Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
C-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGA |
| view | Chimp |
C-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UCCU------------GGGACACAAUGUGCUUCAAGGCCACU-GGGACAGUAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGA |
| view | Rhesus |
C-UGCU------------GGGAGACAAUGUGCUUCAAGGACACU-GGGACAGGAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UGCU------------GGGAGACAAUGUGCUUCAAGGACACU-GGGACAGGAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGAC-UGCU------------GGGAGACAAUGUGCUUCAAGGACACU-GGGACAGGAG------------------------AGGGA-GG-AAUCGCA-GAAAUCACUCCA------------------------------------------------GGAGCAACUGAGAGACCUUGCUUCUA--CUUUAC-CAGGUCCUGCUGG-CCCAGACGGACACCAA-GGCCCAAGA |
| view | Bushbaby |
------------------GGGAAACAAUGUGCUUUGAAGCUGCU-GGGGCAGGAG------------------------AGGGA-GG-AGGCACA-GAAGUAGGUCCA------------------------------------------------GGAGCCACUGAUGGACUUUGCUUCUG--CUUUAC-CAGGUCCUGCAGG-CCCUGAUGGACACCAA-GGCCCAAGA------------------GGGAAACAAUGUGCUUUGAAGCUGCU-GGGGCAGGAG------------------------AGGGA-GG-AGGCACA-GAAGUAGGUCCA------------------------------------------------GGAGCCACUGAUGGACUUUGCUUCUG--CUUUAC-CAGGUCCUGCAGG-CCCUGAUGGACACCAA-GGCCCAAGA------------------GGGAAACAAUGUGCUUUGAAGCUGCU-GGGGCAGGAG------------------------AGGGA-GG-AGGCACA-GAAGUAGGUCCA------------------------------------------------GGAGCCACUGAUGGACUUUGCUUCUG--CUUUAC-CAGGUCCUGCAGG-CCCUGAUGGACACCAA-GGCCCAAGA |
| view | Tree Shrew |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Horse |
C-UCCC---------CCAGGGAGG-AACUUGCUGAGAGGCUG-U-UGGACAGUGG------------------------AGGGA-GGGAGUCCCA-GG-GCAGCUCCC------------------------------------------------AGAGGCCCUGAGACACUGUGGUUCUG--AUUUCC-UAGGACCCGCUGG-CCCAGACGGACAGCAA-GGCCCAAGAC-UCCC---------CCAGGGAGG-AACUUGCUGAGAGGCUG-U-UGGACAGUGG------------------------AGGGA-GGGAGUCCCA-GG-GCAGCUCCC------------------------------------------------AGAGGCCCUGAGACACUGUGGUUCUG--AUUUCC-UAGGACCCGCUGG-CCCAGACGGACAGCAA-GGCCCAAGAC-UCCC---------CCAGGGAGG-AACUUGCUGAGAGGCUG-U-UGGACAGUGG------------------------AGGGA-GGGAGUCCCA-GG-GCAGCUCCC------------------------------------------------AGAGGCCCUGAGACACUGUGGUUCUG--AUUUCC-UAGGACCCGCUGG-CCCAGACGGACAGCAA-GGCCCAAGA |
| view | Armadillo |
C-UCCC--------GCCUGGGAGAUGCCCUGCUCCAAAGCUGCU-G-GGCAGUAG------------------------AGGCA-GGGAGUAGCU-GGAAUAGCUCCA------------------------------------------------GGAGUAACUGGUG-GCUUUGCUUCUG--CUUUAC-CAGGUCCCGCUGGGCCCCGACGGACACCAACGGCCCAAGAC-UCCC--------GCCUGGGAGAUGCCCUGCUCCAAAGCUGCU-G-GGCAGUAG------------------------AGGCA-GGGAGUAGCU-GGAAUAGCUCCA------------------------------------------------GGAGUAACUGGUG-GCUUUGCUUCUG--CUUUAC-CAGGUCCCGCUGGGCCCCGACGGACACCAACGGCCCAAGAC-UCCC--------GCCUGGGAGAUGCCCUGCUCCAAAGCUGCU-G-GGCAGUAG------------------------AGGCA-GGGAGUAGCU-GGAAUAGCUCCA------------------------------------------------GGAGUAACUGGUG-GCUUUGCUUCUG--CUUUAC-CAGGUCCCGCUGGGCCCCGACGGACACCAACGGCCCAAGA |
| view | Cat |
C-UCCC--------GCCUGGGAGACAACUGGCUGA-AGCCCG-U-GGGGCCAUCG------------------------AGGGA-GGGAGGCCCA-AAAGUAGCUCUU------------------------------------------------GGGGUAACUGGUGAUAUGUGGUUCUG--CUUUCC-UAGGACCCGCUGG-CCCUGAUGGACACCAA-GGCCCAAGAC-UCCC--------GCCUGGGAGACAACUGGCUGA-AGCCCG-U-GGGGCCAUCG------------------------AGGGA-GGGAGGCCCA-AAAGUAGCUCUU------------------------------------------------GGGGUAACUGGUGAUAUGUGGUUCUG--CUUUCC-UAGGACCCGCUGG-CCCUGAUGGACACCAA-GGCCCAAGAC-UCCC--------GCCUGGGAGACAACUGGCUGA-AGCCCG-U-GGGGCCAUCG------------------------AGGGA-GGGAGGCCCA-AAAGUAGCUCUU------------------------------------------------GGGGUAACUGGUGAUAUGUGGUUCUG--CUUUCC-UAGGACCCGCUGG-CCCUGAUGGACACCAA-GGCCCAAGA |
| view | Dog |
C-UCCC--------AUCUGGGAGGCAGCCUGGAGA-AGCU-----------------------------------------GCA-GGGCAUCCCA-GAAAUAGCUGCU------------------------------------------------GGGAUAACUGAGGAGCUGUGGUUCUG--CUUUCC-UAGGACCUGCUGG-CCCUGAUGGACACCAA-GGCCCAAGAC-UCCC--------AUCUGGGAGGCAGCCUGGAGA-AGCU-----------------------------------------GCA-GGGCAUCCCA-GAAAUAGCUGCU------------------------------------------------GGGAUAACUGAGGAGCUGUGGUUCUG--CUUUCC-UAGGACCUGCUGG-CCCUGAUGGACACCAA-GGCCCAAGAC-UCCC--------AUCUGGGAGGCAGCCUGGAGA-AGCU-----------------------------------------GCA-GGGCAUCCCA-GAAAUAGCUGCU------------------------------------------------GGGAUAACUGAGGAGCUGUGGUUCUG--CUUUCC-UAGGACCUGCUGG-CCCUGAUGGACACCAA-GGCCCAAGA |
| view | Elephant |
C-UUCC--------CACUGGGAGAAAACUUACUUCCAAACUGUU-GGGACAGAAG------------------------AGAGA-AGGAGGCACA-GAAAUAGCUCCA------------------------------------------------GGAGUGACUGGUG-GCUUUGGUUCUU--CUUUUC-CAGGUCCCGCUGG-CCCUGACGGACAACAA-GGCCCAAGAC-UUCC--------CACUGGGAGAAAACUUACUUCCAAACUGUU-GGGACAGAAG------------------------AGAGA-AGGAGGCACA-GAAAUAGCUCCA------------------------------------------------GGAGUGACUGGUG-GCUUUGGUUCUU--CUUUUC-CAGGUCCCGCUGG-CCCUGACGGACAACAA-GGCCCAAGAC-UUCC--------CACUGGGAGAAAACUUACUUCCAAACUGUU-GGGACAGAAG------------------------AGAGA-AGGAGGCACA-GAAAUAGCUCCA------------------------------------------------GGAGUGACUGGUG-GCUUUGGUUCUU--CUUUUC-CAGGUCCCGCUGG-CCCUGACGGACAACAA-GGCCCAAGA |
| view | Cow |
C-UCCCCCUCCCCCACCUAGGAGACAGCUUGUG---AGGCUG-U-AGGGUGGUUG------------------------AAGGA-GG-AGUCCCA-GG-GAAGCUCCC------------------------------------------------AGAGUCACUGAAAAGCUUUGAU-CUG--CUUUCC-CAGGACCCGCUGG-CCCUGACGGACAUCAA-GGCCCAAGAC-UCCCCCUCCCCCACCUAGGAGACAGCUUGUG---AGGCUG-U-AGGGUGGUUG------------------------AAGGA-GG-AGUCCCA-GG-GAAGCUCCC------------------------------------------------AGAGUCACUGAAAAGCUUUGAU-CUG--CUUUCC-CAGGACCCGCUGG-CCCUGACGGACAUCAA-GGCCCAAGAC-UCCCCCUCCCCCACCUAGGAGACAGCUUGUG---AGGCUG-U-AGGGUGGUUG------------------------AAGGA-GG-AGUCCCA-GG-GAAGCUCCC------------------------------------------------AGAGUCACUGAAAAGCUUUGAU-CUG--CUUUCC-CAGGACCCGCUGG-CCCUGACGGACAUCAA-GGCCCAAGA |
| view | Rabbit |
G-UCCC--------ACACGGGGGACAGCAUGCUGCAAAGC--CU-UGGGUAGGAG------------------------AGGGCCAG-AGCCGCA-GGCACAGCUCCA------------------------------------------------GCAGAGACUGAUGGGCCUUUCCUCUC--CUUUAC-CAGGUCCCGCUGG-CCCCGACGGACACCAA-GGCCCACGAG-UCCC--------ACACGGGGGACAGCAUGCUGCAAAGC--CU-UGGGUAGGAG------------------------AGGGCCAG-AGCCGCA-GGCACAGCUCCA------------------------------------------------GCAGAGACUGAUGGGCCUUUCCUCUC--CUUUAC-CAGGUCCCGCUGG-CCCCGACGGACACCAA-GGCCCACGAG-UCCC--------ACACGGGGGACAGCAUGCUGCAAAGC--CU-UGGGUAGGAG------------------------AGGGCCAG-AGCCGCA-GGCACAGCUCCA------------------------------------------------GCAGAGACUGAUGGGCCUUUCCUCUC--CUUUAC-CAGGUCCCGCUGG-CCCCGACGGACACCAA-GGCCCACGA |
| view | Guinea Pig |
--CCCU--------GCCUGGGAGGCGGUGUGCUCUGAGGCUGCU-AGGGCAGGAG------------------------AGGAA-AG-AGUCCCA-GACUCAGCUCAG------------------------------------------------GAAGUAAAUGACAGAUUUUGCAUUUCUGCUUUGC-CAGGCCCUGCUGG-CCCCGAUGGACUCCAA-GGUCCAAGA--CCCU--------GCCUGGGAGGCGGUGUGCUCUGAGGCUGCU-AGGGCAGGAG------------------------AGGAA-AG-AGUCCCA-GACUCAGCUCAG------------------------------------------------GAAGUAAAUGACAGAUUUUGCAUUUCUGCUUUGC-CAGGCCCUGCUGG-CCCCGAUGGACUCCAA-GGUCCAAGA--CCCU--------GCCUGGGAGGCGGUGUGCUCUGAGGCUGCU-AGGGCAGGAG------------------------AGGAA-AG-AGUCCCA-GACUCAGCUCAG------------------------------------------------GAAGUAAAUGACAGAUUUUGCAUUUCUGCUUUGC-CAGGCCCUGCUGG-CCCCGAUGGACUCCAA-GGUCCAAGA |
| view | HedgeHog |
C-CUCC---------ACAUGGAGACAACUGUAUCUGAGACUG-U-CUGACGGUGG------------------------AGGAA-GG-GGUUCUA-GGAGCAGUUCCU------------------------------------------------UGAGUGACUAAUGAGUUUUUUUCUUA--UUUCCC-UAGGACCCCCUGG-CCCUGAUGGACUCCAG-GGUCAAAGAC-CUCC---------ACAUGGAGACAACUGUAUCUGAGACUG-U-CUGACGGUGG------------------------AGGAA-GG-GGUUCUA-GGAGCAGUUCCU------------------------------------------------UGAGUGACUAAUGAGUUUUUUUCUUA--UUUCCC-UAGGACCCCCUGG-CCCUGAUGGACUCCAG-GGUCAAAGAC-CUCC---------ACAUGGAGACAACUGUAUCUGAGACUG-U-CUGACGGUGG------------------------AGGAA-GG-GGUUCUA-GGAGCAGUUCCU------------------------------------------------UGAGUGACUAAUGAGUUUUUUUCUUA--UUUCCC-UAGGACCCCCUGG-CCCUGAUGGACUCCAG-GGUCAAAGA |
| view | Mouse |
C-GCCU--------GCCUGGGAGACCACGUGCUCCAAGCCUACU-GGGGCAGGAGCUACUGGGAGCACUGAACUGGGGCAGGAG-GG-AGCACUG-AACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACAGACUUCACUUGUCUUCUUUCC-CAGGUCCGGCUGG-CGCUGAUGGACAGCAA-GGUUCCAGAC-GCCU--------GCCUGGGAGACCACGUGCUCCAAGCCUACU-GGGGCAGGAGCUACUGGGAGCACUGAACUGGGGCAGGAG-GG-AGCACUG-AACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACAGACUUCACUUGUCUUCUUUCC-CAGGUCCGGCUGG-CGCUGAUGGACAGCAA-GGUUCCAGAC-GCCU--------GCCUGGGAGACCACGUGCUCCAAGCCUACU-GGGGCAGGAGCUACUGGGAGCACUGAACUGGGGCAGGAG-GG-AGCACUG-AACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACUGGGGCAGGAGGGAGCACUGAACAGACUUCACUUGUCUUCUUUCC-CAGGUCCGGCUGG-CGCUGAUGGACAGCAA-GGUUCCAGA |
| view | Shrew |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Rat |
CCUUCC--------ACCAAGGAGGCCAUGUGCUCCAAGCCUAGU-GGGACAGGAG-----------------------------------------------------------------------------------------------------AGUGUAUUGAACAGACUUUACUUUUCUGCUCUAC-CAGGUCCCGCUGG-CCCCGAUGGACAGCAA-GGUUCCAGACCUUCC--------ACCAAGGAGGCCAUGUGCUCCAAGCCUAGU-GGGACAGGAG-----------------------------------------------------------------------------------------------------AGUGUAUUGAACAGACUUUACUUUUCUGCUCUAC-CAGGUCCCGCUGG-CCCCGAUGGACAGCAA-GGUUCCAGACCUUCC--------ACCAAGGAGGCCAUGUGCUCCAAGCCUAGU-GGGACAGGAG-----------------------------------------------------------------------------------------------------AGUGUAUUGAACAGACUUUACUUUUCUGCUCUAC-CAGGUCCCGCUGG-CCCCGAUGGACAGCAA-GGUUCCAGA |
| view | Tenrec |
U-UUCC--------CAGAGGGGGACAACCAACUUCGAAAC-------GACAGCAC------------------------AGGGA-GGGAAGCCCA-GAAA--GCUUCU------------------------------------------------GAAGUGACCGAUGAGCUUUGCUUCCG--CUUUCC-CAGGUCCUGCUGG-CCCUGAUGGACAACAA-GGCCUAAGAU-UUCC--------CAGAGGGGGACAACCAACUUCGAAAC-------GACAGCAC------------------------AGGGA-GGGAAGCCCA-GAAA--GCUUCU------------------------------------------------GAAGUGACCGAUGAGCUUUGCUUCCG--CUUUCC-CAGGUCCUGCUGG-CCCUGAUGGACAACAA-GGCCUAAGAU-UUCC--------CAGAGGGGGACAACCAACUUCGAAAC-------GACAGCAC------------------------AGGGA-GGGAAGCCCA-GAAA--GCUUCU------------------------------------------------GAAGUGACCGAUGAGCUUUGCUUCCG--CUUUCC-CAGGUCCUGCUGG-CCCUGAUGGACAACAA-GGCCUAAGA |
| view | Opossum |
=======================================------GGGAUAGUAA------------------------AGGGA-AGGAGUCAAAUGGGAUCUCUUUG------------------------------------------------GAAUUAAC--AUGGACUUUGGUUGU---UUUAAA-CAGGUCCAGCUGG-UCCAGAUGGACACCAA-GGCCCAAGA=======================================------GGGAUAGUAA------------------------AGGGA-AGGAGUCAAAUGGGAUCUCUUUG------------------------------------------------GAAUUAAC--AUGGACUUUGGUUGU---UUUAAA-CAGGUCCAGCUGG-UCCAGAUGGACACCAA-GGCCCAAGA=======================================------GGGAUAGUAA------------------------AGGGA-AGGAGUCAAAUGGGAUCUCUUUG------------------------------------------------GAAUUAAC--AUGGACUUUGGUUGU---UUUAAA-CAGGUCCAGCUGG-UCCAGAUGGACACCAA-GGCCCAAGA |
| view | Platypus |
=======================================CCACUGGGUGCAAUCG------------------------AGGAA-GGAAGUCUGA--------CUUAA------------------------------------------------GGUACAUUCAACAGGCUCUUAUUCCA--UUUUAAACAGGUCCAGCUGG-UCCUGAUGGACAUCAA-GGUCCAAGA=======================================CCACUGGGUGCAAUCG------------------------AGGAA-GGAAGUCUGA--------CUUAA------------------------------------------------GGUACAUUCAACAGGCUCUUAUUCCA--UUUUAAACAGGUCCAGCUGG-UCCUGAUGGACAUCAA-GGUCCAAGA=======================================CCACUGGGUGCAAUCG------------------------AGGAA-GGAAGUCUGA--------CUUAA------------------------------------------------GGUACAUUCAACAGGCUCUUAUUCCA--UUUUAAACAGGUCCAGCUGG-UCCUGAUGGACAUCAA-GGUCCAAGA |
| view | Chicken |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Lizard |
==========================================================================================================================================================================ACUUUUCGAAUA--UUUGAA-CAGGUCCUCCUGG-ACCAGAUGGACACCAA-GGCCCCAGA==========================================================================================================================================================================ACUUUUCGAAUA--UUUGAA-CAGGUCCUCCUGG-ACCAGAUGGACACCAA-GGCCCCAGA==========================================================================================================================================================================ACUUUUCGAAUA--UUUGAA-CAGGUCCUCCUGG-ACCAGAUGGACACCAA-GGCCCCAGA |
| view | Frog |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Zebrafish |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Stickleback |
==========================================================================================================================================================================-----------------------GGUCCAGCCGG-CCCAGAGGGGCCACAA-GGACCUCAA==========================================================================================================================================================================-----------------------GGUCCAGCCGG-CCCAGAGGGGCCACAA-GGACCUCAA==========================================================================================================================================================================-----------------------GGUCCAGCCGG-CCCAGAGGGGCCACAA-GGACCUCAA |
| view | Tetradon |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Fugu |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Medaka |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
