dme-mir-133- Best orthologs

dme-mir-133	chr2L:20616617-20616714 +	Known_mirbase
[View on miRBase]	[View on UCSC Genome Browser {Cornell Mirror}]	intergenic

Legend:

   mature strand at position 20616673-20616694
   star strand at position 20616635-20616657
   mutations
   read mismatches

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Species	Coordinate	Source	Confidence	Alignment
dm3	chr2L:20616602-20616729 +		1	CATTC--GA-GAA----------------------------------TTT--------CCACCTGCAAC-ACTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAG-CCTA----------------GTGAAC
droSim1	chr2L:20179920-20180047 +	LASTZ	1	CATTC--AA-AAA----------------------------------TCT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCGA----------------GGGAAC
droSec1	super_18:496867-496993 +	LASTZ	1	CATTC--GA-G-A----------------------------------TTT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCTA----------------GCGAAC
droYak2	chr2R:6964793-6964921 +	LASTZ	1	TATTC--CA-GAA----------------------------------TTT--------CCTCCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTT-CCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAGT-ACGA----------------GTAAAC
droEre2	scaffold_4845:3836606-3836724 -	LASTZ	1	ATTT-------------------------------------------------------CCTCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--CCTAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGCCAACTAAAT-TCGA----------------GTGAAC
droEug1	scf7180000409767:678694-678826 -	LASTZ	4	TTTTCCAGA-AAA----------------------------------TGA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTACTTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGAATT-TCGA----------------GTGAAA
droBia1	scf7180000302422:7475085-7475212 -	LASTZ	4	TGTTT--AA--AA----------------------------------TCA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACAGCGGAGT-ACGA----------------GTGAAC
droTak1	scf7180000415104:189967-190095 -	LASTZ	4	TATTT--AA-AAA----------------------------------TGA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACTCGAC-ACTA----------------GTGAAC
droEle1	scf7180000491186:607671-607801 +	LASTZ	4	TATTA--AACAAA----------------------------------TTA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC
droRho1	scf7180000777920:26469-26599 +	LASTZ	4	TATTA--AACAAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC
droFic1	scf7180000453842:123951-124080 +	LASTZ	4	TATTC--AA-AAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAC-CCGA----------------GTGAAC
droKik1	scf7180000302408:807302-807430 +	LASTZ	4	TATTT--AA-AAT----------------------------------TTA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-TGTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACGAAAT-ACGA----------------GTGAAC
droAna3	scaffold_12916:7117508-7117634 +	LASTZ	1	TT--C--GT-GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-CTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA
droBip1	scf7180000396566:293454-293581 +	LASTZ	4	TTTGT-----GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-GTTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA
dp4	chr4_group3:7699977-7700121 -	LASTZ	1	GACGC--GT-GTG----------------------------------TGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGTGCCAACAAATAATAAAG
droPer1	super_1:9145698-9145865 -	LASTZ	1	TATTT--GT-ATGTG--TATTT---------GTATGTGACGCGTGTGTGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGCGCCAACAAATAATAAAG
droWil1	scaffold_180708:2027542-2027651 +	LASTZ	1	T---------------------------------------------------------------ACAAC-ACTGAATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACAAAAA-GCA-----------------ATGGAA
droVir3	scaffold_12963:13475783-13475914 -	LASTZ	1	CAAAC--GA-AGATA--TATATTGCCAATCGAA--------------TC---------ACATTCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTAT-TTCT-GAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGAAGCCAACAA------------------------------
droMoj3	scaffold_6500:24707638-24707772 +	LASTZ	1	CATGA--AATAAA-T--TGTGT---------------------TGTGTACTCAAACAAACATCCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTGT-TTT--TCGAGAATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAGT----------------------------
droGri2	scaffold_15126:6389834-6389991 +	LASTZ	1	CAAAC--AA-AACTATATACATGATTAATTTGAA-------------T----------TTATTTACAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTAT-TCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAAGTGAACTTAAG-----AAC-AATAGTGAAA

Legend

0- The ortholog is absent. A better synthenic sequence candidate could not be found.
1- Reads w/ good pileup on mature and star strand & folds into hairpin structure.
2- Reads w/ good pileup on mature and star strand BUT does not fold into hairpin structure.
3- Sporadic reads & folds into a hairpin structure.
4- No reads but folds into a hairpin structure.
5- Ortholog is confident but miRNA appears absent (no reads and does not fold into a hairpin)

Re-alignment after removal of non-confident orthologs

Species	Alignment
dm3	CATTC--GA-GAA----------------------------------TTT--------CCACCTGCAAC-ACTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAG-CCTA----------------GTGAAC
droSim1	CATTC--AA-AAA----------------------------------TCT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCGA----------------GGGAAC
droSec1	CATTC--GA-G-A----------------------------------TTT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCTA----------------GCGAAC
droYak2	TATTC--CA-GAA----------------------------------TTT--------CCTCCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTT-CCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAGT-ACGA----------------GTAAAC
droEre2	ATTT-------------------------------------------------------CCTCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--CCTAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGCCAACTAAAT-TCGA----------------GTGAAC
droEug1	TTTTCCAGA-AAA----------------------------------TGA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTACTTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGAATT-TCGA----------------GTGAAA
droBia1	TGTTT--AA--AA----------------------------------TCA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACAGCGGAGT-ACGA----------------GTGAAC
droTak1	TATTT--AA-AAA----------------------------------TGA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACTCGAC-ACTA----------------GTGAAC
droEle1	TATTA--AACAAA----------------------------------TTA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC
droRho1	TATTA--AACAAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC
droFic1	TATTC--AA-AAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAC-CCGA----------------GTGAAC
droKik1	TATTT--AA-AAT----------------------------------TTA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-TGTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACGAAAT-ACGA----------------GTGAAC
droAna3	TT--C--GT-GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-CTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA
droBip1	TTTGT-----GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-GTTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA
dp4	GACGC--GT-GTG----------------------------------TGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGTGCCAACAAATAATAAAG
droPer1	TATTT--GT-ATGTG--TATTT---------GTATGTGACGCGTGTGTGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGCGCCAACAAATAATAAAG
droWil1	T---------------------------------------------------------------ACAAC-ACTGAATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACAAAAA-GCA-----------------ATGGAA
droVir3	CAAAC--GA-AGATA--TATATTGCCAATCGAA--------------TC---------ACATTCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTAT-TTCT-GAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGAAGCCAACAA------------------------------
droMoj3	CATGA--AATAAA-T--TGTGT---------------------TGTGTACTCAAACAAACATCCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTGT-TTT--TCGAGAATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAGT----------------------------
droGri2	CAAAC--AA-AACTATATACATGATTAATTTGAA-------------T----------TTATTTACAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTAT-TCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAAGTGAACTTAAG-----AAC-AATAGTGAAA

20-way Secondary Structure

	dm3	droSim1	droSec1	droYak2	droEre2	droEug1	droBia1	droTak1	droEle1	droRho1	droFic1	droKik1	droAna3	droBip1	dp4	droPer1	droWil1	droVir3	droMoj3	droGri2
RNAfold Image
UNAFold Image

Small RNA-seq read pileup

Species

Alignment

droSim1

CATTC--AA-AAA----------------------------------TCT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCGA----------------GGGAAC	Size	Hit Count	Total Norm	V044 Embryo	M023 Head	M024 Male body	M025 Embryo
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	31156.00	94.00	28455.00	2379.00	228.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	25738.00	1993.00	21624.00	904.00	1217.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	4083.00	2.00	3799.00	104.00	178.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	3695.00	6.00	3250.00	168.00	271.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	652.00	221.00	258.00	12.00	161.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	561.00	0.00	489.00	10.00	62.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	418.00	174.00	106.00	2.00	136.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGG.....................................................	21	1	285.00	1.00	246.00	34.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	271.00	9.00	230.00	32.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	211.00	1.00	182.00	2.00	26.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTG.....................................................	20	1	206.00	0.00	196.00	4.00	6.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	179.00	1.00	159.00	2.00	17.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	157.00	0.00	145.00	1.00	11.00
........................................................................................................................TTGGTCCCCTTCAACCAGC.......................................................	19	1	141.00	0.00	125.00	10.00	6.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	106.00	0.00	98.00	1.00	7.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTG.....................................................	21	1	101.00	0.00	95.00	1.00	5.00
...........................................................................................................................GTCCCCTTCAACCAGCTGT....................................................	19	1	98.00	0.00	90.00	2.00	6.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	96.00	9.00	85.00	2.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGC....................................................	21	1	93.00	0.00	86.00	0.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	80.00	1.00	75.00	3.00	1.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGG....................................................	21	1	76.00	0.00	64.00	1.00	11.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTG.....................................................	21	1	64.00	0.00	58.00	1.00	5.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	63.00	13.00	46.00	3.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	60.00	3.00	53.00	2.00	2.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	58.00	0.00	52.00	0.00	6.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	56.00	15.00	25.00	5.00	11.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	55.00	0.00	51.00	4.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	47.00	4.00	40.00	1.00	2.00
...........................................................................................................................GTCCCCTTCAACCAGCTG.....................................................	18	1	44.00	0.00	42.00	1.00	1.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTG.....................................................	21	1	41.00	0.00	38.00	3.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTG.....................................................	21	1	41.00	0.00	40.00	1.00	0.00
...........................................................................................................................TTCCCCTTCAACCAGCTGT....................................................	19	1	41.00	0.00	39.00	0.00	2.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGC....................................................	22	1	39.00	0.00	34.00	0.00	5.00
...............................................................................AGCTGGTTGACATCGGGTCAGG.............................................................................................	22	1	36.00	1.00	14.00	1.00	20.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	36.00	34.00	2.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCG.....................................................	21	1	32.00	0.00	29.00	3.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGG....................................................	22	1	32.00	0.00	26.00	0.00	6.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	31.00	1.00	23.00	2.00	5.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGG....................................................	22	1	29.00	0.00	27.00	2.00	0.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGC....................................................	22	1	29.00	0.00	25.00	0.00	4.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGG....................................................	22	1	29.00	0.00	21.00	1.00	7.00
............................................................................................................................TCCCCTTCAACCAGCTGT....................................................	18	1	29.00	0.00	26.00	1.00	2.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGC....................................................	22	1	28.00	0.00	23.00	1.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTG.....................................................	21	1	27.00	0.00	25.00	2.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCC......................................................	20	1	27.00	0.00	23.00	4.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGG....................................................	22	1	25.00	0.00	22.00	0.00	3.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	25.00	0.00	23.00	1.00	1.00
...........................................................................................................................TTCCCCTTCAACCAGCTG.....................................................	18	1	23.00	0.00	22.00	1.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	21.00	14.00	7.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	21.00	3.00	15.00	3.00	0.00
..........................................................................................................................TGTCCCCTTCAACCAGCTGT....................................................	20	1	20.00	0.00	16.00	1.00	3.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	19.00	4.00	11.00	0.00	4.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	18.00	2.00	15.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTG.....................................................	21	1	18.00	0.00	16.00	2.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGAC............................................................................................	23	1	18.00	0.00	16.00	0.00	2.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTG.....................................................	21	1	18.00	0.00	18.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	17.00	3.00	13.00	1.00	0.00
...........................................................................................................................GTCCCCTTCAACCAGCTGG....................................................	19	1	17.00	0.00	15.00	0.00	2.00
...............................................................................AGCTGGTTGACATCGGGTC................................................................................................	19	1	17.00	0.00	16.00	1.00	0.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTG.....................................................	21	1	17.00	0.00	17.00	0.00	0.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	17.00	0.00	17.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	16.00	15.00	1.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTG.....................................................	21	1	16.00	0.00	15.00	1.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	15.00	4.00	11.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGC....................................................	22	1	15.00	0.00	14.00	0.00	1.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTG.....................................................	20	1	14.00	0.00	13.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	14.00	2.00	10.00	0.00	2.00
.........................................................................................................................TCGTCCCCTTCAACCAGCTGT....................................................	21	1	14.00	0.00	13.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTA.....................................................	21	1	13.00	0.00	12.00	1.00	0.00
........................................................................................................................TTGATCCCCTTCAACCAGCTG.....................................................	21	1	12.00	0.00	10.00	0.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	12.00	4.00	8.00	0.00	0.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTG.....................................................	21	1	12.00	0.00	12.00	0.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTG.....................................................	21	1	12.00	0.00	11.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	12.00	3.00	8.00	0.00	1.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	12.00	1.00	9.00	0.00	2.00
...........................................................................................................................GTCCCCTTCAACCAGCTGC....................................................	19	1	12.00	0.00	12.00	0.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTG.....................................................	21	1	12.00	0.00	12.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAC....................................................	22	1	12.00	0.00	12.00	0.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGC....................................................	22	1	11.00	0.00	10.00	0.00	1.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	11.00	1.00	7.00	3.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGG....................................................	22	1	11.00	0.00	11.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCG......................................................	20	1	11.00	0.00	9.00	2.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	10.00	2.00	7.00	0.00	1.00
...........................................................................................................................TTCCCCTTCAACCAGCTGC....................................................	19	1	10.00	0.00	10.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAAGCAGCTG.....................................................	21	1	10.00	0.00	10.00	0.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	10.00	10.00	0.00	0.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCA...............................................................................................	20	1	10.00	0.00	8.00	0.00	2.00
........................................................................................................................TTGGTCCCCTTCAAxCAGCTGT....................................................	21	1	10.00	0.00	9.00	1.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTG.....................................................	21	1	10.00	0.00	9.00	1.00	0.00
........................................................................................................................TTGGTCCCCxTCAACCAGCTG.....................................................	20	1	10.00	0.00	9.00	1.00	0.00
........................................................................................................................TTGGTACCCTTCAACCAGCTG.....................................................	21	1	10.00	0.00	10.00	0.00	0.00
.........................................................................................................................TCGTCCCCTTCAACCAGCTG.....................................................	20	1	10.00	0.00	10.00	0.00	0.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTG.....................................................	21	1	9.00	0.00	9.00	0.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTG.....................................................	21	1	9.00	0.00	9.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	9.00	0.00	9.00	0.00	0.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTG.....................................................	21	1	9.00	0.00	8.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	9.00	3.00	5.00	0.00	1.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTG.....................................................	21	1	9.00	0.00	8.00	1.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTG.....................................................	21	1	9.00	0.00	8.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	8.00	5.00	3.00	0.00	0.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	8.00	0.00	7.00	0.00	1.00

droSec1

CATTC--GA-G-A----------------------------------TTT--------GCACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--TTAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACATCGAAAG-CCTA----------------GCGAAC	Size	Hit Count	Total Norm	V113 Male body	V114 Embryo	V115 Head
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	104944.00	16470.00	12266.00	76208.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	6602.00	285.00	167.00	6150.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	5482.00	201.00	24.00	5257.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	1434.00	126.00	50.00	1258.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	1344.00	109.00	635.00	600.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	1019.00	126.00	63.00	830.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	562.00	82.00	4.00	476.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	456.00	14.00	329.00	113.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	289.00	23.00	12.00	254.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	240.00	139.00	2.00	99.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	206.00	3.00	4.00	199.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	202.00	37.00	32.00	133.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	180.00	3.00	3.00	174.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	166.00	7.00	7.00	152.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	150.00	16.00	15.00	119.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	147.00	27.00	27.00	93.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	147.00	9.00	0.00	138.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	136.00	10.00	25.00	101.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	127.00	24.00	11.00	92.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	122.00	79.00	24.00	19.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	122.00	15.00	9.00	98.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	115.00	7.00	1.00	107.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	108.00	14.00	21.00	73.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	107.00	1.00	60.00	46.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	105.00	18.00	17.00	70.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	104.00	18.00	8.00	78.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	104.00	16.00	15.00	73.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	100.00	9.00	43.00	48.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	99.00	7.00	11.00	81.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	96.00	8.00	18.00	70.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	93.00	13.00	12.00	68.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	91.00	17.00	9.00	65.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	90.00	4.00	15.00	71.00
........................................................................................................................TTGGTCCCCTTCAACCAGGTGT....................................................	22	1	89.00	80.00	0.00	9.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	86.00	17.00	11.00	58.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	85.00	8.00	9.00	68.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	84.00	10.00	19.00	55.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	84.00	11.00	37.00	36.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	84.00	3.00	19.00	62.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	82.00	11.00	4.00	67.00
........................................................................................................................TTGGTCCCCTTCAACCAGCAGT....................................................	22	1	82.00	0.00	0.00	82.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	79.00	12.00	33.00	34.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	78.00	13.00	12.00	53.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	78.00	8.00	36.00	34.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	75.00	2.00	13.00	60.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT..................................................	24	1	74.00	3.00	0.00	71.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	72.00	9.00	32.00	31.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	69.00	10.00	3.00	56.00
........................................................................................................................TTGGTCCCCATCAACCAGCTGT....................................................	22	1	66.00	2.00	3.00	61.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	62.00	7.00	3.00	52.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	59.00	2.00	8.00	49.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	55.00	6.00	12.00	37.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	54.00	10.00	5.00	39.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	54.00	4.00	3.00	47.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	52.00	4.00	12.00	36.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	50.00	7.00	3.00	40.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	47.00	3.00	5.00	39.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	47.00	1.00	1.00	45.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	42.00	5.00	9.00	28.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	42.00	5.00	9.00	28.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	41.00	6.00	3.00	32.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	39.00	9.00	2.00	28.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	37.00	8.00	3.00	26.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	36.00	5.00	0.00	31.00
........................................................................................................................TTGGTxCCCTTCAACCAGCTGT....................................................	21	1	33.00	2.00	8.00	23.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	31.00	2.00	13.00	16.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	31.00	3.00	0.00	28.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	30.00	3.00	14.00	13.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTG.....................................................	20	1	28.00	0.00	0.00	28.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	28.00	6.00	5.00	17.00
...........................................................................................................................TTCCCCTTCAACCAGCTGT....................................................	19	1	25.00	2.00	1.00	22.00
........................................................................................................................TTGGTCCCCTTCAACCTGT.......................................................	19	1	23.00	1.00	5.00	17.00
........................................................................................................................TTGGTCCCCTACAACCAGCTGT....................................................	22	1	23.00	2.00	5.00	16.00
...........................................................................................................................GTCCCCTTCAACCAGCTGT....................................................	19	1	23.00	2.00	3.00	18.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	19.00	4.00	3.00	12.00
............................................................................................................................TCCCCTTCAACCAGCTGT....................................................	18	1	19.00	0.00	2.00	17.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTA.....................................................	21	1	19.00	2.00	0.00	17.00
........................................................................................................................TTGGTCCCCTTCAACGAGCTGT....................................................	22	1	18.00	0.00	4.00	14.00
........................................................................................................................TTGGTCCCATTCAACCAGCTG.....................................................	21	1	17.00	2.00	0.00	15.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGA....................................................	22	1	17.00	0.00	0.00	17.00
........................................................................................................................TTGGTCCACTTCAACCAGCTG.....................................................	21	1	17.00	0.00	0.00	17.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTG.....................................................	21	1	16.00	0.00	0.00	16.00
...............................................................................AGCTGGTTGACATCGGGTCA...............................................................................................	20	1	16.00	4.00	0.00	12.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTG.....................................................	21	1	16.00	0.00	1.00	15.00
........................................................................................................................TTGGTCCCCTTCAACCAGC.......................................................	19	1	16.00	0.00	0.00	16.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTGGTC................................................	26	1	16.00	1.00	11.00	4.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	16.00	1.00	0.00	15.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTG.....................................................	21	1	15.00	0.00	0.00	15.00
........................................................................................................................TTGGTCCACTTCAACCAGCT......................................................	20	1	15.00	0.00	0.00	15.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	14.00	3.00	8.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCG.....................................................	21	1	14.00	0.00	0.00	14.00
........................................................................................................................TTGGTCCCCTTGAACCAGCTGT....................................................	22	1	14.00	1.00	0.00	13.00
........................................................................................................................TTGGTACCCTTCAACCAGCT......................................................	20	1	14.00	0.00	0.00	14.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	14.00	0.00	3.00	11.00
........................................................................................................................TTGGTCCCAATCAACCAGCTGT....................................................	22	1	13.00	0.00	0.00	13.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	13.00	3.00	0.00	10.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT..................................................	24	1	13.00	0.00	1.00	12.00
........................................................................................................................TTGGTCCCATTCAACCAGCT......................................................	20	1	12.00	0.00	0.00	12.00
........................................................................................................................TTGGTCCCCTTCAACCAGCAG.....................................................	21	1	12.00	0.00	0.00	12.00
........................................................................................................................TTGGTCCCCTTCAACCAGAT......................................................	20	1	12.00	1.00	0.00	11.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTG.....................................................	21	1	12.00	2.00	0.00	10.00

droYak2

TATTC--CA-GAA----------------------------------TTT--------CCTCCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTT-CCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAGT-ACGA----------------GTAAAC	Size	Hit Count	Total Norm	V046 Embryo	V052 Head	V120 Male body	V058 Head	M026 Head
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	109676.00	1252.00	37982.00	10993.00	52500.00	6949.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	7407.00	51.00	1447.00	177.00	1888.00	3844.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	1792.00	2.00	108.00	31.00	304.00	1347.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	1775.00	1.00	660.00	90.00	974.00	50.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	1532.00	20.00	599.00	4.00	906.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	1311.00	5.00	535.00	62.00	686.00	23.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	1305.00	3.00	52.00	4.00	65.00	1181.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	808.00	3.00	147.00	19.00	631.00	8.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	807.00	2.00	52.00	0.00	753.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	739.00	10.00	275.00	11.00	443.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	525.00	114.00	111.00	21.00	173.00	106.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	389.00	2.00	86.00	8.00	293.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	339.00	2.00	29.00	11.00	293.00	4.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	310.00	3.00	57.00	35.00	206.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	270.00	2.00	94.00	45.00	128.00	1.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	260.00	115.00	12.00	4.00	46.00	83.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	256.00	4.00	68.00	3.00	181.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	211.00	1.00	77.00	15.00	115.00	3.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	204.00	0.00	149.00	1.00	49.00	5.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	200.00	3.00	71.00	10.00	115.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	186.00	1.00	65.00	6.00	95.00	19.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	168.00	0.00	51.00	8.00	90.00	19.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	162.00	3.00	41.00	2.00	107.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	150.00	1.00	57.00	8.00	84.00	0.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	150.00	1.00	48.00	5.00	94.00	2.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	147.00	2.00	46.00	5.00	91.00	3.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	142.00	2.00	52.00	6.00	81.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	141.00	1.00	53.00	13.00	72.00	2.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	135.00	0.00	36.00	3.00	95.00	1.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	130.00	1.00	36.00	3.00	90.00	0.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	130.00	1.00	48.00	10.00	68.00	3.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	124.00	0.00	4.00	6.00	0.00	114.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	122.00	0.00	41.00	4.00	77.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	121.00	0.00	8.00	10.00	102.00	1.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	121.00	0.00	35.00	5.00	27.00	54.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	120.00	2.00	36.00	1.00	81.00	0.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	118.00	1.00	29.00	0.00	88.00	0.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	113.00	4.00	45.00	3.00	61.00	0.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	113.00	1.00	42.00	8.00	61.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	111.00	1.00	35.00	8.00	63.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	111.00	1.00	51.00	14.00	42.00	3.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	110.00	4.00	30.00	5.00	69.00	2.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	106.00	1.00	34.00	3.00	65.00	3.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	104.00	0.00	28.00	9.00	65.00	2.00
........................................................................................................................TTGGTCCCCTTCACCCCGCTGT....................................................	22	1	100.00	0.00	10.00	0.00	90.00	0.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	99.00	3.00	40.00	10.00	46.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	98.00	1.00	7.00	0.00	90.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	96.00	0.00	9.00	8.00	38.00	41.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	92.00	2.00	10.00	0.00	78.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	90.00	0.00	30.00	7.00	53.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	87.00	1.00	34.00	3.00	48.00	1.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	83.00	0.00	33.00	3.00	46.00	1.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	82.00	1.00	26.00	2.00	52.00	1.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	79.00	1.00	29.00	5.00	42.00	2.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	78.00	0.00	24.00	4.00	49.00	1.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	76.00	0.00	23.00	8.00	43.00	2.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	75.00	0.00	15.00	6.00	43.00	11.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	71.00	0.00	21.00	0.00	50.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	71.00	1.00	48.00	2.00	18.00	2.00
........................................................................................................................TTGGTCCCCTTCCACCCGCTGT....................................................	22	1	70.00	0.00	27.00	0.00	43.00	0.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	66.00	1.00	24.00	2.00	36.00	3.00
........................................................................................................................TTGCACCCCTTCAACCAGCTGT....................................................	22	1	62.00	0.00	8.00	0.00	54.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	61.00	0.00	9.00	2.00	50.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	60.00	2.00	25.00	8.00	22.00	3.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	59.00	0.00	10.00	7.00	19.00	23.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTG.....................................................	21	1	56.00	0.00	25.00	0.00	27.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	56.00	0.00	13.00	2.00	39.00	2.00
........................................................................................................................TGGGTCCCCTTCTACCAGCTGT....................................................	22	1	53.00	0.00	16.00	0.00	37.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	52.00	1.00	18.00	5.00	25.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT..................................................	24	1	52.00	0.00	21.00	2.00	29.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	52.00	16.00	13.00	0.00	15.00	8.00
........................................................................................................................TTGGTCCCCTTCCCCCAGCTGT....................................................	22	1	49.00	0.00	2.00	0.00	47.00	0.00
........................................................................................................................TTGGGCCCCTTCCACCAGCTGT....................................................	22	1	45.00	0.00	9.00	0.00	36.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCT......................................................	20	1	44.00	0.00	14.00	0.00	30.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	42.00	0.00	16.00	3.00	22.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	42.00	0.00	17.00	1.00	24.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	41.00	0.00	20.00	5.00	15.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGG.....................................................	21	1	40.00	0.00	0.00	0.00	4.00	36.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	40.00	1.00	10.00	0.00	27.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGC.......................................................	19	1	39.00	0.00	2.00	0.00	4.00	33.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGC....................................................	22	1	39.00	0.00	15.00	0.00	21.00	3.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTG.....................................................	21	1	38.00	0.00	15.00	0.00	23.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	37.00	0.00	10.00	3.00	24.00	0.00
........................................................................................................................TTGGTCCCCTTCTACCTGCTGT....................................................	22	1	37.00	0.00	4.00	0.00	33.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	37.00	1.00	7.00	3.00	24.00	2.00
........................................................................................................................TTGGGCACCTTCAACCAGCTGT....................................................	22	1	36.00	0.00	6.00	0.00	30.00	0.00
........................................................................................................................TGGGTCCCCTGCAACCAGCTGT....................................................	22	1	35.00	0.00	13.00	0.00	22.00	0.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	33.00	0.00	3.00	0.00	30.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	32.00	0.00	3.00	2.00	22.00	5.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTG.....................................................	21	1	31.00	0.00	1.00	0.00	30.00	0.00
........................................................................................................................TTGGACACCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	9.00	0.00	21.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGC....................................................	22	1	30.00	0.00	7.00	0.00	22.00	1.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	10.00	2.00	17.00	1.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	29.00	1.00	4.00	5.00	19.00	0.00
........................................................................................................................TTGGGCCCCGTCAACCAGCTGT....................................................	22	1	29.00	0.00	7.00	0.00	22.00	0.00
........................................................................................................................TTGCTCCCCTTCTACCAGCTGT....................................................	22	1	29.00	0.00	8.00	0.00	21.00	0.00
........................................................................................................................TGGGTCCCCGTCAACCAGCTGT....................................................	22	1	27.00	0.00	3.00	0.00	24.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGC....................................................	22	1	26.00	0.00	3.00	0.00	21.00	2.00
........................................................................................................................TTGGGCCCCTTCAACCCGCTGT....................................................	22	1	26.00	0.00	6.00	0.00	20.00	0.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	26.00	0.00	6.00	0.00	17.00	3.00
........................................................................................................................ATGGGCCCCTTCAACCAGCTGT....................................................	22	1	25.00	0.00	4.00	0.00	21.00	0.00

droEre2

ATTT-------------------------------------------------------CCTCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTT--CCTAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGCCAACTAAAT-TCGA----------------GTGAAC	Size	Hit Count	Total Norm	V040 Embryo	V060 Head	V047 Embryo	V108 Head
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	124317.00	1543.00	26894.00	0.00	95880.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	8113.00	82.00	1357.00	0.00	6674.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	3666.00	11.00	400.00	0.00	3255.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	2498.00	1.00	15.00	0.00	2482.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	2137.00	1.00	24.00	0.00	2112.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	1485.00	88.00	92.00	0.00	1305.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	1268.00	7.00	312.00	0.00	949.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	1265.00	4.00	149.00	0.00	1112.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	1240.00	7.00	16.00	0.00	1217.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	998.00	1.00	29.00	0.00	968.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	717.00	1.00	24.00	0.00	692.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	618.00	2.00	47.00	0.00	569.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	569.00	0.00	19.00	0.00	550.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	561.00	76.00	32.00	0.00	453.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	552.00	13.00	58.00	0.00	481.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	498.00	2.00	79.00	0.00	417.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	390.00	2.00	5.00	0.00	383.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	364.00	24.00	256.00	0.00	84.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	322.00	4.00	99.00	0.00	219.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	290.00	2.00	101.00	0.00	187.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	271.00	6.00	11.00	0.00	254.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	270.00	3.00	207.00	0.00	60.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	265.00	1.00	57.00	0.00	207.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	208.00	14.00	27.00	0.00	167.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	195.00	2.00	18.00	0.00	175.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	165.00	2.00	26.00	0.00	137.00
........................................................................................................................TTGGTCCCATTCAACCAGCTG.....................................................	21	1	163.00	1.00	2.00	0.00	160.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	158.00	5.00	69.00	0.00	84.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	155.00	1.00	8.00	0.00	146.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	154.00	6.00	24.00	0.00	124.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	149.00	3.00	33.00	0.00	113.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	147.00	1.00	39.00	0.00	107.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	146.00	0.00	1.00	0.00	145.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	141.00	3.00	31.00	0.00	107.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	141.00	7.00	102.00	0.00	32.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	137.00	3.00	61.00	0.00	73.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	135.00	1.00	27.00	0.00	107.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	135.00	1.00	27.00	0.00	107.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	132.00	0.00	23.00	0.00	109.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	128.00	1.00	26.00	0.00	101.00
........................................................................................................................TTGGTCCACTTCAACCAGCTG.....................................................	21	1	127.00	0.00	2.00	0.00	125.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	126.00	0.00	52.00	0.00	74.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	120.00	2.00	45.00	0.00	73.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	120.00	3.00	17.00	0.00	100.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	119.00	1.00	22.00	0.00	96.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	119.00	14.00	80.00	0.00	25.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	118.00	6.00	27.00	0.00	85.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	113.00	2.00	30.00	0.00	81.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	105.00	0.00	19.00	0.00	86.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	100.00	5.00	57.00	0.00	38.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	99.00	1.00	0.00	0.00	98.00
........................................................................................................................TTGGTCCCATTCAACCAGCT......................................................	20	1	97.00	0.00	1.00	0.00	96.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	90.00	3.00	27.00	0.00	60.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	86.00	9.00	26.00	0.00	51.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	84.00	2.00	22.00	0.00	60.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	82.00	2.00	4.00	0.00	76.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	81.00	2.00	70.00	0.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	79.00	5.00	25.00	0.00	49.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	79.00	0.00	19.00	0.00	60.00
........................................................................................................................TTGGTCCACTTCAACCAGCT......................................................	20	1	77.00	0.00	1.00	0.00	76.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	72.00	2.00	12.00	0.00	58.00
........................................................................................................................TTGGTCACCTTCAACCAGCTG.....................................................	21	1	71.00	0.00	0.00	0.00	71.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT..................................................	24	1	70.00	0.00	10.00	0.00	60.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	63.00	1.00	11.00	0.00	51.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	62.00	3.00	9.00	0.00	50.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	62.00	1.00	18.00	0.00	43.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	61.00	5.00	14.00	0.00	42.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	59.00	0.00	17.00	0.00	42.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	52.00	1.00	3.00	0.00	48.00
........................................................................................................................TTGGTACCCTTCAACCAGCTG.....................................................	21	1	51.00	0.00	1.00	0.00	50.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	50.00	2.00	37.00	0.00	11.00
........................................................................................................................TTGGTCCCCTTCAACCATCTG.....................................................	21	1	50.00	1.00	2.00	0.00	47.00
........................................................................................................................TTGGTCCCCTTCAACCATCT......................................................	20	1	49.00	0.00	1.00	0.00	48.00
........................................................................................................................TTGGTCCCCTTCAACCAGATG.....................................................	21	1	46.00	0.00	0.00	0.00	46.00
........................................................................................................................TTGGTCCCCTTCAAxCAGCTGT....................................................	21	1	45.00	1.00	0.00	0.00	44.00
........................................................................................................................TTGGTxCCCTTCAACCAGCTGT....................................................	21	1	43.00	0.00	2.00	0.00	41.00
........................................................................................................................TTTGTCCCCTTCAACCAGCT......................................................	20	1	42.00	0.00	0.00	0.00	42.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	39.00	2.00	4.00	0.00	33.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTG.....................................................	21	1	39.00	1.00	4.00	0.00	34.00
........................................................................................................................TTGGTCACCTTCAACCAGCT......................................................	20	1	36.00	0.00	0.00	0.00	36.00
...........................................................................................................................GTCCCCTTCAACCAGCTGT....................................................	19	1	34.00	0.00	5.00	0.00	29.00
........................................................................................................................TTGGTCCACTTCAACAAGCTGT....................................................	22	1	33.00	0.00	1.00	0.00	32.00
........................................................................................................................TTGGTACCATTCAACCAGCTGT....................................................	22	1	33.00	0.00	0.00	0.00	33.00
........................................................................................................................TTGGTCCCATTCAACCAG........................................................	18	1	32.00	0.00	2.00	0.00	30.00
........................................................................................................................TTGGTCACATTCAACCAGCTGT....................................................	22	1	32.00	0.00	0.00	0.00	32.00
........................................................................................................................TTGGTCCCATTCAACAAGCTGT....................................................	22	1	31.00	2.00	1.00	0.00	28.00
........................................................................................................................TTGGTCCCCATCAACCAGCTGT....................................................	22	1	30.00	0.00	7.00	0.00	23.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGTT...................................................	23	1	30.00	0.00	0.00	0.00	30.00
........................................................................................................................TTGGTCCCATTCAACCAGATGT....................................................	22	1	30.00	0.00	1.00	0.00	29.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	30.00	1.00	8.00	0.00	21.00
........................................................................................................................TTGGTCCCCTTCAACGAGCTGT....................................................	22	1	30.00	0.00	3.00	0.00	27.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTG.....................................................	20	1	30.00	0.00	0.00	0.00	30.00
........................................................................................................................TTGGTACCCTTCAACCAGCT......................................................	20	1	29.00	0.00	1.00	0.00	28.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTAT..................................................	24	1	29.00	0.00	7.00	0.00	22.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTGGTC................................................	26	1	29.00	0.00	0.00	0.00	29.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	27.00	1.00	8.00	0.00	18.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTG.....................................................	21	1	27.00	0.00	0.00	0.00	27.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTG.....................................................	21	1	26.00	0.00	0.00	0.00	26.00
........................................................................................................................TTGGTCACCTTCAACAAGCTGT....................................................	22	1	26.00	1.00	2.00	0.00	23.00
........................................................................................................................TTGGTCCCCTTCAAGCAGCTGT....................................................	22	1	25.00	0.00	6.00	0.00	19.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	25.00	4.00	16.00	0.00	5.00

droEug1

TTTTCCAGA-AAA----------------------------------TGA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTACTTTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTCGTTGACAACGAATT-TCGA----------------GTGAAA

Size

Hit Count

Total Norm

droBia1

TGTTT--AA--AA----------------------------------TCA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGCTGACAGCGGAGT-ACGA----------------GTGAAC

Size

Hit Count

Total Norm

droTak1

TATTT--AA-AAA----------------------------------TGA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAC-TTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACTCGAC-ACTA----------------GTGAAC

Size

Hit Count

Total Norm

droEle1

TATTA--AACAAA----------------------------------TTA--------TTACCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCAAAGTATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC

Size

Hit Count

Total Norm

droRho1

TATTA--AACAAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGGTGACAACGAAAT-ACGA----------------GTGAAC

Size

Hit Count

Total Norm

droFic1

TATTC--AA-AAA----------------------------------TTA--------TTATCTGCAAC-GCTGTGTGTAGCTGGTTGACATCGGGTCAGATCTGT-TTTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAGCCAGTGGTTGATGACAACGAAAC-CCGA----------------GTGAAC

Size

Hit Count

Total Norm

droKik1

TATTT--AA-AAT----------------------------------TTA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-TGTTTCCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACGAAAT-ACGA----------------GTGAAC

Size

Hit Count

Total Norm

droAna3

TT--C--GT-GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-CTTT-TCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA	Size	Hit Count	Total Norm	V105 Male body	V106 Head	V055 Unknown	V039 Embryo
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	69497.00	10308.00	21623.00	37295.00	271.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	4900.00	260.00	2053.00	2586.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	4218.00	203.00	1890.00	2103.00	22.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	1638.00	84.00	717.00	836.00	1.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	1397.00	24.00	1293.00	63.00	17.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	738.00	26.00	7.00	703.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	483.00	85.00	236.00	162.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	466.00	11.00	14.00	440.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	449.00	91.00	293.00	63.00	2.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	447.00	14.00	391.00	40.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	356.00	78.00	224.00	54.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	350.00	3.00	322.00	8.00	17.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	345.00	11.00	26.00	307.00	1.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	336.00	33.00	166.00	136.00	1.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	318.00	15.00	31.00	271.00	1.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	313.00	34.00	142.00	137.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	301.00	29.00	2.00	269.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	288.00	121.00	135.00	32.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	264.00	28.00	79.00	157.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	211.00	72.00	66.00	72.00	1.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	203.00	16.00	49.00	137.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	179.00	3.00	4.00	168.00	4.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	175.00	26.00	35.00	114.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	168.00	9.00	83.00	76.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	145.00	13.00	7.00	122.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	132.00	6.00	50.00	75.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	130.00	36.00	54.00	37.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-.................................................	24	1	120.00	3.00	52.00	65.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	116.00	12.00	15.00	89.00	0.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	115.00	29.00	41.00	45.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	114.00	47.00	40.00	27.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	109.00	2.00	102.00	5.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	109.00	5.00	4.00	100.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	104.00	13.00	10.00	81.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	103.00	19.00	2.00	79.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	97.00	5.00	43.00	49.00	0.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	96.00	17.00	0.00	79.00	0.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	96.00	8.00	28.00	60.00	0.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	95.00	12.00	14.00	69.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	92.00	1.00	11.00	79.00	1.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	91.00	17.00	12.00	62.00	0.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	91.00	7.00	21.00	63.00	0.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	89.00	13.00	21.00	54.00	1.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	86.00	6.00	13.00	67.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	85.00	34.00	11.00	39.00	1.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	83.00	16.00	14.00	53.00	0.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	82.00	20.00	7.00	55.00	0.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	77.00	12.00	13.00	52.00	0.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	76.00	5.00	3.00	68.00	0.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	75.00	8.00	25.00	42.00	0.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	74.00	1.00	2.00	71.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	74.00	3.00	16.00	53.00	2.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	73.00	7.00	9.00	56.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	72.00	4.00	22.00	46.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	72.00	18.00	24.00	29.00	1.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	70.00	18.00	2.00	50.00	0.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	62.00	9.00	27.00	25.00	1.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	61.00	0.00	0.00	61.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCT......................................................	20	1	60.00	0.00	0.00	60.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	58.00	28.00	9.00	21.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	55.00	1.00	3.00	51.00	0.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	54.00	8.00	21.00	24.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	52.00	4.00	12.00	36.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	51.00	7.00	17.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	49.00	9.00	1.00	39.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCT......................................................	20	1	48.00	1.00	45.00	2.00	0.00
........................................................................................................................TTGGTCCCCTTGAACCAGCTGT....................................................	22	1	44.00	38.00	0.00	6.00	0.00
........................................................................................................................TTGGTCCCCTACAACCAGCTGT....................................................	22	1	44.00	26.00	2.00	16.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCT......................................................	20	1	43.00	2.00	34.00	7.00	0.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	42.00	2.00	10.00	29.00	1.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	42.00	0.00	0.00	42.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	42.00	0.00	0.00	42.00	0.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	40.00	2.00	11.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTA.....................................................	21	1	37.00	3.00	26.00	8.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCA...............................................................................................	20	1	36.00	1.00	33.00	2.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	36.00	0.00	36.00	0.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	36.00	14.00	16.00	6.00	0.00
........................................................................................................................TGGGGCCCCTTCAACCAGCTGT....................................................	22	1	35.00	0.00	0.00	35.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCT......................................................	20	1	35.00	0.00	0.00	35.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTG.....................................................	21	1	35.00	0.00	1.00	34.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGC....................................................	22	1	35.00	0.00	0.00	35.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTG-.................................................	24	1	34.00	1.00	29.00	4.00	0.00
........................................................................................................................TTGGTCCCCTTCAACGAGCTGT....................................................	22	1	34.00	18.00	8.00	8.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	33.00	3.00	7.00	23.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	32.00	4.00	13.00	15.00	0.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	31.00	2.00	4.00	25.00	0.00
........................................................................................................................TTGGGCCCCGTCAACCAGCTGT....................................................	22	1	31.00	0.00	0.00	31.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	31.00	7.00	11.00	13.00	0.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	31.00	2.00	7.00	20.00	2.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	30.00	0.00	0.00	30.00	0.00
........................................................................................................................TTGCACCCCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	0.00	30.00	0.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	30.00	5.00	1.00	24.00	0.00
........................................................................................................................TTGGGCACCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	0.00	30.00	0.00
........................................................................................................................TAGGACCCCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	0.00	30.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCTG.....................................................	21	1	29.00	3.00	21.00	4.00	1.00
........................................................................................................................TTGGTCCCGTTCAACCAGCTGT....................................................	22	1	29.00	5.00	5.00	19.00	0.00
........................................................................................................................TTGGACCCCTTCAACAAGCTGT....................................................	22	1	28.00	0.00	0.00	28.00	0.00
........................................................................................................................TGGGCCCCCTTCAACCAGCTGT....................................................	22	1	27.00	0.00	0.00	27.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTG.....................................................	21	1	26.00	1.00	2.00	23.00	0.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	26.00	3.00	10.00	13.00	0.00
...............................................................................ATCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	25.00	0.00	25.00	0.00	0.00

droBip1

TTTGT-----GAA----------------------------------TGA--------TTATCTGCAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAC-GTTTTTCAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAAGT-ACAA----------------GTGAAA

Size

Hit Count

Total Norm

dp4

GACGC--GT-GTG----------------------------------TGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGTGCCAACAAATAATAAAG	Size	Hit Count	Total Norm	V112 Male body	V043 Embryo	V051 Head	M022 Male body
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	50463.00	6085.00	3811.00	40548.00	19.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	2674.00	100.00	218.00	2289.00	67.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	839.00	82.00	23.00	734.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	661.00	52.00	13.00	596.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	229.00	5.00	14.00	210.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	220.00	2.00	16.00	202.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	215.00	25.00	150.00	40.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	200.00	50.00	9.00	141.00	0.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	190.00	2.00	3.00	185.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	188.00	4.00	32.00	152.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	175.00	13.00	148.00	13.00	1.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	167.00	2.00	25.00	139.00	1.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	165.00	0.00	9.00	156.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	146.00	11.00	19.00	116.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	94.00	3.00	31.00	60.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	87.00	2.00	3.00	82.00	0.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	86.00	2.00	7.00	77.00	0.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	86.00	2.00	2.00	82.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	79.00	0.00	12.00	67.00	0.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	79.00	2.00	4.00	73.00	0.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	77.00	8.00	12.00	57.00	0.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	71.00	7.00	6.00	58.00	0.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	66.00	1.00	16.00	49.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	66.00	2.00	12.00	52.00	0.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	63.00	2.00	4.00	57.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-.................................................	24	1	60.00	0.00	1.00	59.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	60.00	8.00	2.00	50.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	58.00	0.00	10.00	46.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	57.00	6.00	4.00	47.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	54.00	5.00	7.00	42.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	54.00	6.00	4.00	44.00	0.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	53.00	3.00	5.00	45.00	0.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	52.00	5.00	4.00	43.00	0.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	48.00	5.00	5.00	38.00	0.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	47.00	7.00	5.00	35.00	0.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	47.00	3.00	4.00	40.00	0.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	47.00	6.00	3.00	38.00	0.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	46.00	6.00	6.00	34.00	0.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	45.00	6.00	4.00	35.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	44.00	3.00	3.00	38.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	44.00	1.00	1.00	42.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	43.00	4.00	0.00	39.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	41.00	3.00	4.00	34.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	41.00	2.00	2.00	37.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	38.00	3.00	4.00	31.00	0.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	38.00	0.00	2.00	36.00	0.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	38.00	2.00	4.00	32.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	37.00	2.00	4.00	31.00	0.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	35.00	0.00	5.00	30.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	33.00	3.00	1.00	29.00	0.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	3.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	30.00	0.00	8.00	22.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	29.00	2.00	0.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	29.00	7.00	2.00	20.00	0.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	28.00	2.00	6.00	20.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	26.00	3.00	2.00	21.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	24.00	0.00	2.00	22.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	24.00	0.00	6.00	18.00	0.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	23.00	3.00	2.00	18.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	23.00	0.00	2.00	21.00	0.00
........................................................................................................................TTGGACACCTTCAACCAGCTGT....................................................	22	1	22.00	0.00	9.00	13.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	22.00	1.00	4.00	17.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	20.00	2.00	2.00	16.00	0.00
........................................................................................................................TTGGACCCCTTCAACAAGCTGT....................................................	22	1	20.00	0.00	2.00	18.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	20.00	0.00	1.00	19.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	20.00	1.00	3.00	16.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGG....................................................	22	1	19.00	0.00	1.00	18.00	0.00
........................................................................................................................TTGGGCACCTTCAACCAGCTGT....................................................	22	1	19.00	0.00	3.00	16.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	18.00	3.00	2.00	13.00	0.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	17.00	0.00	0.00	17.00	0.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	17.00	0.00	2.00	15.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	17.00	1.00	1.00	15.00	0.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	17.00	1.00	2.00	14.00	0.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	16.00	0.00	4.00	12.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	16.00	1.00	12.00	3.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCCGCTGT....................................................	22	1	15.00	0.00	0.00	15.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	14.00	0.00	1.00	13.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCCGCTGT....................................................	22	1	13.00	0.00	6.00	7.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGG....................................................	22	1	13.00	0.00	4.00	9.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	13.00	0.00	2.00	11.00	0.00
........................................................................................................................TGGGTCCCATTCAACCAGCTGT....................................................	22	1	13.00	0.00	0.00	13.00	0.00
........................................................................................................................TTGGTCCCCTACAACCAGCTGT....................................................	22	1	12.00	1.00	0.00	11.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGC....................................................	22	1	12.00	0.00	0.00	12.00	0.00
........................................................................................................................TGGGTCCACTTCAACCAGCTGT....................................................	22	1	12.00	0.00	2.00	10.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	12.00	3.00	0.00	9.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGCT...................................................	23	1	12.00	0.00	0.00	12.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTG.....................................................	21	1	11.00	0.00	0.00	11.00	0.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTG.....................................................	21	1	11.00	0.00	0.00	11.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTG.....................................................	21	1	11.00	0.00	1.00	10.00	0.00
........................................................................................................................TGGGGCCCCTTCAACCAGCTGT....................................................	22	1	10.00	0.00	1.00	9.00	0.00
........................................................................................................................TGGGTCCCCTTCATCCAGCTGT....................................................	22	1	10.00	0.00	1.00	9.00	0.00
........................................................................................................................TAGGACCCCTTCAACCAGCTGT....................................................	22	1	10.00	0.00	0.00	10.00	0.00
........................................................................................................................TTGGACCACTTCAACCAGCTGT....................................................	22	1	10.00	0.00	2.00	8.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTG.....................................................	21	1	10.00	0.00	0.00	10.00	0.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	10.00	0.00	2.00	8.00	0.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	10.00	1.00	1.00	8.00	0.00
........................................................................................................................TGGGTCCCCGTCAACCAGCTGT....................................................	22	1	9.00	0.00	0.00	9.00	0.00
........................................................................................................................TTGCACCCCTTCAACCAGCTGT....................................................	22	1	9.00	0.00	0.00	9.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	9.00	0.00	0.00	9.00	0.00
........................................................................................................................TTGGACTCCTTCAACCAGCTGT....................................................	22	1	9.00	0.00	0.00	9.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCAGT....................................................	22	1	9.00	0.00	0.00	9.00	0.00

droPer1

TATTT--GT-ATGTG--TATTT---------GTATGTGACGCGTGTGTGC--------TTATGTACAACGGCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTTA-TCAAGTATTTGGTCCCCTTCAACCAGCTGTAT-CAGTGGTTGATTCCAACAAAAA-ACAAAAGGCGCCAACAAATAATAAAG	Size	Hit Count	Total Norm	V111 Male body	V042 Embryo	V050 Head	V057 Head	M021 Embryo
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	117400.00	1983.00	1040.00	33932.00	80067.00	378.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	3774.00	28.00	78.00	1695.00	1877.00	96.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	2552.00	27.00	6.00	695.00	1824.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	1653.00	2.00	4.00	91.00	1555.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	1122.00	11.00	8.00	435.00	667.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	942.00	0.00	5.00	197.00	715.00	25.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	938.00	0.00	2.00	80.00	856.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	708.00	0.00	4.00	47.00	657.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	484.00	0.00	14.00	123.00	347.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	456.00	1.00	0.00	70.00	383.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	372.00	20.00	4.00	158.00	190.00	0.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	342.00	18.00	10.00	48.00	255.00	11.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	318.00	0.00	3.00	165.00	150.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	310.00	0.00	1.00	43.00	266.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	305.00	0.00	1.00	55.00	249.00	0.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	302.00	1.00	1.00	60.00	240.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	250.00	1.00	1.00	69.00	179.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	236.00	3.00	1.00	30.00	202.00	0.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	232.00	3.00	2.00	29.00	198.00	0.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	223.00	0.00	1.00	11.00	211.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	195.00	0.00	2.00	23.00	103.00	67.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	192.00	1.00	3.00	39.00	149.00	0.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	186.00	1.00	0.00	37.00	148.00	0.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	181.00	0.00	2.00	74.00	104.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	177.00	1.00	0.00	27.00	149.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	175.00	1.00	0.00	77.00	97.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	169.00	0.00	1.00	43.00	125.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-.................................................	24	1	164.00	3.00	0.00	34.00	127.00	0.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	161.00	0.00	1.00	32.00	128.00	0.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	161.00	0.00	0.00	11.00	150.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	160.00	2.00	0.00	15.00	142.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	159.00	0.00	0.00	51.00	108.00	0.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	158.00	0.00	0.00	25.00	133.00	0.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	155.00	2.00	4.00	53.00	96.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	154.00	0.00	0.00	31.00	123.00	0.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	152.00	0.00	1.00	25.00	126.00	0.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	151.00	0.00	0.00	34.00	117.00	0.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	145.00	0.00	0.00	9.00	136.00	0.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	144.00	0.00	0.00	8.00	136.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	142.00	0.00	1.00	27.00	114.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	142.00	4.00	1.00	38.00	99.00	0.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	138.00	0.00	5.00	29.00	104.00	0.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	137.00	1.00	0.00	39.00	97.00	0.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	135.00	0.00	1.00	43.00	91.00	0.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	132.00	0.00	0.00	18.00	114.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	130.00	1.00	1.00	25.00	101.00	2.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	118.00	0.00	2.00	36.00	80.00	0.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	112.00	1.00	1.00	8.00	102.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	107.00	1.00	0.00	14.00	91.00	1.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	106.00	4.00	16.00	18.00	42.00	26.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	106.00	3.00	0.00	48.00	55.00	0.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	105.00	0.00	4.00	19.00	81.00	1.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	104.00	3.00	1.00	34.00	66.00	0.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	99.00	1.00	0.00	36.00	62.00	0.00
........................................................................................................................TTGCACCCCTTCAACCAGCTGT....................................................	22	1	99.00	0.00	0.00	12.00	87.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	99.00	2.00	1.00	9.00	83.00	4.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	94.00	1.00	0.00	29.00	64.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	88.00	4.00	0.00	28.00	56.00	0.00
........................................................................................................................TGGGGCCCCTTCAACCAGCTGT....................................................	22	1	88.00	0.00	0.00	3.00	85.00	0.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	86.00	0.00	0.00	2.00	84.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	85.00	1.00	1.00	13.00	68.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	84.00	1.00	0.00	30.00	53.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	82.00	0.00	1.00	5.00	76.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	82.00	0.00	1.00	17.00	64.00	0.00
........................................................................................................................TTGGACCCCTTCAACAAGCTGT....................................................	22	1	79.00	0.00	1.00	9.00	69.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	78.00	0.00	0.00	10.00	68.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	76.00	0.00	1.00	13.00	62.00	0.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	75.00	1.00	1.00	28.00	45.00	0.00
........................................................................................................................TTGGACACCTTCAACCAGCTGT....................................................	22	1	72.00	0.00	0.00	7.00	65.00	0.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	70.00	0.00	0.00	3.00	67.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	67.00	0.00	0.00	7.00	60.00	0.00
........................................................................................................................TGGGCCCCCTTCAACCAGCTGT....................................................	22	1	67.00	0.00	0.00	7.00	60.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGC....................................................	22	1	67.00	0.00	0.00	6.00	61.00	0.00
........................................................................................................................TTGGGCACCTTCAACCAGCTGT....................................................	22	1	65.00	0.00	0.00	4.00	61.00	0.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	64.00	0.00	0.00	19.00	43.00	2.00
........................................................................................................................TAGGACCCCTTCAACCAGCTGT....................................................	22	1	62.00	0.00	0.00	2.00	60.00	0.00
........................................................................................................................ATGGGCCCCTTCAACCAGCTGT....................................................	22	1	61.00	0.00	0.00	1.00	60.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGC....................................................	22	1	60.00	0.00	0.00	2.00	58.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGC....................................................	22	1	59.00	0.00	0.00	4.00	55.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	58.00	0.00	0.00	29.00	29.00	0.00
........................................................................................................................TTGGGCCCCTTCCACCAGCTGT....................................................	22	1	56.00	0.00	0.00	5.00	51.00	0.00
........................................................................................................................TGGGTCCCATTCAACCAGCTGT....................................................	22	1	56.00	0.00	0.00	7.00	49.00	0.00
........................................................................................................................TTGGACTCCTTCAACCAGCTGT....................................................	22	1	56.00	0.00	0.00	6.00	50.00	0.00
........................................................................................................................TTGGGCCCCGTCAACCAGCTGT....................................................	22	1	54.00	0.00	0.00	1.00	53.00	0.00
........................................................................................................................TGGGTCCCCTGCAACCAGCTGT....................................................	22	1	53.00	0.00	0.00	5.00	48.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	52.00	0.00	0.00	13.00	39.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGC....................................................	22	1	49.00	0.00	0.00	12.00	37.00	0.00
........................................................................................................................TGGGTCCCCTTCTACCAGCTGT....................................................	22	1	49.00	0.00	0.00	2.00	47.00	0.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	48.00	1.00	0.00	10.00	34.00	3.00
........................................................................................................................TGGGTCCACTTCAACCAGCTGT....................................................	22	1	47.00	0.00	1.00	6.00	40.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	47.00	1.00	0.00	14.00	31.00	1.00
........................................................................................................................TTGGTCCCCTTCACCCCGCTGT....................................................	22	1	44.00	0.00	0.00	7.00	37.00	0.00
........................................................................................................................TTGGGCGCCTTCAACCAGCTGT....................................................	22	1	43.00	0.00	0.00	2.00	41.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGC....................................................	22	1	43.00	0.00	0.00	7.00	36.00	0.00
........................................................................................................................GTGGGCCCCTTCAACCAGCTGT....................................................	22	1	42.00	0.00	1.00	0.00	41.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	41.00	0.00	1.00	17.00	23.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCAGT....................................................	22	1	41.00	0.00	1.00	16.00	24.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTG.....................................................	21	1	40.00	0.00	0.00	7.00	33.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGTT...................................................	23	1	39.00	0.00	0.00	2.00	37.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGC....................................................	22	1	39.00	0.00	1.00	4.00	34.00	0.00

droWil1

T---------------------------------------------------------------ACAAC-ACTGAATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTATTTGAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATCCCAACAAAAA-GCA-----------------ATGGAA	Size	Hit Count	Total Norm	V117 Male body	V118 Embryo	V119 Head	M020 Head
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	82880.00	6492.00	22244.00	33342.00	20802.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	20279.00	103.00	409.00	3203.00	16564.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	7048.00	108.00	111.00	6637.00	192.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	4302.00	56.00	2704.00	1225.00	317.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	2859.00	10.00	38.00	86.00	2725.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	2731.00	1.00	3.00	6.00	2721.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	2343.00	8.00	1688.00	472.00	175.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	868.00	49.00	206.00	613.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	647.00	7.00	25.00	61.00	554.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	415.00	12.00	20.00	55.00	328.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	350.00	5.00	42.00	49.00	254.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	346.00	4.00	18.00	37.00	287.00
...............................................................................AGCTGGTTGACATCGGGTCAG..............................................................................................	21	1	278.00	1.00	78.00	180.00	19.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	274.00	2.00	96.00	168.00	8.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	260.00	0.00	90.00	163.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	258.00	10.00	51.00	165.00	32.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	224.00	20.00	65.00	98.00	41.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	218.00	4.00	14.00	35.00	165.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	171.00	0.00	22.00	145.00	4.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	161.00	1.00	36.00	121.00	3.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	160.00	10.00	30.00	113.00	7.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTG.....................................................	20	1	158.00	0.00	2.00	21.00	135.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	157.00	1.00	28.00	128.00	0.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	157.00	1.00	26.00	128.00	2.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	140.00	1.00	6.00	132.00	1.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	124.00	5.00	15.00	31.00	73.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTG.....................................................	21	1	119.00	0.00	2.00	12.00	105.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	107.00	6.00	6.00	17.00	78.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	105.00	6.00	9.00	56.00	34.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	103.00	6.00	19.00	32.00	46.00
........................................................................................................................TTGGTCCCCTTCAACCAGC.......................................................	19	1	102.00	1.00	0.00	1.00	100.00
...........................................................................................................................GTCCCCTTCAACCAGCTGT....................................................	19	1	101.00	0.00	1.00	15.00	85.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	99.00	2.00	18.00	50.00	29.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	98.00	12.00	20.00	58.00	8.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	95.00	7.00	46.00	30.00	12.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	90.00	6.00	19.00	53.00	12.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	87.00	6.00	27.00	48.00	6.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	87.00	10.00	14.00	52.00	11.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	86.00	5.00	21.00	48.00	12.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	86.00	9.00	16.00	47.00	14.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	85.00	2.00	12.00	54.00	17.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGC....................................................	21	1	83.00	0.00	0.00	0.00	83.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGG.....................................................	21	1	83.00	0.00	0.00	0.00	83.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	81.00	4.00	22.00	48.00	7.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	80.00	0.00	0.00	5.00	75.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	78.00	2.00	5.00	70.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	77.00	5.00	4.00	59.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	77.00	5.00	4.00	61.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGG....................................................	22	1	76.00	0.00	0.00	0.00	76.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	76.00	1.00	20.00	49.00	6.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	76.00	1.00	49.00	22.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	72.00	3.00	12.00	55.00	2.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	71.00	0.00	7.00	63.00	1.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	68.00	4.00	16.00	34.00	14.00
...........................................................................................................................TTCCCCTTCAACCAGCTGT....................................................	19	1	67.00	2.00	2.00	5.00	58.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	66.00	6.00	21.00	33.00	6.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGG....................................................	21	1	66.00	0.00	0.00	0.00	66.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	62.00	1.00	32.00	29.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	60.00	1.00	5.00	54.00	0.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	59.00	4.00	16.00	34.00	5.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTG.....................................................	21	1	52.00	0.00	0.00	5.00	47.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	52.00	1.00	22.00	28.00	1.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	50.00	4.00	9.00	29.00	8.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	47.00	2.00	7.00	14.00	24.00
.......................................................................................................TxT-TAATTTGAAGTATTTGGT.....................................................................	20	1	46.00	3.00	42.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTG.....................................................	21	1	44.00	0.00	2.00	1.00	41.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	44.00	3.00	10.00	27.00	4.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	44.00	4.00	17.00	16.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	44.00	2.00	5.00	36.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	42.00	6.00	4.00	28.00	4.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	42.00	0.00	0.00	1.00	41.00
........................................................................................................................TTGGTCCCCTTCAAxCAGCTGT....................................................	21	1	42.00	0.00	1.00	32.00	9.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTG.....................................................	21	1	41.00	1.00	1.00	9.00	30.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	41.00	1.00	13.00	20.00	7.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGG....................................................	22	1	40.00	0.00	0.00	0.00	40.00
........................................................................................................................TTGGTCCACTTCAACCAGCT......................................................	20	1	40.00	0.00	1.00	39.00	0.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	39.00	3.00	7.00	22.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGC....................................................	22	1	37.00	0.00	0.00	0.00	37.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTG.....................................................	21	1	37.00	0.00	0.00	2.00	35.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	35.00	3.00	7.00	24.00	1.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGC....................................................	22	1	35.00	0.00	0.00	0.00	35.00
............................................................................................................................TCCCCTTCAACCAGCTGT....................................................	18	1	33.00	1.00	1.00	1.00	30.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGG....................................................	22	1	32.00	0.00	0.00	0.00	32.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	32.00	1.00	8.00	22.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTG.....................................................	21	1	31.00	0.00	0.00	0.00	31.00
........................................................................................................................TTGGTACCCTTCAACCAGCT......................................................	20	1	28.00	0.00	0.00	28.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTG.....................................................	21	1	28.00	0.00	2.00	16.00	10.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGC....................................................	22	1	27.00	0.00	0.00	0.00	27.00
........................................................................................................................TTGGTCCCCTTCAACCAGAT......................................................	20	1	27.00	0.00	0.00	27.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCT......................................................	20	1	27.00	0.00	0.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTG.....................................................	21	1	26.00	0.00	0.00	9.00	17.00
........................................................................................................................TTGGTCCCCTTCAACAAGCT......................................................	20	1	26.00	0.00	0.00	26.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGC....................................................	22	1	26.00	0.00	0.00	0.00	26.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGG....................................................	22	1	26.00	0.00	0.00	0.00	26.00
...............................................................................AGCTGGTTGACATCGGGTCA...............................................................................................	20	1	25.00	0.00	5.00	19.00	1.00
........................................................................................................................TTGGTCCACTTCAACCAGCTG.....................................................	21	1	25.00	0.00	0.00	18.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCTGT.......................................................	19	1	25.00	2.00	4.00	18.00	1.00
...............................................................................AGCTGGTTGACATCGGGCCAGAT............................................................................................	23	1	24.00	0.00	19.00	5.00	0.00
...........................................................................................................................GTCCCCTTCAACCAGCTG.....................................................	18	1	24.00	0.00	0.00	0.00	24.00
........................................................................................................................TTGGTCCCCTTCAAACAGCT......................................................	20	1	24.00	0.00	0.00	24.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCC......................................................	20	1	23.00	0.00	0.00	9.00	14.00

droVir3

CAAAC--GA-AGATA--TATATTGCCAATCGAA--------------TC---------ACATTCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTAT-TTCT-GAAAGCATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGAAGCCAACAA------------------------------	Size	Hit Count	Total Norm	V116 Male body	V053 Unknown	V047 Embryo	M027 Male body	M028 Head
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	21944.00	5119.00	12031.00	1062.00	305.00	3427.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	5553.00	113.00	1291.00	17.00	952.00	3180.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	1846.00	107.00	1692.00	1.00	4.00	42.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	796.00	17.00	19.00	2.00	62.00	696.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	742.00	7.00	124.00	10.00	34.00	567.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	491.00	98.00	357.00	14.00	3.00	19.00
...............................................................................AGTTGGTTGACATCGGGTCAGAT............................................................................................	23	1	125.00	11.00	66.00	21.00	9.00	18.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	115.00	1.00	112.00	2.00	0.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	110.00	3.00	103.00	2.00	0.00	2.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	95.00	5.00	83.00	3.00	0.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	74.00	45.00	24.00	5.00	0.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	74.00	2.00	68.00	2.00	0.00	2.00
...............................................................................AGTTGGTTGACATCGGGTCAGA.............................................................................................	22	1	62.00	7.00	13.00	36.00	0.00	6.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGG.....................................................	21	1	54.00	0.00	2.00	1.00	17.00	34.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	47.00	2.00	35.00	7.00	0.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	47.00	1.00	39.00	6.00	0.00	1.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	47.00	9.00	30.00	4.00	0.00	4.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	45.00	2.00	4.00	0.00	4.00	35.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	44.00	3.00	35.00	5.00	0.00	1.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	44.00	12.00	28.00	1.00	1.00	2.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	43.00	0.00	40.00	2.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	42.00	5.00	34.00	3.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	36.00	4.00	25.00	0.00	0.00	7.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	33.00	3.00	15.00	2.00	2.00	11.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	30.00	1.00	26.00	1.00	0.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	30.00	5.00	21.00	2.00	0.00	2.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	30.00	2.00	22.00	3.00	0.00	3.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	29.00	4.00	22.00	2.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-.................................................	24	1	28.00	3.00	25.00	0.00	0.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	28.00	5.00	2.00	4.00	1.00	16.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	28.00	1.00	17.00	3.00	0.00	7.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	27.00	0.00	26.00	0.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	26.00	1.00	16.00	9.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	25.00	4.00	21.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	23.00	5.00	12.00	0.00	0.00	6.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	23.00	5.00	18.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	22.00	3.00	16.00	0.00	0.00	3.00
...........................................................................................................................GTCCCCTTCAACCAGCTGT....................................................	19	1	22.00	2.00	3.00	0.00	1.00	16.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	22.00	0.00	17.00	3.00	0.00	2.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	22.00	4.00	17.00	0.00	0.00	1.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	22.00	4.00	14.00	1.00	3.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCT......................................................	20	1	22.00	1.00	21.00	0.00	0.00	0.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	22.00	4.00	14.00	3.00	0.00	1.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	21.00	4.00	13.00	2.00	1.00	1.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	20.00	3.00	12.00	3.00	0.00	2.00
........................................................................................................................TTGGACCCCTTCAACCAGCT......................................................	20	1	20.00	0.00	20.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	20.00	4.00	14.00	2.00	0.00	0.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTG.....................................................	21	1	19.00	1.00	0.00	0.00	6.00	12.00
........................................................................................................................TTGGTCCCCTTCAACCAGC.......................................................	19	1	19.00	0.00	7.00	0.00	0.00	12.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	19.00	8.00	8.00	1.00	0.00	2.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	19.00	2.00	14.00	1.00	0.00	2.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	19.00	1.00	18.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	18.00	3.00	12.00	2.00	0.00	1.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	18.00	1.00	4.00	2.00	0.00	11.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	18.00	1.00	15.00	1.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	17.00	2.00	12.00	3.00	0.00	0.00
........................................................................................................................TGGGTCACCTTCAACCAGCTGT....................................................	22	1	17.00	0.00	17.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	16.00	4.00	10.00	2.00	0.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTG.....................................................	21	1	15.00	0.00	4.00	0.00	0.00	11.00
........................................................................................................................TGGGTCCCCGTCAACCAGCTGT....................................................	22	1	15.00	0.00	14.00	1.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	15.00	5.00	7.00	3.00	0.00	0.00
........................................................................................................................TTGGACCCCTTCAACCAGCTG.....................................................	21	1	15.00	0.00	11.00	0.00	1.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	15.00	8.00	7.00	0.00	0.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTG.....................................................	20	1	15.00	0.00	1.00	0.00	3.00	11.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	14.00	0.00	14.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	14.00	3.00	8.00	1.00	0.00	2.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	14.00	0.00	14.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	14.00	1.00	13.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTG.....................................................	21	1	14.00	0.00	14.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	13.00	0.00	13.00	0.00	0.00	0.00
............................................................................................................................TCCCCTTCAACCAGCTGT....................................................	18	1	13.00	1.00	3.00	0.00	2.00	7.00
........................................................................................................................TTGGTCACCGTCAACCAGCTGT....................................................	22	1	13.00	0.00	13.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	12.00	2.00	7.00	0.00	0.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	12.00	1.00	11.00	0.00	0.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTG.....................................................	21	1	11.00	0.00	10.00	0.00	0.00	1.00
........................................................................................................................TTGGGCCCCTTCAACCAGCT......................................................	20	1	11.00	0.00	11.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	11.00	0.00	11.00	0.00	0.00	0.00
........................................................................................................................TTGGTCACCTTCAACCAGCTG.....................................................	21	1	11.00	1.00	9.00	0.00	0.00	1.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	11.00	1.00	9.00	0.00	0.00	1.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	11.00	3.00	4.00	2.00	0.00	2.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	11.00	1.00	9.00	0.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	10.00	3.00	6.00	1.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	10.00	2.00	7.00	1.00	0.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGC....................................................	21	1	10.00	0.00	0.00	0.00	0.00	10.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGC....................................................	22	1	10.00	0.00	10.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTA.....................................................	21	1	10.00	1.00	1.00	0.00	0.00	8.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGG....................................................	21	1	10.00	0.00	0.00	0.00	0.00	10.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTG.....................................................	21	1	9.00	1.00	1.00	0.00	0.00	7.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	9.00	1.00	7.00	0.00	0.00	1.00
........................................................................................................................TTGGTCCCCTTCACCCAGCT......................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTG.....................................................	21	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTG.....................................................	21	1	8.00	0.00	7.00	0.00	1.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCC......................................................	20	1	8.00	0.00	3.00	0.00	1.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCCGCT......................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCG.....................................................	21	1	8.00	1.00	6.00	0.00	0.00	1.00
........................................................................................................................CTGGTCACCTTCAACCAGCTGT....................................................	22	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	8.00	1.00	6.00	0.00	1.00	0.00
........................................................................................................................TGGGGCCCCTTCAACCAGCTGT....................................................	22	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TGGGTCCCCTTCAACCAGCT......................................................	20	1	8.00	0.00	8.00	0.00	0.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTG.....................................................	21	1	7.00	1.00	6.00	0.00	0.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCT......................................................	20	1	7.00	0.00	7.00	0.00	0.00	0.00

droMoj3

CATGA--AATAAA-T--TGTGT---------------------TGTGTACTCAAACAAACATCCACAAC-GCTGTGTGTAGTTGGTTGACATCGGGTCAGATCTGT-TTT--TCGAGAATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGACAACAAGT----------------------------	Size	Hit Count	Total Norm	V110 Male body	V056 Unknown	V049 Head	V041 Embryo
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	108552.00	9951.00	53267.00	44606.00	728.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	3743.00	148.00	1972.00	1616.00	7.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	2616.00	133.00	1355.00	1119.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	2287.00	138.00	1169.00	980.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	2148.00	2.00	178.00	1961.00	7.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGT....................................................	22	1	786.00	0.00	74.00	703.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	462.00	70.00	213.00	178.00	1.00
........................................................................................................................TTGGGCCCCTTCAACCAGCTGT....................................................	22	1	441.00	2.00	262.00	174.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	430.00	9.00	281.00	136.00	4.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGT....................................................	22	1	416.00	0.00	131.00	282.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTT-.................................................	24	1	414.00	7.00	218.00	187.00	2.00
........................................................................................................................TGGGTCCCCTTCAACCAGCTGT....................................................	22	1	369.00	0.00	235.00	133.00	1.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	365.00	6.00	277.00	81.00	1.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	280.00	12.00	183.00	85.00	0.00
........................................................................................................................TTGGTCCCCTTCCACCCGCTGT....................................................	22	1	210.00	0.00	5.00	204.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	205.00	8.00	100.00	94.00	3.00
........................................................................................................................TTGGTCCCCTTCTACCAGCTGT....................................................	22	1	196.00	0.00	63.00	132.00	1.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	189.00	9.00	110.00	67.00	3.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	188.00	5.00	45.00	135.00	3.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	180.00	9.00	84.00	86.00	1.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	175.00	6.00	116.00	52.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	175.00	11.00	60.00	104.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	165.00	6.00	78.00	81.00	0.00
........................................................................................................................TTGGTCCCCTTCGACCAGCTGT....................................................	22	1	161.00	2.00	88.00	70.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGA....................................................	22	1	157.00	7.00	80.00	70.00	0.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	155.00	5.00	88.00	62.00	0.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	155.00	1.00	56.00	98.00	0.00
...............................................................................AGTTGGTTGACATCGGGTCAGAT............................................................................................	23	1	150.00	17.00	69.00	47.00	17.00
........................................................................................................................TTGGTCCCCTTCACCCCGCTGT....................................................	22	1	147.00	0.00	22.00	125.00	0.00
........................................................................................................................TTGGTCCACTTCAACCAGCTGT....................................................	22	1	146.00	13.00	91.00	40.00	2.00
........................................................................................................................TTGGTCCCCTTCAGCCAGCTGT....................................................	22	1	142.00	4.00	79.00	57.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTTT....................................................	22	1	139.00	3.00	28.00	108.00	0.00
........................................................................................................................TTGGTCCCCGTCAACCAGCTGT....................................................	22	1	136.00	1.00	78.00	57.00	0.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	135.00	12.00	79.00	41.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCGGCTGT....................................................	22	1	126.00	6.00	75.00	44.00	1.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	120.00	2.00	65.00	52.00	1.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	111.00	8.00	55.00	47.00	1.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	111.00	5.00	57.00	48.00	1.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	108.00	2.00	65.00	37.00	4.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	107.00	3.00	56.00	47.00	1.00
........................................................................................................................TTGGTCCTCTTCAACCAGCTGT....................................................	22	1	107.00	4.00	52.00	47.00	4.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	107.00	1.00	45.00	60.00	1.00
........................................................................................................................TTGGTCCCCTGCAACCAGCTGT....................................................	22	1	95.00	0.00	56.00	39.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	95.00	2.00	53.00	39.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTAT....................................................	22	1	94.00	6.00	31.00	56.00	1.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	93.00	3.00	36.00	52.00	2.00
.......................................................................................................................CTTGGTCCCCTTCAACCAGCTGT....................................................	23	1	92.00	1.00	52.00	38.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	88.00	4.00	44.00	39.00	1.00
........................................................................................................................TTGGTCCCCTTCAACTAGCTGT....................................................	22	1	85.00	4.00	40.00	40.00	1.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	82.00	0.00	30.00	51.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGTT...................................................	23	1	82.00	0.00	12.00	70.00	0.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	81.00	8.00	32.00	41.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	77.00	3.00	50.00	24.00	0.00
.........................................................................................................................TGGTCCCCTTCAACCAGCTGT....................................................	21	1	73.00	2.00	39.00	30.00	2.00
........................................................................................................................TTGGTCCCCTTCAATCAGCTGT....................................................	22	1	72.00	2.00	38.00	32.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	66.00	0.00	38.00	28.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	60.00	6.00	26.00	28.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	59.00	3.00	14.00	41.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTG.....................................................	21	1	58.00	0.00	7.00	51.00	0.00
........................................................................................................................ATGGTCCCCTTCAACCAGCTGT....................................................	22	1	58.00	2.00	31.00	25.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTT.....................................................	21	1	56.00	3.00	29.00	24.00	0.00
...............................................................................AGTTGGTTGACATCGGGTCAGA.............................................................................................	22	1	54.00	5.00	18.00	9.00	22.00
........................................................................................................................TGGGACCCCTTCAACCAGCTGT....................................................	22	1	53.00	0.00	48.00	5.00	0.00
........................................................................................................................TGGGTCCCCTTCTACCAGCTGT....................................................	22	1	53.00	0.00	17.00	36.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCT......................................................	20	1	50.00	0.00	3.00	47.00	0.00
........................................................................................................................TTGGTCCGCTTCAACCAGCTGT....................................................	22	1	50.00	1.00	33.00	16.00	0.00
..........................................................................................................................GGTCCCCTTCAACCAGCTGT....................................................	20	1	49.00	4.00	22.00	23.00	0.00
........................................................................................................................TTGGTCCCCTTAAACCAGCTGT....................................................	22	1	49.00	3.00	17.00	28.00	1.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	49.00	7.00	19.00	23.00	0.00
........................................................................................................................TTGGGCCCCTGCAACCAGCTGT....................................................	22	1	48.00	0.00	33.00	15.00	0.00
........................................................................................................................TTGCACCCCTTCAACCAGCTGT....................................................	22	1	48.00	0.00	31.00	17.00	0.00
........................................................................................................................TTGGACCCCTTCAACAAGCTGT....................................................	22	1	47.00	0.00	39.00	8.00	0.00
........................................................................................................................GTGGTCCCCTTCAACCAGCTGT....................................................	22	1	47.00	3.00	24.00	19.00	1.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	45.00	5.00	19.00	21.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGTTGT....................................................	22	1	42.00	2.00	23.00	16.00	1.00
........................................................................................................................TTGTTCCCCTTCAACCAGCTGT....................................................	22	1	41.00	16.00	13.00	12.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTA-.................................................	24	1	40.00	0.00	20.00	20.00	0.00
........................................................................................................................TTGCTCCCCTTCTACCAGCTGT....................................................	22	1	40.00	0.00	9.00	31.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGC....................................................	22	1	39.00	0.00	14.00	25.00	0.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	38.00	0.00	28.00	10.00	0.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	37.00	0.00	30.00	7.00	0.00
........................................................................................................................TGGGTCCCCGTCAACCAGCTGT....................................................	22	1	35.00	0.00	23.00	12.00	0.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	35.00	3.00	16.00	16.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTTG-.................................................	24	1	35.00	1.00	24.00	10.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCGGT....................................................	22	1	34.00	0.00	27.00	7.00	0.00
........................................................................................................................TTGGGCACCTTCAACCAGCTGT....................................................	22	1	33.00	0.00	22.00	11.00	0.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	32.00	2.00	18.00	11.00	1.00
........................................................................................................................TTGGTCCCCTTCCACCAGCTGTT...................................................	23	1	32.00	0.00	5.00	27.00	0.00
........................................................................................................................TTGGTCCCCTTCACCCAGCTGC....................................................	22	1	32.00	0.00	22.00	10.00	0.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGCT...................................................	23	1	32.00	0.00	15.00	17.00	0.00
........................................................................................................................TTGGACACCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	23.00	7.00	0.00
........................................................................................................................TGGCTCCCCTTCAACCAGCTGT....................................................	22	1	30.00	0.00	16.00	14.00	0.00
........................................................................................................................TGGGTCCCCTGCAACCAGCTGT....................................................	22	1	30.00	0.00	22.00	8.00	0.00
.........................................................................................................................TTGTCCCCTTCAACCAGCTGT....................................................	21	1	27.00	9.00	10.00	8.00	0.00
........................................................................................................................TTGGTCCCCTACAACCAGCTGT....................................................	22	1	27.00	1.00	16.00	10.00	0.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGC....................................................	22	1	27.00	0.00	21.00	6.00	0.00
........................................................................................................................TTGGGCCCCTTCCACCAGCTGT....................................................	22	1	26.00	0.00	6.00	20.00	0.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	25.00	0.00	16.00	9.00	0.00
........................................................................................................................TGGGGCCCCTTCAACCAGCTGT....................................................	22	1	24.00	0.00	19.00	5.00	0.00
........................................................................................................................TTGGACTCCTTCAACCAGCTGT....................................................	22	1	24.00	0.00	19.00	5.00	0.00

droGri2

CAAAC--AA-AACTATATACATGATTAATTTGAA-------------T----------TTATTTACAAC-GCTGTATGTAGCTGGTTGACATCGGGTCAGATCTAT-TTAT-TCGAGTATTTGGTCCCCTTCAACCAGCTGTAG-CAGTGGTTGATGTCAACAAGTGAACTTAAG-----AAC-AATAGTGAAA	Size	Hit Count	Total Norm	V109 Male body
........................................................................................................................TTGGTCCCCTTCAACCAGCTGT....................................................	22	1	1348.00	1348.00
........................................................................................................................TTGGTCCCCTTCAACCACCTGT....................................................	22	1	20.00	20.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTG.....................................................	21	1	14.00	14.00
........................................................................................................................TTGGTCCCCTTCAACCAG........................................................	18	1	11.00	11.00
........................................................................................................................TTGGTCCCCTTCAACCAACTGT....................................................	22	1	10.00	10.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTT...................................................	23	1	9.00	9.00
........................................................................................................................TTCGTCCCCTTCAACCAGCTGT....................................................	22	1	9.00	9.00
........................................................................................................................TTGGTCCCCTTCAACCATCTGT....................................................	22	1	8.00	8.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTGT....................................................	22	1	6.00	6.00
........................................................................................................................TTGGTACCCTTCAACCAGCTGT....................................................	22	1	6.00	6.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGC....................................................	22	1	5.00	5.00
........................................................................................................................TCGGTCCCCTTCAACCAGCTGT....................................................	22	1	4.00	4.00
........................................................................................................................TTGGTCACCTTCAACCAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTGGCCCCCTTCAACCAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTAGTCCCCTTCAACCAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTGGTCCCCTTCAACCAGCT......................................................	20	1	3.00	3.00
........................................................................................................................TTGGTCCCCTTCAACAAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTGGTGCCCTTCAACCAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTGGTCCCCCTCAACCAGCTGT....................................................	22	1	3.00	3.00
........................................................................................................................TTGGACCCCTTCAACCAGCTGT....................................................	22	1	3.00	3.00
...............................................................................AGCTGGTTGACATCGGGTCAGAT............................................................................................	23	1	3.00	3.00
........................................................................................................................TTTGTCCCCTTCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCATTCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGATCCCCTTCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTCCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTTAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCCGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCTCCTTCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCGCCTTCAACCAGCTGT....................................................	22	1	2.00	2.00
...............................................................................AGCTGGTTGACATCGGGTCAGA.............................................................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGATGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTTCCCTTCAACCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTCATCCAGCTGT....................................................	22	1	2.00	2.00
........................................................................................................................TTGGTCCCCTTCAACCAGCAGT....................................................	22	1	1.00	1.00
.......................................................................................................TAT-TTAT-TCGAGTATTTGGT.....................................................................	20	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTA...................................................	23	1	1.00	1.00
........................................................................................................................TTAGTCCCCTTCAACCAGCT......................................................	20	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCTGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTCT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGG....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCCGCTG.....................................................	21	1	1.00	1.00
........................................................................................................................CTGGTCCCCTTCAACCAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAAACAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAGCTGTC...................................................	23	1	1.00	1.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGC....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCAACTG.....................................................	21	1	1.00	1.00
........................................................................................................................TTGGTCCCCCTCACCCAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTACAACCAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGCTCCCCTTCAACCAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTTGTCCCCTTCAACCCGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TAGGTCCCCTTCAACCAGCTGT....................................................	22	1	1.00	1.00
........................................................................................................................TTGGTCCCCTTCAACCTGT.......................................................	19	1	1.00	1.00
........................................................................................................................TTGGTCCCTTTCAACCAGCTG.....................................................	21	1	1.00	1.00
.......................................................................................................................CTTGGTTCCCTTCAACCAGCTGT....................................................	23	1	1.00	1.00

Generated: 04/20/2012 at 05:20:22 EDT

dme-mir-133

chr2L:20616617-20616714 +

Known_mirbase

intergenic

20-way Fast Statistical Aligner (FSA) re-alignment

Visually pleasing best hits from LASTZ and MAF

Legend

Re-alignment after removal of non-confident orthologs

20-way Secondary Structure

Small RNA-seq read pileup