Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
GACACAUGU--------CUGUCAGACUGUACA----CAGUAGAAGCAUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAAUGACACAUGU--------CUGUCAGACUGUACA----CAGUAGAAGCAUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAAUGACACAUGU--------CUGUCAGACUGUACA----CAGUAGAAGCAUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAAU |
view | Chimp |
GACACAUGU--------CUGUCAGAUUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAGUGACACAUGU--------CUGUCAGAUUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAGUGACACAUGU--------CUGUCAGAUUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGUUGGGUUGCAUCCUAAGCU--GUGCUGGAGCUUCCCGAU-------G---UACUCUGUAGAUGUCUUUGCA--------CCU--UCUGUCCUCAUUGCCA------UCCCCAGU |
view | Rhesus |
GACACAUG----------UGUCGGACUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGCUGGGUUGCAUCCUAAGCU--GGGCUGGAGCUUCCUGAU-------G---UGCUCUGUAGAUGUCUUUGCA--------CCU--CCUGUACUCACUGCCA----------CAGUGACACAUG----------UGUCGGACUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGCUGGGUUGCAUCCUAAGCU--GGGCUGGAGCUUCCUGAU-------G---UGCUCUGUAGAUGUCUUUGCA--------CCU--CCUGUACUCACUGCCA----------CAGUGACACAUG----------UGUCGGACUGUACA----CAGUAGAAGCGUCCC----------UU-------GCAG--------GGGCUGCUGGGUUGCAUCCUAAGCU--GGGCUGGAGCUUCCUGAU-------G---UGCUCUGUAGAUGUCUUUGCA--------CCU--CCUGUACUCACUGCCA----------CAGU |
view | Bushbaby |
========================================================================================================================UCCUGAU-------A---GACACUGUGGAUGCCUUUUUA--------CCC-GCCUCUCCUCACUGCCA-------CCUCAGU========================================================================================================================UCCUGAU-------A---GACACUGUGGAUGCCUUUUUA--------CCC-GCCUCUCCUCACUGCCA-------CCUCAGU========================================================================================================================UCCUGAU-------A---GACACUGUGGAUGCCUUUUUA--------CCC-GCCUCUCCUCACUGCCA-------CCUCAGU |
view | Tree Shrew |
GACACAGGU--------CUGUC----------------GUCGAC------------------------------------------------GUUAUGUCCCAGGCU--AAGGCAUAGCUUUCCGAA-------A---GGCCACCUAGCUGCCUCUGCA--------GC---CCUCUCCUCACUGCGA-------GCCUGCUGACACAGGU--------CUGUC----------------GUCGAC------------------------------------------------GUUAUGUCCCAGGCU--AAGGCAUAGCUUUCCGAA-------A---GGCCACCUAGCUGCCUCUGCA--------GC---CCUCUCCUCACUGCGA-------GCCUGCUGACACAGGU--------CUGUC----------------GUCGAC------------------------------------------------GUUAUGUCCCAGGCU--AAGGCAUAGCUUUCCGAA-------A---GGCCACCUAGCUGCCUCUGCA--------GC---CCUCUCCUCACUGCGA-------GCCUGCU |
view | Horse |
GACACACAU--------CCAUUGGCUUGCACAC---CGGUUGAAGUAUUCC----------UUGCGGGGAGCAGCAGUAGCCAAGCUGUUGAGUUGUAUCCUAGGCU--GUCGCACAAUUUUCUGAU-------AAUAGACUCUCUAGAUGCCCUCUCA----------C--CCUCCUCUUGCUACCA------CCCCAGUUGACACACAU--------CCAUUGGCUUGCACAC---CGGUUGAAGUAUUCC----------UUGCGGGGAGCAGCAGUAGCCAAGCUGUUGAGUUGUAUCCUAGGCU--GUCGCACAAUUUUCUGAU-------AAUAGACUCUCUAGAUGCCCUCUCA----------C--CCUCCUCUUGCUACCA------CCCCAGUUGACACACAU--------CCAUUGGCUUGCACAC---CGGUUGAAGUAUUCC----------UUGCGGGGAGCAGCAGUAGCCAAGCUGUUGAGUUGUAUCCUAGGCU--GUCGCACAAUUUUCUGAU-------AAUAGACUCUCUAGAUGCCCUCUCA----------C--CCUCCUCUUGCUACCA------CCCCAGUU |
view | Armadillo |
--GUCACGU--------CUGUUGGCAUGCGCAC---UGGUGGAAAUGUUUC----------UU-------GCAG---UAGCCAAGCUGUUGUGCUGCAUCCUAGCCU--AU----UAGAUACCUCGU-------A--GGAUUCCUUAGGUGCCUCCUCA--------CUU-CCCUCUCUUGGCUGCUA-----UGCCCAACU--GUCACGU--------CUGUUGGCAUGCGCAC---UGGUGGAAAUGUUUC----------UU-------GCAG---UAGCCAAGCUGUUGUGCUGCAUCCUAGCCU--AU----UAGAUACCUCGU-------A--GGAUUCCUUAGGUGCCUCCUCA--------CUU-CCCUCUCUUGGCUGCUA-----UGCCCAACU--GUCACGU--------CUGUUGGCAUGCGCAC---UGGUGGAAAUGUUUC----------UU-------GCAG---UAGCCAAGCUGUUGUGCUGCAUCCUAGCCU--AU----UAGAUACCUCGU-------A--GGAUUCCUUAGGUGCCUCCUCA--------CUU-CCCUCUCUUGGCUGCUA-----UGCCCAACU |
view | Cat |
GGCGCAUGUCUGGUGGCUCCGCGGCUCGUGCCC---CAGGGACGUUGCUCC----------UU-------GCAGCC------------------------------------------CUUCCUGAU-------GGCAGCCCCUCC------CCUCACUGGGGAAGUGCC--CUUCCCCUCACUGACA--------------GGCGCAUGUCUGGUGGCUCCGCGGCUCGUGCCC---CAGGGACGUUGCUCC----------UU-------GCAGCC------------------------------------------CUUCCUGAU-------GGCAGCCCCUCC------CCUCACUGGGGAAGUGCC--CUUCCCCUCACUGACA--------------GGCGCAUGUCUGGUGGCUCCGCGGCUCGUGCCC---CAGGGACGUUGCUCC----------UU-------GCAGCC------------------------------------------CUUCCUGAU-------GGCAGCCCCUCC------CCUCACUGGGGAAGUGCC--CUUCCCCUCACUGACA-------------- |
view | Dog |
GGCCCCU----------CCCUUGGCUUGUGCCC---CAGUUUUAGUGUUCC----------UU-------GCCGCUGUAGCCCAGCCGUUGGGCUGCGUCCUAGGCU--GUCACAAAGCUUCCUGAU-------GGCAGACUCUCCAGG---UCUCUCU------GUGCC--CCUCCCCUCACCGACA------CCGCAGUUGGCCCCU----------CCCUUGGCUUGUGCCC---CAGUUUUAGUGUUCC----------UU-------GCCGCUGUAGCCCAGCCGUUGGGCUGCGUCCUAGGCU--GUCACAAAGCUUCCUGAU-------GGCAGACUCUCCAGG---UCUCUCU------GUGCC--CCUCCCCUCACCGACA------CCGCAGUUGGCCCCU----------CCCUUGGCUUGUGCCC---CAGUUUUAGUGUUCC----------UU-------GCCGCUGUAGCCCAGCCGUUGGGCUGCGUCCUAGGCU--GUCACAAAGCUUCCUGAU-------GGCAGACUCUCCAGG---UCUCUCU------GUGCC--CCUCCCCUCACCGACA------CCGCAGUU |
view | Elephant |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cow |
GACGCACGU--------CGGGUGGUGAGCAUAC---CAGCCGGAGCGCCCC----------UU-------GCAG-------------GGAGCGCAGUGGCCUGUGCU--GCGACAUUGCUUCCUAAU-------UGUGGA--CUCCGGGCGCCUCCUCA---------CC--CAACUCCUCACUGCCU------CCCCAGUCGACGCACGU--------CGGGUGGUGAGCAUAC---CAGCCGGAGCGCCCC----------UU-------GCAG-------------GGAGCGCAGUGGCCUGUGCU--GCGACAUUGCUUCCUAAU-------UGUGGA--CUCCGGGCGCCUCCUCA---------CC--CAACUCCUCACUGCCU------CCCCAGUCGACGCACGU--------CGGGUGGUGAGCAUAC---CAGCCGGAGCGCCCC----------UU-------GCAG-------------GGAGCGCAGUGGCCUGUGCU--GCGACAUUGCUUCCUAAU-------UGUGGA--CUCCGGGCGCCUCCUCA---------CC--CAACUCCUCACUGCCU------CCCCAGUC |
view | Rabbit |
GACAGAAGUCC------CU-----------------UCACUCGCACACCAG----------UG-------GAAA--------CGCACACCUCGUGCUGUCCCGGGCU-------GUGGCU-------------------------------------UA--------CCU------UCCUCG--------------------GACAGAAGUCC------CU-----------------UCACUCGCACACCAG----------UG-------GAAA--------CGCACACCUCGUGCUGUCCCGGGCU-------GUGGCU-------------------------------------UA--------CCU------UCCUCG--------------------GACAGAAGUCC------CU-----------------UCACUCGCACACCAG----------UG-------GAAA--------CGCACACCUCGUGCUGUCCCGGGCU-------GUGGCU-------------------------------------UA--------CCU------UCCUCG-------------------- |
view | Guinea Pig |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | HedgeHog |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Mouse |
GACCUGGGUAC------CUGUCUACAGGUGCAGUGCUGGUUAACGAGUCCU----------UG-------GCAA--------GGGCUGCCGAGCUCCAUUCUGCACUCUAUAACAUAGCUUCCCCAU-------A----------------CCUCUGUA--------CCC------UCCUCGGUGUACUCUUGUUCCUAGUUGACCUGGGUAC------CUGUCUACAGGUGCAGUGCUGGUUAACGAGUCCU----------UG-------GCAA--------GGGCUGCCGAGCUCCAUUCUGCACUCUAUAACAUAGCUUCCCCAU-------A----------------CCUCUGUA--------CCC------UCCUCGGUGUACUCUUGUUCCUAGUUGACCUGGGUAC------CUGUCUACAGGUGCAGUGCUGGUUAACGAGUCCU----------UG-------GCAA--------GGGCUGCCGAGCUCCAUUCUGCACUCUAUAACAUAGCUUCCCCAU-------A----------------CCUCUGUA--------CCC------UCCUCGGUGUACUCUUGUUCCUAGUU |
view | Shrew |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Rat |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tenrec |
GAGACACAC--------UGACUGGCUCGCACAG---CAGUUGAGAUGGUUCUAGUGGGAAGUA-------GCAG---UAACCACACAGCUGGGUUGCAUCUUAGCCU--AUUCUGUAGCUUCCUGGUUCCCUUAA--GGUCUCUGUAGGUGCAUCCUUA--------CCUACUCUUUCUUUACCGCCA-----UCCCCAUUUGAGACACAC--------UGACUGGCUCGCACAG---CAGUUGAGAUGGUUCUAGUGGGAAGUA-------GCAG---UAACCACACAGCUGGGUUGCAUCUUAGCCU--AUUCUGUAGCUUCCUGGUUCCCUUAA--GGUCUCUGUAGGUGCAUCCUUA--------CCUACUCUUUCUUUACCGCCA-----UCCCCAUUUGAGACACAC--------UGACUGGCUCGCACAG---CAGUUGAGAUGGUUCUAGUGGGAAGUA-------GCAG---UAACCACACAGCUGGGUUGCAUCUUAGCCU--AUUCUGUAGCUUCCUGGUUCCCUUAA--GGUCUCUGUAGGUGCAUCCUUA--------CCUACUCUUUCUUUACCGCCA-----UCCCCAUUU |
view | Opossum |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Platypus |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Chicken |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Lizard |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Frog |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Zebrafish |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Stickleback |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tetradon |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Fugu |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Medaka |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |