Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
UUGCC----------------------UGCUG------------CCCUUAUUAGAGGAUUCUGCUCA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUAU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGGUG--------U--GUGGCAUAUUCA----C-------------------------------ACU-U-AG---UCUUAG--------------------------------CAGUGU |
| view | Chimp |
UUGCC----------------------UGCUG------------CCCUUAUUAGAGGAUUCUGCUCA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUAU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------ACU-U-AG---UCUUAG--------------------------------CAGUGU |
| view | Rhesus |
UUGCC----------------------UGCUG------------CCCUUAUUAGAGGAUUGUGCUCA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUAU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------ACU-U-AG---CCUUAG--------------------------------CAGUGU |
| view | Bushbaby |
UUGCC----------------------UUCUG------------CCCUUACUGGAGAAUUCUGCUAA-----------UGCCGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUAU--UAG-------------ACCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GCAGCAUAUUCAUUCAC-------------------------------AUU-U-AG---UCUUGG--------------------------------CAGUGU |
| view | Tree Shrew |
UUGCC----------------------UACUG------------UCCUUAAAAGAGAAUUCUGCUCA-----------UGCUGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UUGGGAUUG--UAG-------------ACCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------AUU-U-AU---UCUUGG--------------------------------CUGCAU |
| view | Horse |
UUGCC----------------------UGCUG------------CCCUUGCUGGAGGAUUCUGCUCA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----U-------------------------------AUU-U-AG---UCUUGG--------------------------------CACUGU |
| view | Armadillo |
UUAGC-----------------------------------------CUUGCUAUAGGAUUCUGUUCA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUGCAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------ACA-U-AG---UCUGGA--------------------------------UAGUGU |
| view | Cat |
UUGCA----------------------UGCUG------------CCCU-GCUAGAGGAUUCUGCUCA-----------UGCCGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----U-------------------------------ACU-U-AG---UCUUGG--------------------------------CACUGU |
| view | Dog |
UUGUC----------------------UACUG------------UCCUUGCUAGAGGAUUCUGCUCA-----------UGCCGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U---UGGCAUAUUCA----U-------------------------------ACU-U-AG---UCUUGG--------------------------------CACUGU |
| view | Elephant |
UUAAC-UUUGUUGUUCUUGCCUGCUGCUCUUG------------CUCUUGCUAGAGAAUUCUGCUCA-----------UGCCGGAGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACCUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------AUU-U-AG---CCUUGG--------------------------------CAGUGU |
| view | Cow |
UUGCC----------------------UGCUG------------CUGUUGCUAGAGGACUCUGCUCA-----------UGCUGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUUGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUAGCACAUUCA----C-------------------------------AUU-U-AG---UCUUAA--------------------------------CACUGU |
| view | Rabbit |
UUGCC----------------------UGCUU------------CCCUUGCUGGAUGACUCUGCUCA-----------UGCCGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUAAGAAGAUAACUAUACAACUUACUACUUUCCCUGA==--------U--GUGGCAUGUUCA----C-------------------------------------AC---UCUUGG--------------------------------CAGUGU |
| view | Guinea Pig |
UUACC----------------------UGCUG------------CCCUUAUUAAAAUAUCCCGCUUG-----------UGCUGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAAGGAUUU--AAG-------------GCCCC--AUUAAGAAGAUAACUAUACGACUUACUACUUUCCCUGG==--------U--AUAGCAUACUCA----C--------------------------------UU-G-AG---UCUUGG--------------------------------CAGUGU |
| view | HedgeHog |
UUCCC----------------------UGAUA------------UCCCUGCUAAAGAAUUCUGCUCA-----------UGUCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------ACCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--GUGGCAUAUUCA----C-------------------------------ACU-UUAG---UCUUGA--------------------------------CAGUAG |
| view | Mouse |
UUGCC----------------------UACUG------------CCCUUACUAGACACAUCUGCACA-----------UGCUGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AGUAAGAAGAUAACUAUACAACUUACUACUUUCCUUGG==--------U--GUGGCAUAUUCA----C-------------------------------AUU-A-AG---UCUUGG--------------------------------CAGUAU |
| view | Shrew |
UUUUC----------------------UUCUG------------CGCUUACUAAAG--UUUUGCUUA-----------UGCCAGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------ACCCC--AAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGG==--------U--CUAGCAUAUUCG----C-------------------------------ACU-U-AG---UCUUGG--------------------------------CAUUUG |
| view | Rat |
================================================================================================================================================================================================================================================================================================================= |
| view | Tenrec |
UUUACAUGUGUCAUUCUUACC-----CUGCUG------------CUCAUGCUAGAAGAUUCUGCUCA-----------UGCCAAGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--UAG-------------GCCCC--AAUUAGAAGAUAACUAUACAACCUACUACUUUCCUUGG==--------U--GUGGCACAUUCA----C-------------------------------AUU-U-AA---C--UAU--------------------------------CAGUUU |
| view | Opossum |
==========================================================UUCCAUCCU-----------CUCCAAAGAGGUGUAGUAAAAUUGGGCUAUUUGGGGA--UCGCGUUUU--UGGUUUGUUUGUAUUUGCCCC--AAUUAGAAGAUAAUUGUACAACUUCCUAUUUUCC-UGC==--------U--GUGGUAUGAUCA----CCUUGUUCACCAGGUGCUACCUUGGCCAAAACACC-C-AGGCCUCUGGG--------------------------------CACUGC |
| view | Platypus |
==========================================================---UGCCCA-----------UGCUGGGAUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUUCUUUU-------------GCCCC--AAUUAGC-GAUAACUAUACAAUUUACUACUUUCCCCAG==--------U--GUGGAACGAUCA----C---------------------------------U-G-GG---UCCUAG====================================== |
| view | Chicken |
================================================================================================================================================================================================================================================================================================================= |
| view | Lizard |
CUGCC----------------------UGGCA------------CUAAAGUUGAAUACAUUUACUUC-----------UGUUGGGGUGAGGUAGUAAG-UUGUAUUGUUGUGGGG--UAGGGAUUU--GUG-------------CCCCA--AAUCAGA-GAUAACUAUACAACUUACUACUUUCCCUAA==--------G--GUGAUAUA---A----C-------------------------------AAU-U-UU---CCUUAU-------------------------------------C |
| view | Frog |
==========================================================-UCUGCCCU-----------CUUCAGGAUGAGGUAGUAAG-UUGUAUUGUUGUGGGG------GUUUU--UAU-------------UUCCCCAAAUUAGGAGAUAACUAUACAGCUUACUGCCUUCCCUGC==--------C--AUGGUAAUUUAA----U-------------------------------UCUCU-GA---UGUUUG--------------------------------CACUGU |
| view | Zebrafish |
UAUUC----------------------GCUUGCAG-------------CUUUAAUAUG---------GGCUG------UGUUGUGGUGAGGUAGUAAG-UUGUGUUGUUGUUGGGGAUCAGUAUAG--UAU-------------GGCCC--UUGAAGGAGAUAACUAUACAAUUUACUGCCUUCCAUAA==================================================================================================================== |
| view | Stickleback |
==========================================================--------------------UGCUGUGGUGAGGUAGUAAG-UUGUGUUGUUGUUGGG-AUCAUGAUUG--UGC-------------ACCCU--GUUCAGGAGAUAACUAUACAACUUACUGCCUUCCUCAG==GAAAACGAUCAAUAACUAAUCCA----C-------------------------------A----------------UAUUGUGUGCUGUUCUCAUGUGUGCUAGCUUUGGACAU |
| view | Tetradon |
==========================================================--------------------UGCUGUGGUGAGGUAGUAAG-UUGUGUUGUUGUUGGGGAUCAAGAUUG--UGC-------------ACCCU--GUCAAGGAGAUAACUAUACAACUUACUGCCUUCCUCAG==GGC--UAAU--GUCAUCAGUGUG----A-------------------------------A----------------AAAU----------------------AACUUUAAACAC |
| view | Fugu |
UAGCA----------------------GAUCAUGAAUGUUGUGACCUGCUG---------------------UGGCCUUGCUGUGGUGAGGUAGUAAG-UUGUGUUGUUGUAGGGGA---AGAUUG--UGC-------------ACCCU--GUUCAGGAGAUAACUAUACAACUUACUGCCUUCCUCAG==GGCAGCAAUCCUUCGCCAAACUG----A-------------------------------A----------------AAAU-----------------GUCCCAACUCAACUCAC |
| view | Medaka |
UAACU----------------------GCCUAGAAA------AACCUCCACUAAAAGU--------------------UUCUGCGGUGAGGUAGUAAG-UUGUGUUGUUGUUGGGGAUCAAGUAUG--UGC-------------ACCCC--GCUCAGGAGAUAACUAUACAACUUACUGCCUUCCUCAG==GGCAGCAAU-----ACUACACCA----U-------------------------------A----------------CAGA------------CAUGUGGA------UGGGCCAU |
