.5071.002826.001668.500.00
.......................................................................CACAACCTCCTTGAGTGAGC...........................2022654.5074.501600.50978.001.50
......................................................................TCACAACCTCCTTGAGTGAGCGA.........................2322084.00424.00998.50599.5062.00
.......................................................................CACAACCTCCTTGAGTGAGCG..........................2121451.50107.00857.00486.001.50
......................................................................TCACAACCTCCTTGAGTGAGCGT.........................232839.5052.50493.50293.500.00
.......................................................................CACAACCTCCTTGAGTGAGCGA.........................222734.50136.50401.50186.0010.50
.......................................................................CACAACCTCCTTGAGTGAGCGT.........................222535.0022.00320.00193.000.00
......................................................................TCACAACCTCCTTGAGTGA.............................192491.001.00298.50191.500.00
.......................................................................CACAACCTCCTTGAGTGAG............................192286.504.00183.0099.500.00
........................................................................ACAACCTCCTTGAGTGAGC...........................192163.001.0095.0067.000.00
......................................................................TCACAACCTCCTTGAGTGAGT...........................212159.000.50100.0058.500.00
......................................................................TCACAACCTCCTTGCGTGAGCG..........................222148.500.0034.50113.001.00
......................................................................TCACAACCTCCTTGCGTGAGC...........................212134.500.0020.50114.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGTT........................232133.508.5085.5039.500.00
......................................................................TCACAACCTCCTTGCGTGAG............................202111.500.0021.0090.500.00
.......................................................................CACAACCTCCTTGAGTGAGCGAT........................232102.0015.0056.0031.000.00
......................................................................TCACAACCTCCTTGAGCGAGC...........................21298.500.0059.5039.000.00
........................................................................ACAACCTCCTTGAGTGAGCGA.........................21295.5013.0050.0031.001.50
........................................................................ACAACCTCCTTGAGTGAGCG..........................20288.004.5044.0038.501.00
......................................................................TCACAACCTCCTTGAGTGAGCT..........................22288.002.5045.5040.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGAT........................24267.005.0042.5019.500.00
......................................................................TCACAACCTCCTTGAGTGAGCGTT........................24262.500.5040.0022.000.00
......................................................................TCACAACCTCCTTGAGTGCGC...........................21260.500.0012.5048.000.00
......................................................................TCACAACCTCCTTGAGTGATC...........................21256.001.0025.0030.000.00
......................................................................TCACAACCTCCTTGAGTGAGA...........................21256.001.5035.0019.500.00
...........................ACTCACTCAACCTGGGTGT........................................................................19253.500.0026.0027.500.00
......................................................................TCGCAACCTCCTTGAGTGAGC...........................21242.501.0019.5022.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGAA........................24241.507.5023.0010.001.00
......................................................................TCACAACCTCCTTGACTGAGC...........................21241.000.0029.5011.500.00
......................................................................TCACAACCTCCTTGAGTTAGC...........................21240.500.5012.5027.500.00
..........................GACTCACTCAACCTGGGTGT........................................................................20240.501.0020.0019.500.00
......................................................................TCACAACCTCCTTGAGAGAGC...........................21240.500.0033.507.000.00
......................................................................TCACAACCTCCTTGAGCGAGCG..........................22238.000.0024.5013.500.00
......................................................................TCACAACCTCCTTGAGTGCG............................20237.500.007.0030.500.00
......................................................................TCACAACCTCCTTGAGTGCGCG..........................22237.000.008.0029.000.00
........................................................................ACAACCTCCTTGAGTGAG............................18235.000.0022.5012.000.50
......................................................................TAACAACCTCCTTGAGTGAGC...........................21234.000.5025.508.000.00
......................................................................TCACAACCTCCTTGAGCGAG............................20233.500.0019.5014.000.00
......................................................................TCACAACCTCCTTGAGTCAGC...........................21232.000.0020.5011.500.00
......................................................................TCACAACCTCCTTGCGTGAGCGA.........................23232.000.007.5024.500.00
......................................................................TCACAGCCTCCTTGAGTGAGC...........................21230.001.0018.0011.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGC.........................23229.005.5014.009.000.50
......................................................................TCACAACCTCCTTGAGTGGGC...........................21228.500.0016.0012.500.00
.......................................................................CACAACCTCCTTGAGTGAGCGATT.......................24228.501.5016.0011.000.00
......................................................................TCGCAACCTCCTTGAGTGAGCG..........................22226.500.0017.009.500.00
......................................................................TCACAAACTCCTTGAGTGAGC...........................21226.000.0018.008.000.00
......................................................................TCACAACCTCCCTGAGTGAGC...........................21225.500.0010.0015.500.00
......................................................................TCACAACCTCCGTGAGTGAGC...........................21225.000.0019.505.500.00
...........................ACTCACTCAACCTGGGTGTGT......................................................................21225.000.0013.5011.500.00
......................................................................TCACAACCTCCTTGGGTGAGC...........................21225.000.0015.509.500.00
...........................ACTCACTCAACCTGGGTGTGA......................................................................21224.000.509.0014.500.00
......................................................................TCACAACCTCCTTGCGTGAGCGT.........................23223.500.006.0017.500.00
......................................................................TCACAGCCTCCTTGAGTGAGCGA.........................23223.500.5015.507.000.50
......................................................................CCACAACCTCCTTGAGTGAGC...........................21223.000.0015.008.000.00
......................................................................TCACAACCTCCTTCAGTGAGC...........................21223.000.0014.508.500.00
........................................................................ACAACCTCCTTGAGTGAGCGT.........................21223.000.5013.009.500.00
......................................................................TCACAACCTCCTTGAGTGAGCA..........................22223.000.009.5013.500.00
......................................................................TCACAACCTCCTTGAGTGATCG..........................22222.501.5013.008.000.00
......................................................................TCACAACCTCCTTAAGTGAGC...........................21222.500.008.5014.000.00
.......................................................................CACAACCTCCTTGCGTGAGCG..........................21222.000.006.5015.500.00
.......................................................................CACAACCTCCTTGAGCGAGC...........................20221.500.0014.507.000.00
......................................................................TCACAGCCTCCTTGAGTGAGCG..........................22221.000.5011.009.000.50
......................................................................TCACGACCTCCTTGAGTGAGC...........................21220.500.0012.008.500.00
......................................................................TCACAACCTCCTTGAGTAAGC...........................21220.500.507.0013.000.00
......................................................................TCACAATCTCCTTGAGTGAGC...........................21220.000.0015.005.000.00
......................................................................TCACAACCTCCTTGCGTGCGC...........................21220.000.002.0018.000.00
.......................................................................CACAGCCTCCTTGAGTGAGCGA.........................22219.501.0013.005.500.00
......................................................................TCACAACCTCCTCGAGTGAGC...........................21219.000.0012.506.500.00
......................................................................TCACAACCTCCTTGAGTGGGCG..........................22218.501.008.009.500.00
......................................................................TCACAACCTCCTTTAGTGAGC...........................21218.500.009.009.500.00
......................................................................TCACAACCTCCTTGAGTGACC...........................21218.500.0013.005.500.00
......................................................................TCACCACCTCCTTGAGTGAGC...........................21218.500.005.5013.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGATT.......................25218.501.009.508.000.00
......................................................................TCACAACCTCCTTGAGGGAGC...........................21218.500.0011.507.000.00
......................................................................TCACAACCGCCTTGAGTGAGC...........................21218.000.0013.005.000.00
.......................................................................CACAACCTCCTTGCGTGAGC...........................20217.500.002.5015.000.00
......................................................................TCACAACCTCCTTGATTGAGC...........................21217.500.5011.006.000.00
...........................ACTCACTCAACCTGGGTGTG.......................................................................20217.500.007.5010.000.00
......................................................................TCACAACCTCCTTGAGCGAGCGA.........................23216.501.0011.503.001.00
......................................................................TCACAACCTCCTTGAGTTAG............................20216.500.004.0012.500.00
......................................................................TCGCAACCTCCTTGAGTGAGCGA.........................23216.001.509.505.000.00
......................................................................TCACAACCTCCTTGACTGAG............................20216.000.006.509.500.00
......................................................................TCACAACCTCCTTGAGTGGG............................20215.500.009.506.000.00
.......................................................................CACAGCCTCCTTGAGTGAGCG..........................21215.001.508.505.000.00
.......................................................................CACAACCTCCTTGAGTGCGCG..........................21215.000.004.0011.000.00
......................................................................TCACAACCCCCTTGAGTGAGC...........................21215.000.009.006.000.00
......................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................25214.504.007.003.500.00
......................................................................TCACAACCTCCTTGAGTGAT............................20214.500.007.507.000.00
......................................................................TCACAACCTCCTTGGGTGAGCG..........................22214.500.007.507.000.00
.......................................................................CACAACCTCCTTGAGTGAGCGAA........................23214.503.007.504.000.00
...........................ACTCACTCAACCTGGGTGTGAT.....................................................................22214.500.006.007.501.00
......................................................................TCACACCCTCCTTGAGTGAGC...........................21214.000.005.508.500.00
......................................................................TCACAACCTCCTTGAATGAGC...........................21214.000.507.506.000.00
......................................................................TCACAACCTCCTTGAGTGAGTG..........................22214.000.008.006.000.00
......................................................................TCACAACCTCCTTGAGAGAG............................20213.500.0010.003.500.00
.......................................................................CACAACCTCCTTGAGCGAGCG..........................21213.500.509.503.500.00
.......................................................................CACAACCTCCTTGAGTCAGC...........................20213.000.008.005.000.00
......................................................................TCGCAACCTCCTTGAGTGAG............................20213.000.007.505.500.00
......................................................................TCACAACCTCATTGAGTGAGC...........................21213.000.009.004.000.00


droGri2 - 1 hit found

Lastz ID Coordinate Normalized Identity % Sequence RNAfold UNAfold
2 scaffold_15112:722942-723066 - 80.18
AAGTTAGCAG-------CATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATATGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGACAGAGTATCCACGAAAC
AAAATAAAAGAACTAAACATTTTGTCTTGCTTTGACTCACTCAACCTGGGTGTGATGTTATTTCGATTTGGTATCCATCACAACCTCCTTGAGTGAGCGATAGCAGGATAGAATATCCACAAGAA
SizeHit CountTotal NormV109
Male body
.............................................................................TCACAACCTCCTTGAGTGAGCGA.........................232346.50346.50
.............................................................................TCACAACCTCCTTGAGTGAGCG..........................222334.00334.00
.............................................................................TCACAACCTCCTTGAGTGAGC...........................212107.50107.50
..............................................................................CACAACCTCCTTGAGTGAGCGA.........................222100.00100.00
..............................................................................CACAACCTCCTTGAGTGAGCG..........................21237.0037.00
.............................................................................TCACAACCTCCTTGAGTGAGCGT.........................23218.0018.00
...............................................................................ACAACCTCCTTGAGTGAGCGA.........................21214.5014.50
..............................................................................CACAACCTCCTTGAGTGAGC...........................20212.5012.50
.............................................................................TCACAACCTCCTTGAGTGAG............................2028.008.00
..............................................................................CACAACCTCCTTGAGTGAGCGAT........................2327.507.50
.............................................................................TCACAACCTCCTTGAGTCAGCG..........................2225.505.50
.............................................................................TCACAACCTCCTTGAGTGAGCGAT........................2425.005.00
.............................................................................TCACAACCTCCTTGAGTGAGCGC.........................2325.005.00
.............................................................................TCACAACCTCCTTGAGTAAGCG..........................2224.004.00
.............................................................................TCACAACCTCCTTGAGTGAGCGG.........................2323.003.00
.............................................................................TCACAACCTCCTTGAGTGAGCGAA........................2423.003.00
...............................................................................ACAACCTCCTTGAGTGAGCG..........................2023.003.00
.............................................................................TCACAACCTCCTTGAGTCAGCGA.........................2323.003.00
.............................................................................TCACAACCTCCTTGAGTTAGCG..........................2222.502.50
..............................................................................CACAACCTCCTTGAGTGAGCGT.........................2222.502.50
.............................................................................TCACAACCTCCTTGAGTGAGCGAAA.......................2522.002.00
.............................................................................TCACAACCTCCTTGAGTCAGC...........................2122.002.00
..............................................................................CACAACCTCCTTGAGTGAGCGAA........................2322.002.00
.............................................................................TCACAACCTCCTTGAGTGAGCGATT.......................2521.501.50
.............................................................................TCACAACCCCCTTGAGTGAGCGA.........................2321.501.50
.............................................................................TCTCAACCTCCTTGAGTGAGCG..........................2221.501.50
.............................................................................TCACAACCTCCTTGAGTTAGCGA.........................2321.501.50
.............................................................................TCACAACCTCCTTGAGTGCGCGA.........................2321.501.50
.............................................................................TCACAACCTCCTTGAGTTAGC...........................2121.501.50
.............................................................................TCCCAACCTCCTTGAGTGAGCGA.........................2321.501.50


Generated: 04/20/2012 at 05:21:31 EDT