Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
G-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCAG-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCAG-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCA |
view | Chimp |
G-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCAG-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCAG-GAGCAUCAG-----------CUC-CUAGAGCCAGAGAGGAGCUGCC-------ACUUGGGC----ACUGAAACAAUGUCCAUUAGGCUUUGUUAUGGAAACUUCUCCUGAUCA---UUGUUUUGUGUCCAUUGAGCUUCCAAUUGUAAAAGGAUGGAGU-GCA |
view | Rhesus |
G-GAGCAUCAA-----------CUC-CUAGAACCAGAGAGGAGCCGCC-------ACUCGGGC----ACUGAAGCAAUGCCCAUUAGGCUUUGUUAUGGAAAUGUCUCCUGAUCA---UGGUUU-GUGUCCGUUGAGAUUCCAAUUGUAAAAGGCUGGAGU-GCAG-GAGCAUCAA-----------CUC-CUAGAACCAGAGAGGAGCCGCC-------ACUCGGGC----ACUGAAGCAAUGCCCAUUAGGCUUUGUUAUGGAAAUGUCUCCUGAUCA---UGGUUU-GUGUCCGUUGAGAUUCCAAUUGUAAAAGGCUGGAGU-GCAG-GAGCAUCAA-----------CUC-CUAGAACCAGAGAGGAGCCGCC-------ACUCGGGC----ACUGAAGCAAUGCCCAUUAGGCUUUGUUAUGGAAAUGUCUCCUGAUCA---UGGUUU-GUGUCCGUUGAGAUUCCAAUUGUAAAAGGCUGGAGU-GCA |
view | Bushbaby |
-----AGUCAA-----------CUC-CUCCAGCCAGAGGGGCGUGGCC-------ACUAGGGC----UCGGAAGCCACGCCCACCAGGCCUUGGCAUGU---UUUCUCCUGAUCA---UUAUUUCAUGUCAGCUGAGGUUCCAUUUAUAAAAGGACACAGG-GCA-----AGUCAA-----------CUC-CUCCAGCCAGAGGGGCGUGGCC-------ACUAGGGC----UCGGAAGCCACGCCCACCAGGCCUUGGCAUGU---UUUCUCCUGAUCA---UUAUUUCAUGUCAGCUGAGGUUCCAUUUAUAAAAGGACACAGG-GCA-----AGUCAA-----------CUC-CUCCAGCCAGAGGGGCGUGGCC-------ACUAGGGC----UCGGAAGCCACGCCCACCAGGCCUUGGCAUGU---UUUCUCCUGAUCA---UUAUUUCAUGUCAGCUGAGGUUCCAUUUAUAAAAGGACACAGG-GCA |
view | Tree Shrew |
G-GCGAGUCCG-----------CUC-CUGGGGUCAGAAAGGAGCAGCC-------GCU-GGGC----AUUGCCUUGGGACUCAUGAGGCCUUGGCAUGGGUGUCUCCCCUGAUCA---UUAUUCUAUGUCCAUCGAGAUUC-ACGUGUGAAAGGAUGGACU-GU-G-GCGAGUCCG-----------CUC-CUGGGGUCAGAAAGGAGCAGCC-------GCU-GGGC----AUUGCCUUGGGACUCAUGAGGCCUUGGCAUGGGUGUCUCCCCUGAUCA---UUAUUCUAUGUCCAUCGAGAUUC-ACGUGUGAAAGGAUGGACU-GU-G-GCGAGUCCG-----------CUC-CUGGGGUCAGAAAGGAGCAGCC-------GCU-GGGC----AUUGCCUUGGGACUCAUGAGGCCUUGGCAUGGGUGUCUCCCCUGAUCA---UUAUUCUAUGUCCAUCGAGAUUC-ACGUGUGAAAGGAUGGACU-GU- |
view | Horse |
===========-----------CUC-CUGGAGC-AGGGAGGAGUAGCC-------AUGUGGGU----AUUGCCUCCAUGCCCAUCAUGUCUUGGUGGAUAAUGUUUUCUUGACUG---UUAUUUUGUAUCAGUUGAGAUUCCAUUUGCAAGAGGAUGGAUG--CA===========-----------CUC-CUGGAGC-AGGGAGGAGUAGCC-------AUGUGGGU----AUUGCCUCCAUGCCCAUCAUGUCUUGGUGGAUAAUGUUUUCUUGACUG---UUAUUUUGUAUCAGUUGAGAUUCCAUUUGCAAGAGGAUGGAUG--CA===========-----------CUC-CUGGAGC-AGGGAGGAGUAGCC-------AUGUGGGU----AUUGCCUCCAUGCCCAUCAUGUCUUGGUGGAUAAUGUUUUCUUGACUG---UUAUUUUGUAUCAGUUGAGAUUCCAUUUGCAAGAGGAUGGAUG--CA |
view | Armadillo |
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view | Cat |
AAGAGAGUCAA-----------CCCGCUGGGGCCAGAGAGCAGCAGCC-------ACUUGGGC----UUUGCCUCAGAGCCCUUUAGGUCUUAGUAUAGAAUGUUUUCCUGA------UCCUUUCGUGUCCGUGGAAGUUCCAUCUGCAAAAGGAUGGGGGUGCAAAGAGAGUCAA-----------CCCGCUGGGGCCAGAGAGCAGCAGCC-------ACUUGGGC----UUUGCCUCAGAGCCCUUUAGGUCUUAGUAUAGAAUGUUUUCCUGA------UCCUUUCGUGUCCGUGGAAGUUCCAUCUGCAAAAGGAUGGGGGUGCAAAGAGAGUCAA-----------CCCGCUGGGGCCAGAGAGCAGCAGCC-------ACUUGGGC----UUUGCCUCAGAGCCCUUUAGGUCUUAGUAUAGAAUGUUUUCCUGA------UCCUUUCGUGUCCGUGGAAGUUCCAUCUGCAAAAGGAUGGGGGUGCA |
view | Dog |
A-GAGAGUCAA-----------CUC-CUGGAGCCAGA--------------------UCGGGC----CCUGCUUCAGAGCCCAUUAGGUCUUGGUAUAUGAUGUUUUCCUGACUGUUAUCUUAUAAUGUCAGUUGAAAUCUCAUUUGCAAAAGGAUGGAAG-GCAA-GAGAGUCAA-----------CUC-CUGGAGCCAGA--------------------UCGGGC----CCUGCUUCAGAGCCCAUUAGGUCUUGGUAUAUGAUGUUUUCCUGACUGUUAUCUUAUAAUGUCAGUUGAAAUCUCAUUUGCAAAAGGAUGGAAG-GCAA-GAGAGUCAA-----------CUC-CUGGAGCCAGA--------------------UCGGGC----CCUGCUUCAGAGCCCAUUAGGUCUUGGUAUAUGAUGUUUUCCUGACUGUUAUCUUAUAAUGUCAGUUGAAAUCUCAUUUGCAAAAGGAUGGAAG-GCA |
view | Elephant |
G-GAGAGCCAGCCGACCUGAGUCUC-CUGGAGCCAGAGAGAGCUAGCU-------GUUAGGUC----UUGCUUGCAGAGUUUUC----------------------UUCUGAUGA---UUGUUUUGUGUUGGUGG-GAUUCUGUUUGCAAAAGGCUGGAGC-GCAG-GAGAGCCAGCCGACCUGAGUCUC-CUGGAGCCAGAGAGAGCUAGCU-------GUUAGGUC----UUGCUUGCAGAGUUUUC----------------------UUCUGAUGA---UUGUUUUGUGUUGGUGG-GAUUCUGUUUGCAAAAGGCUGGAGC-GCAG-GAGAGCCAGCCGACCUGAGUCUC-CUGGAGCCAGAGAGAGCUAGCU-------GUUAGGUC----UUGCUUGCAGAGUUUUC----------------------UUCUGAUGA---UUGUUUUGUGUUGGUGG-GAUUCUGUUUGCAAAAGGCUGGAGC-GCA |
view | Cow |
GGGGGGCUCCC-----------CUC-CUGGAGGCAGAGAGAGGCAGCC-------GCUGGGGC----AC----------------AGGUCUUGGGGACCAGUGUUUUCUCGGUGC---UGAUUUCAUGCCAGGUG-GAUUACAUUUGCAAGAGGAUGGAGG-GGGGGGGGGCUCCC-----------CUC-CUGGAGGCAGAGAGAGGCAGCC-------GCUGGGGC----AC----------------AGGUCUUGGGGACCAGUGUUUUCUCGGUGC---UGAUUUCAUGCCAGGUG-GAUUACAUUUGCAAGAGGAUGGAGG-GGGGGGGGGCUCCC-----------CUC-CUGGAGGCAGAGAGAGGCAGCC-------GCUGGGGC----AC----------------AGGUCUUGGGGACCAGUGUUUUCUCGGUGC---UGAUUUCAUGCCAGGUG-GAUUACAUUUGCAAGAGGAUGGAGG-GGG |
view | Rabbit |
==========================================================================================================-----AUCA---CUGU-CUGUGUCACUUGAGAUUCCACUUGCGGAAGGCCAGAGU-GUG==========================================================================================================-----AUCA---CUGU-CUGUGUCACUUGAGAUUCCACUUGCGGAAGGCCAGAGU-GUG==========================================================================================================-----AUCA---CUGU-CUGUGUCACUUGAGAUUCCACUUGCGGAAGGCCAGAGU-GUG |
view | Guinea Pig |
G-CACAGCCGA-----------UUC-CUAGAGCCGGAGAGGGGCAGUCAGAGUGUCCACAGGCCUUGUCUGGAAUGUU----------CUUUGGUGA-----CCCCUGUUG-------------UAUAUCA-GUGCGAU-CCAUUUGUAAAAAGAUAGAGU-GCAG-CACAGCCGA-----------UUC-CUAGAGCCGGAGAGGGGCAGUCAGAGUGUCCACAGGCCUUGUCUGGAAUGUU----------CUUUGGUGA-----CCCCUGUUG-------------UAUAUCA-GUGCGAU-CCAUUUGUAAAAAGAUAGAGU-GCAG-CACAGCCGA-----------UUC-CUAGAGCCGGAGAGGGGCAGUCAGAGUGUCCACAGGCCUUGUCUGGAAUGUU----------CUUUGGUGA-----CCCCUGUUG-------------UAUAUCA-GUGCGAU-CCAUUUGUAAAAAGAUAGAGU-GCA |
view | HedgeHog |
==========================================================================================================UCCUGGUCC---UUGUUUUGUGAUGGCAGAGAUGCUCUGUGGAGGAGG--------GCA==========================================================================================================UCCUGGUCC---UUGUUUUGUGAUGGCAGAGAUGCUCUGUGGAGGAGG--------GCA==========================================================================================================UCCUGGUCC---UUGUUUUGUGAUGGCAGAGAUGCUCUGUGGAGGAGG--------GCA |
view | Mouse |
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view | Shrew |
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view | Rat |
G---------------------------GGGGAUAGAAAGGAGCGGUC-------CUGUGGGC----UCUGAGGUG----------------GGUGAAG---CUCCUCUU---------------------------------CGUGUGAACAGGAGGCGU-UCGG---------------------------GGGGAUAGAAAGGAGCGGUC-------CUGUGGGC----UCUGAGGUG----------------GGUGAAG---CUCCUCUU---------------------------------CGUGUGAACAGGAGGCGU-UCGG---------------------------GGGGAUAGAAAGGAGCGGUC-------CUGUGGGC----UCUGAGGUG----------------GGUGAAG---CUCCUCUU---------------------------------CGUGUGAACAGGAGGCGU-UCG |
view | Tenrec |
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view | Opossum |
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view | Platypus |
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view | Chicken |
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view | Lizard |
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view | Frog |
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view | Zebrafish |
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view | Stickleback |
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view | Tetradon |
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view | Fugu |
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view | Medaka |
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