mir-599
chr8:100618020-100618154
View MI0003611 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human C-------U-GGGAAUACGUUUAAUGCCAAAGACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACUUGGAUGAC--AGUCAAUU-CAGUUAAAGGA
view Chimp C-------U-GGGAAUAUGUUUAAUGCCAAAGACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACUUGGAUGAC--AGUCAAUU-CAGUUAAAGGA
view Rhesus C-------U-GGGAAUGUGUUUAAUGCCAAAGACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACUUGGAUGAC--AGUCAAUU-CAGUUAAAGGA
view Bushbaby C-------A-GAAAAUGUGUUCGAGGCCAAAG-CAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUGUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--AGUCAAUUUCUGUAAAGGGA
view Tree Shrew C-------U-GGGAACAUAUUCAAUGACGAGGACAUGCUAUCCACAAUGUGUU----------UGAUAAGCUGAUAUAGGAC-AGGGAUUUUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUAUCUGGAUGAU--AGUCGAUU-UAAUUAAAAAA
view Horse C-------U-GGGAAUGUGUUCACUGCCACAGACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGACUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--UGUCAGUU-CAGUUAGAGGA
view Armadillo ==================================================================================================================================------AAUCAAUU-UAGUUAAAGGA
view Cat C-------U-GGUAAUGUGUUCAAUGCCACAGACAUGCUGUCCAUAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--AGUCAAUU-CAGUUAGAGGA
view Dog C-------U-GGGAAUGUGUUUAAUGCCAAAGACCUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGAUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGAUGAC--ACUCAAUU-CAGCUAGAGGA
view Elephant C-------U-GGAAAUGUGUUCAAUGUCAACUACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGAUUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--AGUCAAUU-CAGUUAAAGGA
view Cow C-------U-GGAAAUCUUUUCAGUGCCAAAGACGUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGGACUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACGUGGAUGAC--AUUCAAUU-CAGUUAGAGGA
view Rabbit C-------UUGAGAAUGUGUUCAAUGGUUAAGACAUGCUGUCCAUAGUGUGUU----------UGAUAAGCCGACAUGGGAC-AGGGACUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--AGUCAAUU-CAAUUAGAGGU
view Guinea Pig ================================================================================================ACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGAU--G--AGUCAAUU-CAGUUAAAGGA
view HedgeHog C-------U-GGGAAUGUGUUUAAUGCCAGAGACAUGCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGAAUUCUUUUCACUGUUUUGUCAGUUUAUCAAACCCAUACCUGGAUGAU--AGUCAAUG-CAAUUAGAGGA
view Mouse C-------U-GCAGCUGUACUCA-CCACAAAGAUGUGCUGUCCACAGUGUAUU----------UGAUAAGAUGACAUAGGAG-AGGAACUUCUUUCACCUUUGUGUCAGUUUAUCAAACCCAUACCUGGAUGAC--AAGCAAUU-CAAUGGAAGGA
view Shrew ============================================================================================================================================================
view Rat C-------U-GCUGCGGUACUG---CACGCAGACGUGCUGUCCAGUGUGUGU-----------------GGUGGCACUGGAG-AGGAGCUUCUUCCACCUCCGUGUCAGUUCAUCAAACCCAGACUUUU----C--GGGGAAGU-CGAUGAAAAGA
view Tenrec C-------U-GAGAACGUGUUUCACGUCAAUGACAUCCUGUCCACAGUGUGUU----------UGAUAAGCUGACAUGGGAC-AGGAUUUCUCUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGACGAC--AGUCAAUC-CAGCUAAAGGU
view Opossum --------U-AGGAAAGGGCUCAAUGAAAAGGACAAACUGUCCAGAGUGUGUU----------UGAUAAUCUGACAUGGGAC-AGAGGUUCUUUUCACUGUUGUGUCAGUUUAUCAAACCCAUACCUGGAUACC--AGUCAGUA-CAGUUAAGGAA
view Platypus C-------A-GGAAAGGUGCACACGGUGAAAAACACACUGUCCUCAGUGCGUU----------UGAUAAGCUAACAUGAGAC-AGGAGCUUUUUUUACGGUUGUGUCAGUGUAUCAGACACAAGCCUGAGCACC--AAUUGAUU-CCGUUAUAGAA
view Chicken UACAGGUCU-GUUAAUGGUAAAUACCAUAAUGGUAAAAUCUACAAGAUAUACUGACUACAGUUUGACAAACUGACUUGAGGU--GGGAUAUUUCUGACUGUUGUGUCAGUGUAUCAAAAUCAUACCUAAA--AUUCAGUCAAUU-UCUGUAAGAAA
view Lizard U-------U-UUGCAUGAGAAG------AAAGGGAGAACAUCCAUAAUGUUCU----------UGAUCACCUACCAUGGGGACAGGAAUCCUUUUUACCACUGUAUCGGUUUAUCAAAUCCAUAUAUGGA==========================
view Frog ============================================================================================================================================================
view Zebrafish ============================================================================================================================================================
view Stickleback ============================================================================================================================================================
view Tetradon ============================================================================================================================================================
view Fugu ============================================================================================================================================================
view Medaka ============================================================================================================================================================

There are no comments yet

Leave a Comment


?
?

Powered by TalkBack