Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
UGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGUG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAA |
view | Chimp |
UGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUGAGCGGG------------------C---GCGGCAC-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCGUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGGCGGGGAA |
view | Rhesus |
UGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAAUGGAGAACUUCGU----------GGGCCGGUAAGCGGG------------------C---GCGGCAG-----------GG--AUCGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGUGCGGA---------------GGGCGGACC---GGGAAUGGCGCUCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCGGCGGCGGGGAA |
view | Bushbaby |
UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA-UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA-UAGAGAACUUUGU----------GGGACGUUAAGCGAG------------------C---GCAGCAG-----------GACUGUGGC-------------------GGCCGGCGACG------------GCGC--CUAA------------GGGCGCGAA---------------GAACGA--C---UGGGAUGGCGCGUCCUGCG-CACCGGCG-AACUGC-GCGCUUGCUUGCC-GCGACAGGAA- |
view | Tree Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Horse |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Armadillo |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cat |
UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------CGCGGCGGCGG-----------CG--GCGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA- |
view | Dog |
UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA-UCGAGAACUUCGU----------AGGCCGGUGAGCGAG------------------C---GCGGCGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGACC---GGGAAUGGCGCGCCCUGCGCAGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACGGGGA- |
view | Elephant |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cow |
UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA-UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA-UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---UCGGUGG-----------CG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------CGGCGCGGA---------------GGGCGGACU---GGGAAUGGCGCGCCCUGCGCCGCCGGCGUAACUGCGGCGCUUGCGUGCCCGCGACCGGGA- |
view | Rabbit |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Guinea Pig |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | HedgeHog |
UGGAGAACUUCGU----------GGGCCGGUGAGCG====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGAGCG====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGAGCG==================================================================================================================================================================================================================== |
view | Mouse |
UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCCGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---========= |
view | Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Rat |
UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---=========UCGAGAACUUCGU----------GGGCCGGUGAGCGAG------------------C---GCGCCGG-----------CG--GCGGUUCUGGGGCUCCGGCUGGGAGGGCG--GGCG------------GCGG--CCUA------------GGGCGCGGA---------------GGGCGGGCG---GGGAAUGGCGG------------------AACUGCGGCUCGCGGACGCC---========= |
view | Tenrec |
UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------=========UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------=========UCGAGAACUUCGU----------GGGCCGGUGAGCUGG------------------U---GCCGCGG-----------GG--ACGGC-------------------GGGCG--GGCG------------GCGG--CCUA------------GGGAGCGCA---------------GGGCGGUCC---GGGAAUGGCGCGCCCUGCGCUGCCGGCGUA----------------------========= |
view | Opossum |
UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA-UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA-UCGAGAACUUCGU----------AGGCCGGUGAGUCGG------------------C-GGGCUGCGC-----------CG--GCGGA-------------------AGAUG--GGCGCUCCCCCUCCCCGCGGGCCCUGCUCGCUCCGCCUGGGCGC------------------AGGCGGCUU---GAGGAAUGGGCCCUGGACGCGCCCGG-----CUGCGCCGCUUGCGUAA--GCAGCAGGCA- |
view | Platypus |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Chicken |
UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG----UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG----UGGAGAAUUUCGUCGGGAGGUACGGGGCGGGGAGGGGGGCGUGAGCGGAGCGGAGCU---GCGGGGGGUACCUUUUAUGG--GGGGC-------------------GCGGA--GAGC------------GCGG--C---------------GCGUGCGGC---------------AGGCGGGUUGUGUGGGGGGGAGCGCCGAGCGCGGCCGGGCU--CCUCCGUGCGUGCCCGUCGGUGCGCG---- |
view | Lizard |
UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA----UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA----UGGAGAACUUCGU----------GGGACGGUGAG----------------------U---GUGGGAG-----------GG--AGGGA-------------------AAAGG--GAGG------------CCGG--C---------------CGGUGCUGA---------------G---GAGUU-UGCGGAAAUGCCUGCCGAGAA-------------UUCCGCGCACGCGCGCCUGCGAACA---- |
view | Frog |
UGGAGAACUUUGU----------AGGCCGGUAAGUG====================================================================================================================================================================================================================UGGAGAACUUUGU----------AGGCCGGUAAGUG====================================================================================================================================================================================================================UGGAGAACUUUGU----------AGGCCGGUAAGUG==================================================================================================================================================================================================================== |
view | Zebrafish |
UGGAGAACUUCGU----------GGGCCGGUGA---====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGA---====================================================================================================================================================================================================================UGGAGAACUUCGU----------GGGCCGGUGA---==================================================================================================================================================================================================================== |
view | Stickleback |
UGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGGUGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGGUGGAGAACUUCGU----------CGGGAGGU-----============================================================================================================================================GUGAGACA---CGGAGACAGUUACUGUACAACAAGG----GGCUGGGGGACAGGUAUGUGGGAAACAAGGGG |
view | Tetradon |
UGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCG-----------CA--------------------------AAUAG--GAUA------------AUCC--CUUCUCCCGUUGACCUUGGCGAUGACGUAAGAGGCCUCUGGGCCAA--U---CUGUGCAGAGUUCAAACCACCUCAGCGGCUGUUGCUGCCCAC----------GAUGGGCAG |
view | Fugu |
UGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAGUGGAGAACUUUGU----------GGGCAGGUAA---------------------------ACCACCA-----------CA--------------------------AAUAG--GAUA------------AUCC--CCUCUCCCGUCGACCUUGGCGAUGACAUAAGAGGCCUACGGGCCGACCU---CUGUGCAGAGUUCAAACCACCUCGGCCGCUGUUGCUACCCAC----------GAUGAGAAG |
view | Medaka |
UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU=========UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU=========UGGAGAACUUCGU----------CGGGAGGUGA------------------------------GCCU-----------CG--------------------------CGGCG--GGAA------------ACGG--CUCCUCC-----------GCGCGGA----------------GAAAGUUU---CUGAGCGCGUGUGUGUCCCCU---------GCUGCUGCGCGCGCGUGUGUGU========= |