Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
ACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCAC |
view | Chimp |
ACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCACACAG--GGCUGGGGG-------CAGGCCCAGUGCUGGGGUCUUAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCA---CCACCAUGGCCAGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAU-GCCUCCAGGGAAGGGGCCAC |
view | Rhesus |
ACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUCACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUCACAG--GGCUGGGGG-------CAGGUCCAGUGCUGGGAUCUCAG-----GAG-------------GCAGCGCUCUCAGGAC-GUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCCUCACCC-------------------------UCCUCACUCAGGGCACAGGUGAC-ACCUCCAGGGAAGGGGCUUC |
view | Bushbaby |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tree Shrew |
AGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--CAGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--CAGA---GUCUAGGGGAG----CCAAGCUCUGUGCUGGGGUCUCAG-----CAG-------------GCCGUGCUC-AGGGGU-GUCU---GUACCGUGGCCUAGGCUCU--------GCUCC-CUUCAUCC-------------------------UCCUCUCUCAGGGUACAGGUGAC-ACCUCCAGGGAAGGGAC--C |
view | Horse |
=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU=====================================================================================================================ACUCCUGCUCACCU-------------------------GCUC--CUCCAAGCUCAGGUGAGAGUCACCACAGAAGGCACAGU |
view | Armadillo |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cat |
AGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAUAGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAUAGAG--GCAUGAGGGAG----CCAGGCCCAGGAUCAGAGUCUCAG-----AAG-------------GAAGUGCUCUUGAGGC-AUCU---CCACCAUGGCCUGGACUCU--------GAUCCUUCUCACCC-------------------------UCCUCACUCAGGACACAGGUGAG-GUCGCCAGGGAAGGGACCAU |
view | Dog |
AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG===========AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG===========AGAG--GCCUGGGAAGG----AAUGCGCCCAGCCUAGGCCCUCGG-----AGC-------------AAA------UCAGGGC-ACCU---CCACCAUGGCCUGGACCCU--------UCUUCUCCUUGGAU-------------------------UCCUGGCUCACUGCACAGGUGCU-GAGCCCAAG=========== |
view | Elephant |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cow |
AGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCUAGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCUAGGG--AUCUGAGGA------CCAGGCCCAGGGCUGCGGGCUCAG-----AAG-------------GCAGCGU--CUGGAGC-AUCU---CCACCAUGGUCUGGGCUCU--------GCUCCUCAUCACCG-------------------------UCCUCACUCAAGGCUCAGGUGAG-GCCUCCAGGGAAGGGACCCU |
view | Rabbit |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Guinea Pig |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | HedgeHog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Mouse |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Rat |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tenrec |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Opossum |
GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------===================================================================================GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------===================================================================================GGA----CCAGGAAGAGC---CCAGGCCCAGGCAUGAGCUCUUUG-----GGGA------------GCAGAGUUCUUGGGGC-CUCU---GCACCAUGGCCUGACCUCU--------=================================================================================== |
view | Platypus |
AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------===========AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------===========AGAG--AAUUGGGGGAU----CCCAGGCCAAAGCUGGGGCCUCGG-----GUA-------------GCAGAGCUCUUGUGUCUGUCU---CCAUCGUGGCACGCACUCC--------UCUCCUCCUCCUCC-------------------------ACCU-----------------------------=========== |
view | Chicken |
AGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------UAGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------UAGAACG--CUGCUGG-------CAG-ACCUAUCCUCCUGCUUUGAAGAGGCAU-------------GGAUGUCUGUGAGGCC-UCAUCUGCCAGGGUGGUG-----------------------------U-------------------------UCCUCAUCCCACCCCU-----------GCCAGG----------U |
view | Lizard |
AGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------AAGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------AAGAA----UCGGAAG-------CAGAACCCGUUUUCCUUUC---------CAC-------------GUAAAUCUCUUCAGGU-UUAU---CCAAGAUGGUGUGGAUCUC--------ACUCCUGGUAGCCU-------------------------UCCUCACUUAUCACCUAGGU----ACGACCAAG----------A |
view | Frog |
========AUUGGAA-------CAGGCCCAGUGCU=============================================================================================================================================================================AUUGGAA-------CAGGCCCAGUGCU=============================================================================================================================================================================AUUGGAA-------CAGGCCCAGUGCU===================================================================================================================================================================== |
view | Zebrafish |
=============================================================================================================================================================================================--GAAGAUGAA=============================================================================================================================================================================================--GAAGAUGAA=============================================================================================================================================================================================--GAAGAUGAA |
view | Stickleback |
=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C=================================================================================----------CAUCACAAACAUGACUCUGAUCUGCG-----UCCUCGUCUGGACUCUC-----------------CUCUGCUUCACAGGUAAAGU-----------------------C |
view | Tetradon |
=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA=================================================================================--------------------------CUCAUCACCA-----UCCUCAUCUGGACGCUGGCCUGC-----------UGCUGUUUCACAGGUUUGCU----------------------AA |
view | Fugu |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Medaka |
UG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------AUG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------AUG---------------UUGAUCAGUGGCUGUCCAGACCUUUCAG-----AGACACUGACACACCUGCAGCACAAUGAGGA----------UGUCAC-----UGACUCUG--CUGCU-----GGCUGUCCUGGAGCUCCUUGUUCAGGGUGAGACUCUCUGCUGGAAACUUGGAUU-----------------------A |