Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC--------AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC--------AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC-------- |
| view | Chimp |
AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-U--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC--------AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-U--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC--------AAC------UUCCCU----UC----UUGG---GCUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-U--GGU-GCUGCUGUGC----UCUGA---UGAAG---ACC---C-AUGUGGCUAGCAACAGCGCUUACC----UUUUG-UCUCUGGGUCCUGGCC-------------------------------------------U--GGGGCCAUCAAUCC-------- |
| view | Rhesus |
AAC------UUCCCC----UC----UUGG---ACUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--AGU-GCCGCUGUGC----UUUGA---UGAAG---ACC---C-ACGUGGCUGGCAACAGCUCUUACC----UUUUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCU--GGGUGU-UCUGUUGGCUCAUUU--GGGGCCAUCAGUCC--------AAC------UUCCCC----UC----UUGG---ACUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--AGU-GCCGCUGUGC----UUUGA---UGAAG---ACC---C-ACGUGGCUGGCAACAGCUCUUACC----UUUUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCU--GGGUGU-UCUGUUGGCUCAUUU--GGGGCCAUCAGUCC--------AAC------UUCCCC----UC----UUGG---ACUUU----AGAUUGAGGAAGGGGCU----GAGUGGUAGG-C--AGU-GCCGCUGUGC----UUUGA---UGAAG---ACC---C-ACGUGGCUGGCAACAGCUCUUACC----UUUUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCU--GGGUGU-UCUGUUGGCUCAUUU--GGGGCCAUCAGUCC-------- |
| view | Bushbaby |
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| view | Tree Shrew |
AGC------UGCCUU----CCACUGCUGG---CCUUU----AGGAUGAGGAAGGGGCU----GAG-----GG-C--UGU-GCUGCCGUGU----CUUGA---GGAAG---ACC---U-AUGUAGGUGACCUCAGCUCUUAAC----UUCUG-UCUCUGGAGCCUGGCCUGG------GUAGGACUUCA--GAGUG--UCUAUUGGUCCAUCU--GGGGCUGUCAGUCC--------AGC------UGCCUU----CCACUGCUGG---CCUUU----AGGAUGAGGAAGGGGCU----GAG-----GG-C--UGU-GCUGCCGUGU----CUUGA---GGAAG---ACC---U-AUGUAGGUGACCUCAGCUCUUAAC----UUCUG-UCUCUGGAGCCUGGCCUGG------GUAGGACUUCA--GAGUG--UCUAUUGGUCCAUCU--GGGGCUGUCAGUCC--------AGC------UGCCUU----CCACUGCUGG---CCUUU----AGGAUGAGGAAGGGGCU----GAG-----GG-C--UGU-GCUGCCGUGU----CUUGA---GGAAG---ACC---U-AUGUAGGUGACCUCAGCUCUUAAC----UUCUG-UCUCUGGAGCCUGGCCUGG------GUAGGACUUCA--GAGUG--UCUAUUGGUCCAUCU--GGGGCUGUCAGUCC-------- |
| view | Horse |
AGC------UUCCUG----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAAGGGAGGG-GGCUGU-GCUGCUGUGC----UUUG----UGAAGUCAGCU---U---GUGGCUGACAACAGCCCUUAGC----UCCUG---UCUUGCUCCUGGUCUGG------GUGGGAUUCCA--GAGUAU-UGUGUUGGACCAUCUAAUGGGCUGUUGAUCU--------AGC------UUCCUG----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAAGGGAGGG-GGCUGU-GCUGCUGUGC----UUUG----UGAAGUCAGCU---U---GUGGCUGACAACAGCCCUUAGC----UCCUG---UCUUGCUCCUGGUCUGG------GUGGGAUUCCA--GAGUAU-UGUGUUGGACCAUCUAAUGGGCUGUUGAUCU--------AGC------UUCCUG----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAAGGGAGGG-GGCUGU-GCUGCUGUGC----UUUG----UGAAGUCAGCU---U---GUGGCUGACAACAGCCCUUAGC----UCCUG---UCUUGCUCCUGGUCUGG------GUGGGAUUCCA--GAGUAU-UGUGUUGGACCAUCUAAUGGGCUGUUGAUCU-------- |
| view | Armadillo |
CUC------UUCCCU----CUCCAGAAGA---ACUUCUCCUCUGCUGAGGAAGGGCUG----GAGGGGA-GG-GGCUGU-GCUGCCA-GC----UUCAG---UGGAA---AUG---C-A-GUGGCUGACAGCAGCUCUGAGC----UUCUGGUUUCUGAGUCCUGACCUGG------ACAGGAUUC------------CCACUGGCCCAUCU-AGGAACUGGUGAUCC--------CUC------UUCCCU----CUCCAGAAGA---ACUUCUCCUCUGCUGAGGAAGGGCUG----GAGGGGA-GG-GGCUGU-GCUGCCA-GC----UUCAG---UGGAA---AUG---C-A-GUGGCUGACAGCAGCUCUGAGC----UUCUGGUUUCUGAGUCCUGACCUGG------ACAGGAUUC------------CCACUGGCCCAUCU-AGGAACUGGUGAUCC--------CUC------UUCCCU----CUCCAGAAGA---ACUUCUCCUCUGCUGAGGAAGGGCUG----GAGGGGA-GG-GGCUGU-GCUGCCA-GC----UUCAG---UGGAA---AUG---C-A-GUGGCUGACAGCAGCUCUGAGC----UUCUGGUUUCUGAGUCCUGACCUGG------ACAGGAUUC------------CCACUGGCCCAUCU-AGGAACUGGUGAUCC-------- |
| view | Cat |
AAC------UUCCCC----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAGGGGAGGG-GACUGU-GCUGCUUUGC----UUUG----UGAAG---ACC---A---AUGACUGACAGCAGCCCUUAGC----UUCUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCA--GAGUAU-UCCUUUGGACCACCU-AUGGGCUGUUGAUCC--------AAC------UUCCCC----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAGGGGAGGG-GACUGU-GCUGCUUUGC----UUUG----UGAAG---ACC---A---AUGACUGACAGCAGCCCUUAGC----UUCUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCA--GAGUAU-UCCUUUGGACCACCU-AUGGGCUGUUGAUCC--------AAC------UUCCCC----UC--UGCUGG---GCUUU----AGGUUGAGGAAGGGGCU----GAGGGGAGGG-GACUGU-GCUGCUUUGC----UUUG----UGAAG---ACC---A---AUGACUGACAGCAGCCCUUAGC----UUCUG-UCUCUGGGUCCUGGCCUGG------GUAGGAUUCCA--GAGUAU-UCCUUUGGACCACCU-AUGGGCUGUUGAUCC-------- |
| view | Dog |
AAC------UUCCCC----UC--UGCUGGGCUGCUUU----AGGUUGAGGGGAAGGCUG---GAGGGGAAGG-GAUGAU-ACUACUAUGC----UUUG----UGAAG---ACC---U---CUGCCUGGUGGUAGCCCUUAGU----UUCUG-GCUCUGGGUCCUGGUCUGA------GUAGGAUUCCA--GAGUAU-UUCUUUGGACCGUCU-CCGGGCUGUUGAUCC--------AAC------UUCCCC----UC--UGCUGGGCUGCUUU----AGGUUGAGGGGAAGGCUG---GAGGGGAAGG-GAUGAU-ACUACUAUGC----UUUG----UGAAG---ACC---U---CUGCCUGGUGGUAGCCCUUAGU----UUCUG-GCUCUGGGUCCUGGUCUGA------GUAGGAUUCCA--GAGUAU-UUCUUUGGACCGUCU-CCGGGCUGUUGAUCC--------AAC------UUCCCC----UC--UGCUGGGCUGCUUU----AGGUUGAGGGGAAGGCUG---GAGGGGAAGG-GAUGAU-ACUACUAUGC----UUUG----UGAAG---ACC---U---CUGCCUGGUGGUAGCCCUUAGU----UUCUG-GCUCUGGGUCCUGGUCUGA------GUAGGAUUCCA--GAGUAU-UUCUUUGGACCGUCU-CCGGGCUGUUGAUCC-------- |
| view | Elephant |
AGUGU----UUCCCU----CU---GCUGG---GCUUC----CAACGGAGGAAAGGGCU----GAGGAGACGG-GGCUGU-GCUGCCAUGC----UUUGA---UGGAG---ACC---U-AUGUGGCUGACAGCAACUCUUAGC----UUCUGGUCUCUGGGCCCCUGCCUGG------GUAGGAUUCCA--GGGUGU-UCUCCUUGCCCAUCU-AGGGGCUGUUGAUCC--------AGUGU----UUCCCU----CU---GCUGG---GCUUC----CAACGGAGGAAAGGGCU----GAGGAGACGG-GGCUGU-GCUGCCAUGC----UUUGA---UGGAG---ACC---U-AUGUGGCUGACAGCAACUCUUAGC----UUCUGGUCUCUGGGCCCCUGCCUGG------GUAGGAUUCCA--GGGUGU-UCUCCUUGCCCAUCU-AGGGGCUGUUGAUCC--------AGUGU----UUCCCU----CU---GCUGG---GCUUC----CAACGGAGGAAAGGGCU----GAGGAGACGG-GGCUGU-GCUGCCAUGC----UUUGA---UGGAG---ACC---U-AUGUGGCUGACAGCAACUCUUAGC----UUCUGGUCUCUGGGCCCCUGCCUGG------GUAGGAUUCCA--GGGUGU-UCUCCUUGCCCAUCU-AGGGGCUGUUGAUCC-------- |
| view | Cow |
GAC-------UCCCC----UC--UGCUGG---GCUUG----AGCUAGAGGAAGGGGCU----GAGGGGACGACGGCGGCGGCCGUGGUGC----UCGG----UAAAG----CU---G---GUGGCUGACAGCUUCCCUGAGCUGCUUUCUG-UCUCUGGGUCCUGGCCUGG------GUGGGGUUCCA--GGG-AU-UUUAUUGGACUCUCU------------AUCC--------GAC-------UCCCC----UC--UGCUGG---GCUUG----AGCUAGAGGAAGGGGCU----GAGGGGACGACGGCGGCGGCCGUGGUGC----UCGG----UAAAG----CU---G---GUGGCUGACAGCUUCCCUGAGCUGCUUUCUG-UCUCUGGGUCCUGGCCUGG------GUGGGGUUCCA--GGG-AU-UUUAUUGGACUCUCU------------AUCC--------GAC-------UCCCC----UC--UGCUGG---GCUUG----AGCUAGAGGAAGGGGCU----GAGGGGACGACGGCGGCGGCCGUGGUGC----UCGG----UAAAG----CU---G---GUGGCUGACAGCUUCCCUGAGCUGCUUUCUG-UCUCUGGGUCCUGGCCUGG------GUGGGGUUCCA--GGG-AU-UUUAUUGGACUCUCU------------AUCC-------- |
| view | Rabbit |
AAC------UUCCCC----CA---GCUGG---AGGUU----GGA---GUGGUAGUGCG----CUGGGGUAGG-A-GUGA-GCUGCUGUGC----UUUGG---UGAAG---ACC---C-AUGUGGCUGGCAUAGG-UAUUAGC----UACCG-CCUCUGG--CUUGGGU------------AGGGUCCA--UGCUGU-CCUGUUGGCCUGUCU--GGGAUGGUUGAUCCA-------AAC------UUCCCC----CA---GCUGG---AGGUU----GGA---GUGGUAGUGCG----CUGGGGUAGG-A-GUGA-GCUGCUGUGC----UUUGG---UGAAG---ACC---C-AUGUGGCUGGCAUAGG-UAUUAGC----UACCG-CCUCUGG--CUUGGGU------------AGGGUCCA--UGCUGU-CCUGUUGGCCUGUCU--GGGAUGGUUGAUCCA-------AAC------UUCCCC----CA---GCUGG---AGGUU----GGA---GUGGUAGUGCG----CUGGGGUAGG-A-GUGA-GCUGCUGUGC----UUUGG---UGAAG---ACC---C-AUGUGGCUGGCAUAGG-UAUUAGC----UACCG-CCUCUGG--CUUGGGU------------AGGGUCCA--UGCUGU-CCUGUUGGCCUGUCU--GGGAUGGUUGAUCCA------- |
| view | Guinea Pig |
AGC------GUCCCCUGAACC---GCUGA---GGAU-----------AAAGGGCGGCU----GAGGGGCUGG-G-CCGU-GCUGCUGUGC----UUCGA---UGA-----UCC---C-AUGUGGCUCACAGCAGCUCCUCUU----UAAUU-CCAU-----------------------------------------CUUUUGGUCCUGACC--GCGGUAGAUGUGCAGUCCAUCCAGC------GUCCCCUGAACC---GCUGA---GGAU-----------AAAGGGCGGCU----GAGGGGCUGG-G-CCGU-GCUGCUGUGC----UUCGA---UGA-----UCC---C-AUGUGGCUCACAGCAGCUCCUCUU----UAAUU-CCAU-----------------------------------------CUUUUGGUCCUGACC--GCGGUAGAUGUGCAGUCCAUCCAGC------GUCCCCUGAACC---GCUGA---GGAU-----------AAAGGGCGGCU----GAGGGGCUGG-G-CCGU-GCUGCUGUGC----UUCGA---UGA-----UCC---C-AUGUGGCUCACAGCAGCUCCUCUU----UAAUU-CCAU-----------------------------------------CUUUUGGUCCUGACC--GCGGUAGAUGUGCAGUCCAUCC |
| view | HedgeHog |
AGC------UUUCCC----UG--ACCUGG---GAUUU----AGG-----GGUAGAGCU----GAGGGGACUG------U-GUUGUUGUAC----AAGG----UAAAG---ACCUCAU---CCUACUAGAAAUAGUCAUUAGC----UUCUC---UCUGGGUCCUGGCCUGG------CUGGGAUUCCA--GAACAU-UCUAUUGGAUUACAU-AUGGGGUGUUGACCC--------AGC------UUUCCC----UG--ACCUGG---GAUUU----AGG-----GGUAGAGCU----GAGGGGACUG------U-GUUGUUGUAC----AAGG----UAAAG---ACCUCAU---CCUACUAGAAAUAGUCAUUAGC----UUCUC---UCUGGGUCCUGGCCUGG------CUGGGAUUCCA--GAACAU-UCUAUUGGAUUACAU-AUGGGGUGUUGACCC--------AGC------UUUCCC----UG--ACCUGG---GAUUU----AGG-----GGUAGAGCU----GAGGGGACUG------U-GUUGUUGUAC----AAGG----UAAAG---ACCUCAU---CCUACUAGAAAUAGUCAUUAGC----UUCUC---UCUGGGUCCUGGCCUGG------CUGGGAUUCCA--GAACAU-UCUAUUGGAUUACAU-AUGGGGUGUUGACCC-------- |
| view | Mouse |
AGC------UUCCUC----CC---UCUGU---G-----------------CUGCUCCU----GAAAGACAGG-G---------ACUGCCC----UGCCC---UGC-----UCU---CUUGAAAACCAACAGAGGUUCUUGCC----UGCUC-UCAGCAG----------------------GAAUCCA--GGGUGCACCUUUGGUACUGG--------------------------AGC------UUCCUC----CC---UCUGU---G-----------------CUGCUCCU----GAAAGACAGG-G---------ACUGCCC----UGCCC---UGC-----UCU---CUUGAAAACCAACAGAGGUUCUUGCC----UGCUC-UCAGCAG----------------------GAAUCCA--GGGUGCACCUUUGGUACUGG--------------------------AGC------UUCCUC----CC---UCUGU---G-----------------CUGCUCCU----GAAAGACAGG-G---------ACUGCCC----UGCCC---UGC-----UCU---CUUGAAAACCAACAGAGGUUCUUGCC----UGCUC-UCAGCAG----------------------GAAUCCA--GGGUGCACCUUUGGUACUGG-------------------------- |
| view | Shrew |
CAC------UUCCCC----AG--UUCUGG---GGUUC----AGGUU---GACGGAG-U----GGGAGGAGGG------A-GGUGGCAGGG----GAGGGGGCUGAAG---ACC-------CUCACAGCUGAUAGCCCUUACC----UUGUU---UCUGGGGC---------------UCGGGACCCC--------------------------GUGGGG-------CU--------CAC------UUCCCC----AG--UUCUGG---GGUUC----AGGUU---GACGGAG-U----GGGAGGAGGG------A-GGUGGCAGGG----GAGGGGGCUGAAG---ACC-------CUCACAGCUGAUAGCCCUUACC----UUGUU---UCUGGGGC---------------UCGGGACCCC--------------------------GUGGGG-------CU--------CAC------UUCCCC----AG--UUCUGG---GGUUC----AGGUU---GACGGAG-U----GGGAGGAGGG------A-GGUGGCAGGG----GAGGGGGCUGAAG---ACC-------CUCACAGCUGAUAGCCCUUACC----UUGUU---UCUGGGGC---------------UCGGGACCCC--------------------------GUGGGG-------CU-------- |
| view | Rat |
CAC------UUCCUC----CC---UCUGU---G-----------------CUACUCCU----GAAAGACAGG-G---------ACUG-CC----UGCCA---UGC-----CCU---C-AGAAAACCAACACAGGUUCUUACC----UAGUC-UCCACAG----------------------GAACCCA--GGGUGC-UCUUUGGGACUGG--------------------------CAC------UUCCUC----CC---UCUGU---G-----------------CUACUCCU----GAAAGACAGG-G---------ACUG-CC----UGCCA---UGC-----CCU---C-AGAAAACCAACACAGGUUCUUACC----UAGUC-UCCACAG----------------------GAACCCA--GGGUGC-UCUUUGGGACUGG--------------------------CAC------UUCCUC----CC---UCUGU---G-----------------CUACUCCU----GAAAGACAGG-G---------ACUG-CC----UGCCA---UGC-----CCU---C-AGAAAACCAACACAGGUUCUUACC----UAGUC-UCCACAG----------------------GAACCCA--GGGUGC-UCUUUGGGACUGG-------------------------- |
| view | Tenrec |
---------UGCCCU----CG---GUGGG---GCUUC----CCACUGAGGAGGGGGCGGGCAGAGGGGACGA-GGCUUG-GCUGCCCUGCAUAAUCUGG---UGGGG---AUC---C-AUGUGGCUGAUAGCAGCUCGUAGU----UUCCCAUCUCAGGUUCCUGGCCUGG------GUAGGGUUCCA--GGGUGU-CCUGCUGGCCCAUCU-AGGGGCUAUGGAUCC-----------------UGCCCU----CG---GUGGG---GCUUC----CCACUGAGGAGGGGGCGGGCAGAGGGGACGA-GGCUUG-GCUGCCCUGCAUAAUCUGG---UGGGG---AUC---C-AUGUGGCUGAUAGCAGCUCGUAGU----UUCCCAUCUCAGGUUCCUGGCCUGG------GUAGGGUUCCA--GGGUGU-CCUGCUGGCCCAUCU-AGGGGCUAUGGAUCC-----------------UGCCCU----CG---GUGGG---GCUUC----CCACUGAGGAGGGGGCGGGCAGAGGGGACGA-GGCUUG-GCUGCCCUGCAUAAUCUGG---UGGGG---AUC---C-AUGUGGCUGAUAGCAGCUCGUAGU----UUCCCAUCUCAGGUUCCUGGCCUGG------GUAGGGUUCCA--GGGUGU-CCUGCUGGCCCAUCU-AGGGGCUAUGGAUCC-------- |
| view | Opossum |
CUCCUCAUGUUUCCA----UG---GUUGG---G--UU----GAGUUGAGUAAGGGCCA----UACAGGAGGG-C--UAC-CCUGAAGAGA----UAGCU---CUUGG---ACC---U---CUGGUUUUUACUCACCAUGUCC----AGCUG---UCUGAAUUUUAAAGUGGCAGAGUCUAGGGUACCAAUGAGUAA-UCUCCUUGAUGUCAU------------------------CUCCUCAUGUUUCCA----UG---GUUGG---G--UU----GAGUUGAGUAAGGGCCA----UACAGGAGGG-C--UAC-CCUGAAGAGA----UAGCU---CUUGG---ACC---U---CUGGUUUUUACUCACCAUGUCC----AGCUG---UCUGAAUUUUAAAGUGGCAGAGUCUAGGGUACCAAUGAGUAA-UCUCCUUGAUGUCAU------------------------CUCCUCAUGUUUCCA----UG---GUUGG---G--UU----GAGUUGAGUAAGGGCCA----UACAGGAGGG-C--UAC-CCUGAAGAGA----UAGCU---CUUGG---ACC---U---CUGGUUUUUACUCACCAUGUCC----AGCUG---UCUGAAUUUUAAAGUGGCAGAGUCUAGGGUACCAAUGAGUAA-UCUCCUUGAUGUCAU------------------------ |
| view | Platypus |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Chicken |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Lizard |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Frog |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Zebrafish |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Stickleback |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Tetradon |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Fugu |
==================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Medaka |
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