Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
ACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCAC |
| view | Chimp |
ACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCAC |
| view | Rhesus |
ACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUCACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUCACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUC |
| view | Bushbaby |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Tree Shrew |
AGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--CAGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--CAGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--C |
| view | Horse |
=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU |
| view | Armadillo |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Cat |
AGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAUAGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAUAGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAU |
| view | Dog |
AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG===========AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG===========AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG=========== |
| view | Elephant |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Cow |
AGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCUAGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCUAGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCU |
| view | Rabbit |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Guinea Pig |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | HedgeHog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Mouse |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Rat |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Tenrec |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Opossum |
GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------===================================================================================GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------===================================================================================GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------=================================================================================== |
| view | Platypus |
AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------===========AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------===========AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------=========== |
| view | Chicken |
AGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------UAGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------UAGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------U |
| view | Lizard |
AGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------AAGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------AAGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------A |
| view | Frog |
========AUUGGAA-------CAGGCCCAGUGCU=============================================================================================================================================================================AUUGGAA-------CAGGCCCAGUGCU=============================================================================================================================================================================AUUGGAA-------CAGGCCCAGUGCU===================================================================================================================================================================== |
| view | Zebrafish |
=============================================================================================================================================================================================--GAAGAUGAA=============================================================================================================================================================================================--GAAGAUGAA=============================================================================================================================================================================================--GAAGAUGAA |
| view | Stickleback |
=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C |
| view | Tetradon |
=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA |
| view | Fugu |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Medaka |
UG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------AUG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------AUG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------A |