Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
UCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCGUCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCGUCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCG |
view | Chimp |
CCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCGCCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCGCCCUCUCUGAGC--CUCUGCUUCCCAUCUGGACCCUGC-UGGG--CA-GGGCUU-CUGAGCUCCUUAGCACUAGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUC-AAAUGAGGACAGCAGAGCUCG |
view | Rhesus |
CCCUCUCUGAGC--CUCUGUUUCUCAUCUGGACCCCAC-UGGG--GA-GGGCUU-CUGAGCUCCUCAGCACUGGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUCAAAACGAGGACAGCAGAGCUCGCCCUCUCUGAGC--CUCUGUUUCUCAUCUGGACCCCAC-UGGG--GA-GGGCUU-CUGAGCUCCUCAGCACUGGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUCAAAACGAGGACAGCAGAGCUCGCCCUCUCUGAGC--CUCUGUUUCUCAUCUGGACCCCAC-UGGG--GA-GGGCUU-CUGAGCUCCUCAGCACUGGCAGGAGGGGC-------------------------UCCAG---GGGCC----CUCCCUCCAUGGCA-GCCAGGACAGGAC----UCUCAAAACGAGGACAGCAGAGCUCG |
view | Bushbaby |
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view | Tree Shrew |
CCCUCUCUGAGC--CUCAGUUUCUCUCCUGGA-CCUGC-CGAG--GC-AGGCUU-CUGCACUUCUCAGGGCUGACAGGAGGGGC-------------------------UCCAG---GG--C----CCUCCCCCGUGACAGGCUGGGACAGGAC----UCUU-GGAUGAGGACUGCAGACCUUGCCCUCUCUGAGC--CUCAGUUUCUCUCCUGGA-CCUGC-CGAG--GC-AGGCUU-CUGCACUUCUCAGGGCUGACAGGAGGGGC-------------------------UCCAG---GG--C----CCUCCCCCGUGACAGGCUGGGACAGGAC----UCUU-GGAUGAGGACUGCAGACCUUGCCCUCUCUGAGC--CUCAGUUUCUCUCCUGGA-CCUGC-CGAG--GC-AGGCUU-CUGCACUUCUCAGGGCUGACAGGAGGGGC-------------------------UCCAG---GG--C----CCUCCCCCGUGACAGGCUGGGACAGGAC----UCUU-GGAUGAGGACUGCAGACCUUG |
view | Horse |
CCUUCUCUGAAC--CUCAGCUUCUCAUCUGGACCUUGC-UGGA--AAGGGGCUU-CUCAGCUCCUCA-GGCUGAC-GGGGGGG--------------------------UCCAG---GGGCC----CUCUCCCCAUGAGAAGCCGGGACAGGAC----UCCU-GGACGAUGACCGUAGAGCUUGCCUUCUCUGAAC--CUCAGCUUCUCAUCUGGACCUUGC-UGGA--AAGGGGCUU-CUCAGCUCCUCA-GGCUGAC-GGGGGGG--------------------------UCCAG---GGGCC----CUCUCCCCAUGAGAAGCCGGGACAGGAC----UCCU-GGACGAUGACCGUAGAGCUUGCCUUCUCUGAAC--CUCAGCUUCUCAUCUGGACCUUGC-UGGA--AAGGGGCUU-CUCAGCUCCUCA-GGCUGAC-GGGGGGG--------------------------UCCAG---GGGCC----CUCUCCCCAUGAGAAGCCGGGACAGGAC----UCCU-GGACGAUGACCGUAGAGCUUG |
view | Armadillo |
-CUUCU--------CGCGGGCACAGAGCU-----------GGG--AG-AGGCUC-CUGCCUGCCUCAGGG-UGACAGGGAGGGCUCUGGACACCUGAGACUUGGACUGGCCCAGCCCCCACC----GCCCUUCCGUGACAAGCCAGGACUGGACGGACUGCC-GGUCCCGGGCUGCAGAGCACA-CUUCU--------CGCGGGCACAGAGCU-----------GGG--AG-AGGCUC-CUGCCUGCCUCAGGG-UGACAGGGAGGGCUCUGGACACCUGAGACUUGGACUGGCCCAGCCCCCACC----GCCCUUCCGUGACAAGCCAGGACUGGACGGACUGCC-GGUCCCGGGCUGCAGAGCACA-CUUCU--------CGCGGGCACAGAGCU-----------GGG--AG-AGGCUC-CUGCCUGCCUCAGGG-UGACAGGGAGGGCUCUGGACACCUGAGACUUGGACUGGCCCAGCCCCCACC----GCCCUUCCGUGACAAGCCAGGACUGGACGGACUGCC-GGUCCCGGGCUGCAGAGCACA |
view | Cat |
UCCUCUCUGAGC--CUCACCUUCUCCUCUGGACUCUGC-UGGA--GAAGGGCUA-CUGGGCUCCUCAGGGCUGGCUGGAGGGG--------------------------UCCAG---GAGUC----CUCCCCUCGUGAGAGGCCAGGACAGGAC----UCCU-GGAUGAGGACUGCAGAGCU--UCCUCUCUGAGC--CUCACCUUCUCCUCUGGACUCUGC-UGGA--GAAGGGCUA-CUGGGCUCCUCAGGGCUGGCUGGAGGGG--------------------------UCCAG---GAGUC----CUCCCCUCGUGAGAGGCCAGGACAGGAC----UCCU-GGAUGAGGACUGCAGAGCU--UCCUCUCUGAGC--CUCACCUUCUCCUCUGGACUCUGC-UGGA--GAAGGGCUA-CUGGGCUCCUCAGGGCUGGCUGGAGGGG--------------------------UCCAG---GAGUC----CUCCCCUCGUGAGAGGCCAGGACAGGAC----UCCU-GGAUGAGGACUGCAGAGCU-- |
view | Dog |
=============================GGACCCUGC-UGUG--GAGGGGCCA-CUGAACUCCUCAGGGUCAACAGGAGAGG--------------------------UCCAG---CCGCCUCCAUCCCCUCCAUGAGAGCCCAGGCCAGGAC----UCCU-GGAUGAGGACCGCAGAGCUUG=============================GGACCCUGC-UGUG--GAGGGGCCA-CUGAACUCCUCAGGGUCAACAGGAGAGG--------------------------UCCAG---CCGCCUCCAUCCCCUCCAUGAGAGCCCAGGCCAGGAC----UCCU-GGAUGAGGACCGCAGAGCUUG=============================GGACCCUGC-UGUG--GAGGGGCCA-CUGAACUCCUCAGGGUCAACAGGAGAGG--------------------------UCCAG---CCGCCUCCAUCCCCUCCAUGAGAGCCCAGGCCAGGAC----UCCU-GGAUGAGGACCGCAGAGCUUG |
view | Elephant |
CCCUCU--------CUCAG---------------------------------CC-UUGACUUUGACAGUA-GGGCGGGG--------------CUGUGACUGCGGAUGAUCCAG-CCCUGCC----CUCCCCCCAUGACAGACCUGCAUUGGAC-----------------UCUGUGGAGCUUACCCUCU--------CUCAG---------------------------------CC-UUGACUUUGACAGUA-GGGCGGGG--------------CUGUGACUGCGGAUGAUCCAG-CCCUGCC----CUCCCCCCAUGACAGACCUGCAUUGGAC-----------------UCUGUGGAGCUUACCCUCU--------CUCAG---------------------------------CC-UUGACUUUGACAGUA-GGGCGGGG--------------CUGUGACUGCGGAUGAUCCAG-CCCUGCC----CUCCCCCCAUGACAGACCUGCAUUGGAC-----------------UCUGUGGAGCUUA |
view | Cow |
UCCUCUCUGAGCCUCUCAGCCUUUCAUCUGGACUUUGCAAAGG--AAGGGGCUU-CUGAGCUUCUCGGGGCUGACAGCAGGGG--------------------------GCCAG---GAGCC----CUCUCCCUUUGAGAGGCCGGGGCAGAAC----UUCU-GGAUGAAGAUUACGGAGCUGGUCCUCUCUGAGCCUCUCAGCCUUUCAUCUGGACUUUGCAAAGG--AAGGGGCUU-CUGAGCUUCUCGGGGCUGACAGCAGGGG--------------------------GCCAG---GAGCC----CUCUCCCUUUGAGAGGCCGGGGCAGAAC----UUCU-GGAUGAAGAUUACGGAGCUGGUCCUCUCUGAGCCUCUCAGCCUUUCAUCUGGACUUUGCAAAGG--AAGGGGCUU-CUGAGCUUCUCGGGGCUGACAGCAGGGG--------------------------GCCAG---GAGCC----CUCUCCCUUUGAGAGGCCGGGGCAGAAC----UUCU-GGAUGAAGAUUACGGAGCUGG |
view | Rabbit |
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view | Guinea Pig |
CUCCAU-AGAGC--CUUGACUUCUCAUCUGGACCUUGC-UGGGGACA-UGGCUU-CUGAGC--------ACCACAGGAA--GGC-------------------------UGCAG---GG--U----CCUGCUCCGUGAU----------------------------AAGGACUGCAGGGUGCACUCCAU-AGAGC--CUUGACUUCUCAUCUGGACCUUGC-UGGGGACA-UGGCUU-CUGAGC--------ACCACAGGAA--GGC-------------------------UGCAG---GG--U----CCUGCUCCGUGAU----------------------------AAGGACUGCAGGGUGCACUCCAU-AGAGC--CUUGACUUCUCAUCUGGACCUUGC-UGGGGACA-UGGCUU-CUGAGC--------ACCACAGGAA--GGC-------------------------UGCAG---GG--U----CCUGCUCCGUGAU----------------------------AAGGACUGCAGGGUGCA |
view | HedgeHog |
CCCUC---AAGC--CUCAGUUUCUUGCCU-GGCCUUGC-UAGG--AA-GGGCUU-CUGAGCCUCCCA--GCCUGCAGGAAGGG--------------------------ACCCA---GACCC----CCC-------------------------------------------------------CCCUC---AAGC--CUCAGUUUCUUGCCU-GGCCUUGC-UAGG--AA-GGGCUU-CUGAGCCUCCCA--GCCUGCAGGAAGGG--------------------------ACCCA---GACCC----CCC-------------------------------------------------------CCCUC---AAGC--CUCAGUUUCUUGCCU-GGCCUUGC-UAGG--AA-GGGCUU-CUGAGCCUCCCA--GCCUGCAGGAAGGG--------------------------ACCCA---GACCC----CCC------------------------------------------------------- |
view | Mouse |
CCUC---AGACC--CUCAGUUUCCCACCUGGACCUUGU-GGAGAAUA-UGGAUUCCUGAGCCUCUUUAGACUCAAAGAAGGGGA-------------------------UCCAC---AG--U----CCU-CCCCAUGACU-----------------------CAAAGAGGACUGCAGGGUUUACCUC---AGACC--CUCAGUUUCCCACCUGGACCUUGU-GGAGAAUA-UGGAUUCCUGAGCCUCUUUAGACUCAAAGAAGGGGA-------------------------UCCAC---AG--U----CCU-CCCCAUGACU-----------------------CAAAGAGGACUGCAGGGUUUACCUC---AGACC--CUCAGUUUCCCACCUGGACCUUGU-GGAGAAUA-UGGAUUCCUGAGCCUCUUUAGACUCAAAGAAGGGGA-------------------------UCCAC---AG--U----CCU-CCCCAUGACU-----------------------CAAAGAGGACUGCAGGGUUUA |
view | Shrew |
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view | Rat |
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view | Tenrec |
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view | Opossum |
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view | Platypus |
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view | Chicken |
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view | Lizard |
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view | Frog |
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view | Zebrafish |
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view | Stickleback |
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view | Tetradon |
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view | Fugu |
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view | Medaka |
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