mir-638
chr19:10690060-10690199
View MI0003653 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human UGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAA
view Chimp UGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAA
view Rhesus UGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAA
view Bushbaby UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA-UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA-UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA-
view Tree Shrew ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Horse ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Armadillo ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Cat UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-
view Dog UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-
view Elephant ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Cow UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA-UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA-UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA-
view Rabbit ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Guinea Pig ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view HedgeHog UGGAGAACUUCGU----------GGGCCGGUGAGCG====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGAGCG====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGAGCG====================================================================================================================================================================================================================
view Mouse UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========
view Shrew ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Rat UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========
view Tenrec UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------=========UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------=========UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------=========
view Opossum UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA-UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA-UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA-
view Platypus ========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Chicken UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG----UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG----UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG----
view Lizard UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA----UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA----UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA----
view Frog UGGAGAACUUUGU----------AGGCCGGUAAGUG====================================================================================================================================================================================================================UGGAGAACUUUGU----------AGGCCGGUAAGUG====================================================================================================================================================================================================================UGGAGAACUUUGU----------AGGCCGGUAAGUG====================================================================================================================================================================================================================
view Zebrafish UGGAGAACUUCGU----------GGGCCGGUGA---====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGA---====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGA---====================================================================================================================================================================================================================
view Stickleback UGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGGUGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGGUGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGG
view Tetradon UGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAG
view Fugu UGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAG
view Medaka UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU=========UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU=========UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU=========

There are no comments yet

Leave a Comment


?
?

Powered by TalkBack