Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
UUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUA---UUGUACUUUUAAACCACAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUA---UUGUACUUUUAAACCACAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUA---UUGUACUUUUAAACCACAUUA |
view | Chimp |
UUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUAUCGUUGUACUUUUAAACCACAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUAUCGUUGUACUUUUAAACCACAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAUUCUGGUCACAGAAUGACCUA--------------------------------GUAUUCUGUACCAGGGAAGGUAGUUCUUA--ACUAUAUCGUUGUACUUUUAAACCACAUUA |
view | Rhesus |
UUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUA------------------UAUC-A-UA---UUUUGUUAUUCUGGUCUCAGAAUGAC--A--------------------------------GUAUUCUGUGCCAGGGAAGGUAGUUCUUA--ACUAUAUUGUUGUACUUUUAAACCGCAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUA------------------UAUC-A-UA---UUUUGUUAUUCUGGUCUCAGAAUGAC--A--------------------------------GUAUUCUGUGCCAGGGAAGGUAGUUCUUA--ACUAUAUUGUUGUACUUUUAAACCGCAUUAUUCA--------------------------------U-UUCCUUCUACC-----------------------UGA--AACU----UAACAUCAUAC---------------------UACCUCUUUA------------------UAUC-A-UA---UUUUGUUAUUCUGGUCUCAGAAUGAC--A--------------------------------GUAUUCUGUGCCAGGGAAGGUAGUUCUUA--ACUAUAUUGUUGUACUUUUAAACCGCAUUA |
view | Bushbaby |
CCCA--------------------------------G-UUUCUUCUAUC-----------------------UGG--GACUCAGACAACAUUAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUCUUAACUUGGUCUCAGAAGGACCUA--------------------------------AUAUUCAUUACCGGAAAAGGUGGCUUGUU--ACCAUAU---UGUACUUUUAAACCACAUCACCCA--------------------------------G-UUUCUUCUAUC-----------------------UGG--GACUCAGACAACAUUAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUCUUAACUUGGUCUCAGAAGGACCUA--------------------------------AUAUUCAUUACCGGAAAAGGUGGCUUGUU--ACCAUAU---UGUACUUUUAAACCACAUCACCCA--------------------------------G-UUUCUUCUAUC-----------------------UGG--GACUCAGACAACAUUAUAC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUCUUAACUUGGUCUCAGAAGGACCUA--------------------------------AUAUUCAUUACCGGAAAAGGUGGCUUGUU--ACCAUAU---UGUACUUUUAAACCACAUCA |
view | Tree Shrew |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Horse |
UUCA---------------------------------AUUUCUUCUAUCUGGGACUCAAACUCUCUCCUAUAUGA--GACUCAGUCAACAUCGUAC---------------------UACCUCUUCG------------------UGUC-A-UG---UUUUCUUUUUCUGGUCUUAGAAUGACCUC--------------------------------GCAUUGAGUACCAAGAAAGGUGGUUCUUA--ACUA------UGUACUUUUAUACCAUAUCAUUCA---------------------------------AUUUCUUCUAUCUGGGACUCAAACUCUCUCCUAUAUGA--GACUCAGUCAACAUCGUAC---------------------UACCUCUUCG------------------UGUC-A-UG---UUUUCUUUUUCUGGUCUUAGAAUGACCUC--------------------------------GCAUUGAGUACCAAGAAAGGUGGUUCUUA--ACUA------UGUACUUUUAUACCAUAUCAUUCA---------------------------------AUUUCUUCUAUCUGGGACUCAAACUCUCUCCUAUAUGA--GACUCAGUCAACAUCGUAC---------------------UACCUCUUCG------------------UGUC-A-UG---UUUUCUUUUUCUGGUCUUAGAAUGACCUC--------------------------------GCAUUGAGUACCAAGAAAGGUGGUUCUUA--ACUA------UGUACUUUUAUACCAUAUCA |
view | Armadillo |
UACA-------------------------ACUA--------CUUAUAUC-----------------------UGG--GACACGAGGAAUAUUGCAC---------------------UACCUCUUUG------------------UAUCCA-UA---UUUUCUUACUCUGAUCUCAGAAUGACCUA--------------------------------GAAUUCAAAACCAGGGAAGUUGAUUCUUA--AUUAUAGUUUUGGGCUUUCAAACGGCAUAAUACA-------------------------ACUA--------CUUAUAUC-----------------------UGG--GACACGAGGAAUAUUGCAC---------------------UACCUCUUUG------------------UAUCCA-UA---UUUUCUUACUCUGAUCUCAGAAUGACCUA--------------------------------GAAUUCAAAACCAGGGAAGUUGAUUCUUA--AUUAUAGUUUUGGGCUUUCAAACGGCAUAAUACA-------------------------ACUA--------CUUAUAUC-----------------------UGG--GACACGAGGAAUAUUGCAC---------------------UACCUCUUUG------------------UAUCCA-UA---UUUUCUUACUCUGAUCUCAGAAUGACCUA--------------------------------GAAUUCAAAACCAGGGAAGUUGAUUCUUA--AUUAUAGUUUUGGGCUUUCAAACGGCAUAA |
view | Cat |
UUCA---------------------------------AUUUCUUCUGUC-----------------------------ACUCAGUCAACAUUGUAC---------------------UACCUCCUUG-------------------------------UUUAUUAGUUUGGUCUCAGUAUGACCUA--------------------------------GCAUUCAGUACCAGGAAAGGUGGUUCUUA--ACUA------UGUGCUUUUAAACUGCAUAAUUCA---------------------------------AUUUCUUCUGUC-----------------------------ACUCAGUCAACAUUGUAC---------------------UACCUCCUUG-------------------------------UUUAUUAGUUUGGUCUCAGUAUGACCUA--------------------------------GCAUUCAGUACCAGGAAAGGUGGUUCUUA--ACUA------UGUGCUUUUAAACUGCAUAAUUCA---------------------------------AUUUCUUCUGUC-----------------------------ACUCAGUCAACAUUGUAC---------------------UACCUCCUUG-------------------------------UUUAUUAGUUUGGUCUCAGUAUGACCUA--------------------------------GCAUUCAGUACCAGGAAAGGUGGUUCUUA--ACUA------UGUGCUUUUAAACUGCAUAA |
view | Dog |
====================================-GUUUCUUCUAUC-----------------------UGA--GGCUCAAUCAAUAUUGUAC---------------------UACCUCUUUG-------------------------------UAUAUUAAUUGGAUCUCAGAAUGACCUA--------------------------------GCAUUCAGUACUCUGAAAGGUGGAUCUUA--ACUA------UGUGCUUUCAAACCACAUAA====================================-GUUUCUUCUAUC-----------------------UGA--GGCUCAAUCAAUAUUGUAC---------------------UACCUCUUUG-------------------------------UAUAUUAAUUGGAUCUCAGAAUGACCUA--------------------------------GCAUUCAGUACUCUGAAAGGUGGAUCUUA--ACUA------UGUGCUUUCAAACCACAUAA====================================-GUUUCUUCUAUC-----------------------UGA--GGCUCAAUCAAUAUUGUAC---------------------UACCUCUUUG-------------------------------UAUAUUAAUUGGAUCUCAGAAUGACCUA--------------------------------GCAUUCAGUACUCUGAAAGGUGGAUCUUA--ACUA------UGUGCUUUCAAACCACAUAA |
view | Elephant |
AACAGUUUCUUUCA---------UCAGGUACUGGAA-UUUUCUUGUAUC-----------------------UGA--GACUCGAACGGUAUCACAC---------------------UCUCUCUUUA------------------UAUCCA-UA---U--------UCUGGUCUCAGAAUGACCUA--------------------------------GAAUUCAGUACCAGAAAAGGUGGUUCUUA--ACUAUGGUUUCGUGCUUUUAAAAUACAUCAAACAGUUUCUUUCA---------UCAGGUACUGGAA-UUUUCUUGUAUC-----------------------UGA--GACUCGAACGGUAUCACAC---------------------UCUCUCUUUA------------------UAUCCA-UA---U--------UCUGGUCUCAGAAUGACCUA--------------------------------GAAUUCAGUACCAGAAAAGGUGGUUCUUA--ACUAUGGUUUCGUGCUUUUAAAAUACAUCAAACAGUUUCUUUCA---------UCAGGUACUGGAA-UUUUCUUGUAUC-----------------------UGA--GACUCGAACGGUAUCACAC---------------------UCUCUCUUUA------------------UAUCCA-UA---U--------UCUGGUCUCAGAAUGACCUA--------------------------------GAAUUCAGUACCAGAAAAGGUGGUUCUUA--ACUAUGGUUUCGUGCUUUUAAAAUACAUCA |
view | Cow |
CUCA---------------------------------GUUUCUCCUAUC--GAACUUAAGCUUUAUUCUUUCUGA--G-------CAGCAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAAUCUGGUUUCAGAAUGACGUG--------------------------------GCAUUUGAUAC---GAAAGGUGGUUCUUA--UCUAAU----UGUACU----GAACCUAUCACUCA---------------------------------GUUUCUCCUAUC--GAACUUAAGCUUUAUUCUUUCUGA--G-------CAGCAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAAUCUGGUUUCAGAAUGACGUG--------------------------------GCAUUUGAUAC---GAAAGGUGGUUCUUA--UCUAAU----UGUACU----GAACCUAUCACUCA---------------------------------GUUUCUCCUAUC--GAACUUAAGCUUUAUUCUUUCUGA--G-------CAGCAUCAUGC---------------------UACCUCUUUG------------------UAUC-A-UA---UUUUGUUAAUCUGGUUUCAGAAUGACGUG--------------------------------GCAUUUGAUAC---GAAAGGUGGUUCUUA--UCUAAU----UGUACU----GAACCUAUCA |
view | Rabbit |
CACA--------------------------------G-CUGCUUC--UC-----------------------UGG--AACUCAGUCAACAUCGCAC---------------------UAC--CUCUG------------------CAUC-A-UGCUUUCUUCUUCCUCUGGUGUCAGAACGACCUA--------------------------------GCUUUCAGGACCAGGAAGGGCUGUUCAUG-C-CUAGUU---UGUACUUUGAGACCACAUCCCACA--------------------------------G-CUGCUUC--UC-----------------------UGG--AACUCAGUCAACAUCGCAC---------------------UAC--CUCUG------------------CAUC-A-UGCUUUCUUCUUCCUCUGGUGUCAGAACGACCUA--------------------------------GCUUUCAGGACCAGGAAGGGCUGUUCAUG-C-CUAGUU---UGUACUUUGAGACCACAUCCCACA--------------------------------G-CUGCUUC--UC-----------------------UGG--AACUCAGUCAACAUCGCAC---------------------UAC--CUCUG------------------CAUC-A-UGCUUUCUUCUUCCUCUGGUGUCAGAACGACCUA--------------------------------GCUUUCAGGACCAGGAAGGGCUGUUCAUG-C-CUAGUU---UGUACUUUGAGACCACAUCC |
view | Guinea Pig |
UGCA--------------------------------G-UUUCUUAUGUC-----------------------UGG--GCGUGGU-CAGCCUUGGAC---------------------UGCAUCUUUG------------------UAUC-A-UG-----UUUUCAUUGUAGUCACCCAAUGACGUA--------------------------------GCAUGCAGGACUGGGGACGAUGGUCCUUAA-----------====================UGCA--------------------------------G-UUUCUUAUGUC-----------------------UGG--GCGUGGU-CAGCCUUGGAC---------------------UGCAUCUUUG------------------UAUC-A-UG-----UUUUCAUUGUAGUCACCCAAUGACGUA--------------------------------GCAUGCAGGACUGGGGACGAUGGUCCUUAA-----------====================UGCA--------------------------------G-UUUCUUAUGUC-----------------------UGG--GCGUGGU-CAGCCUUGGAC---------------------UGCAUCUUUG------------------UAUC-A-UG-----UUUUCAUUGUAGUCACCCAAUGACGUA--------------------------------GCAUGCAGGACUGGGGACGAUGGUCCUUAA-----------==================== |
view | HedgeHog |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Mouse |
CACA--------------------------------A-UGUCUUCUAUC-----------------------UGA--GACCAGAGUGAUAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGACGUA--------------------------------GCAUCCAGAACCAGAAGAAGUGGCUUUUU------------CAUUCUUUGUCAACU-----CACA--------------------------------A-UGUCUUCUAUC-----------------------UGA--GACCAGAGUGAUAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGACGUA--------------------------------GCAUCCAGAACCAGAAGAAGUGGCUUUUU------------CAUUCUUUGUCAACU-----CACA--------------------------------A-UGUCUUCUAUC-----------------------UGA--GACCAGAGUGAUAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGACGUA--------------------------------GCAUCCAGAACCAGAAGAAGUGGCUUUUU------------CAUUCUUUGUCAACU----- |
view | Shrew |
UUCA----------------------------------UUACUUUUAUAUGGGAUUUAAACUUC--------UGA--AACUCUACCAACAUAGUAC---------------------UACCUCUUUG------------------UAUU-AGUA---UUUUCUUAAUCUGGUCUCAGAAUGACCUA--------------------------------GCAUUUA-UACCAGGAGAGGUGGCUCUUA--GAAA------UAUACU-UCAAACCACAUCAUUCA----------------------------------UUACUUUUAUAUGGGAUUUAAACUUC--------UGA--AACUCUACCAACAUAGUAC---------------------UACCUCUUUG------------------UAUU-AGUA---UUUUCUUAAUCUGGUCUCAGAAUGACCUA--------------------------------GCAUUUA-UACCAGGAGAGGUGGCUCUUA--GAAA------UAUACU-UCAAACCACAUCAUUCA----------------------------------UUACUUUUAUAUGGGAUUUAAACUUC--------UGA--AACUCUACCAACAUAGUAC---------------------UACCUCUUUG------------------UAUU-AGUA---UUUUCUUAAUCUGGUCUCAGAAUGACCUA--------------------------------GCAUUUA-UACCAGGAGAGGUGGCUCUUA--GAAA------UAUACU-UCAAACCACAUCA |
view | Rat |
CACA--------------------------------AUUUUCCUCUAUU-----------------------UGG--GACCAGA--GACAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGAUGUA--------------------------------GCAUCCAGAAUCGGAAGAAGUGGCUUUCC------------CAUACUUUGACAACA-----CACA--------------------------------AUUUUCCUCUAUU-----------------------UGG--GACCAGA--GACAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGAUGUA--------------------------------GCAUCCAGAAUCGGAAGAAGUGGCUUUCC------------CAUACUUUGACAACA-----CACA--------------------------------AUUUUCCUCUAUU-----------------------UGG--GACCAGA--GACAUCCAAC---------------------UAC--CUCUG------------------UACA-G-UU-----UUCUUAUUCUGGUCUCAGAAUGAUGUA--------------------------------GCAUCCAGAAUCGGAAGAAGUGGCUUUCC------------CAUACUUUGACAACA----- |
view | Tenrec |
GACUCACUCACUCACUGACUCACUCACUCACUGUCU-CACUCUCUCA-C-----------------------UGACUCACUCUCACUGUCUCACUCACACACAUACACACACAAAAGGCUCAAUUUAAUUUACCCAAGAUUACAGUGUCUG-UA---G--------CUUGGACUCAAUAUAUCUUACUGCUUGAUGCGUCCAUGUCUCCUCAUAUUUGGAUUUUGAUACCAGAAAA---GGUCCUUA--ACUAUGGUUUUGUGCUUUUAAAGUGCUUCAGACUCACUCACUCACUGACUCACUCACUCACUGUCU-CACUCUCUCA-C-----------------------UGACUCACUCUCACUGUCUCACUCACACACAUACACACACAAAAGGCUCAAUUUAAUUUACCCAAGAUUACAGUGUCUG-UA---G--------CUUGGACUCAAUAUAUCUUACUGCUUGAUGCGUCCAUGUCUCCUCAUAUUUGGAUUUUGAUACCAGAAAA---GGUCCUUA--ACUAUGGUUUUGUGCUUUUAAAGUGCUUCAGACUCACUCACUCACUGACUCACUCACUCACUGUCU-CACUCUCUCA-C-----------------------UGACUCACUCUCACUGUCUCACUCACACACAUACACACACAAAAGGCUCAAUUUAAUUUACCCAAGAUUACAGUGUCUG-UA---G--------CUUGGACUCAAUAUAUCUUACUGCUUGAUGCGUCCAUGUCUCCUCAUAUUUGGAUUUUGAUACCAGAAAA---GGUCCUUA--ACUAUGGUUUUGUGCUUUUAAAGUGCUUCA |
view | Opossum |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Platypus |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Chicken |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Lizard |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Frog |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Zebrafish |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Stickleback |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tetradon |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Fugu |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Medaka |
===================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |