mir-587
chr6:107338673-107338808
View MI0003595 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human A--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUGA--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUGA--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUG
view Chimp A--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUGA--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUGA--AAAGGUCUCUUUCUG-CCCCUCCUAUGCACCCUCUUUCCAUA-GGUGAU-GAGUC-ACAGGGCUCAGGGAAUGUGUCUGCACCUGUGACUCAUCACCAGUGGAAAGCCCAUCCCAUAUCCCACCU---AAACCACUCUUUG
view Rhesus A--AAGGGUCUCUUUCUGCCCCCUCCUAGGCACCCUCUUUCCACA-GGUGAU-GAGUU-ACAGGGCCCAGGGAAUGUGUCUGCACCUGUGACUCAUCACUGGUGGAAG------CCCAUACGCCACCC---AAACCACUCUUUGA--AAGGGUCUCUUUCUGCCCCCUCCUAGGCACCCUCUUUCCACA-GGUGAU-GAGUU-ACAGGGCCCAGGGAAUGUGUCUGCACCUGUGACUCAUCACUGGUGGAAG------CCCAUACGCCACCC---AAACCACUCUUUGA--AAGGGUCUCUUUCUGCCCCCUCCUAGGCACCCUCUUUCCACA-GGUGAU-GAGUU-ACAGGGCCCAGGGAAUGUGUCUGCACCUGUGACUCAUCACUGGUGGAAG------CCCAUACGCCACCC---AAACCACUCUUUG
view Bushbaby A--AAGGAUCUCUCUCUG-GCUC============================================================================================================---UCUCUCUCUGA--AAGGAUCUCUCUCUG-GCUC============================================================================================================---UCUCUCUCUGA--AAGGAUCUCUCUCUG-GCUC============================================================================================================---UCUCUCUCUG
view Tree Shrew GUCAGGGUUCUCUUUCUG-GCCCAUUUAUGCACCCUCUCUCCACAGGGUGAU-AAGUC-ACAGCACCCAGGAAA--UGUCCACAC-------------------AAAG------CCCAUAUCUCAUCU---AGACCACUCUUUGGUCAGGGUUCUCUUUCUG-GCCCAUUUAUGCACCCUCUCUCCACAGGGUGAU-AAGUC-ACAGCACCCAGGAAA--UGUCCACAC-------------------AAAG------CCCAUAUCUCAUCU---AGACCACUCUUUGGUCAGGGUUCUCUUUCUG-GCCCAUUUAUGCACCCUCUCUCCACAGGGUGAU-AAGUC-ACAGCACCCAGGAAA--UGUCCACAC-------------------AAAG------CCCAUAUCUCAUCU---AGACCACUCUUUG
view Horse A--AGGGAUGCCUCUCUG-GCCCUCCCGGGCACCCUCUCCCCACAGGGUGAU-GAGUC-UCAGGGCCCAGGAAAUGUGUCCACCC-------------------AAAG------CCCACACCUCACCU---AGACCACUCUUUGA--AGGGAUGCCUCUCUG-GCCCUCCCGGGCACCCUCUCCCCACAGGGUGAU-GAGUC-UCAGGGCCCAGGAAAUGUGUCCACCC-------------------AAAG------CCCACACCUCACCU---AGACCACUCUUUGA--AGGGAUGCCUCUCUG-GCCCUCCCGGGCACCCUCUCCCCACAGGGUGAU-GAGUC-UCAGGGCCCAGGAAAUGUGUCCACCC-------------------AAAG------CCCACACCUCACCU---AGACCACUCUUUG
view Armadillo ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Cat ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Dog ===================================================================================================================================AGACCAUUCUUUG===================================================================================================================================AGACCAUUCUUUG===================================================================================================================================AGACCAUUCUUUG
view Elephant A--GAAGGUCCCACUUUG-GCCCCCUUGGGUGCCCCUUCCCCACAGGACAAU-GAGUCUGCAGGGCCCAGGAGAUGUGUCCAUCC-------------------AAAG--------CAUACCCCACAUUCUAGAUGACUCUUUGA--GAAGGUCCCACUUUG-GCCCCCUUGGGUGCCCCUUCCCCACAGGACAAU-GAGUCUGCAGGGCCCAGGAGAUGUGUCCAUCC-------------------AAAG--------CAUACCCCACAUUCUAGAUGACUCUUUGA--GAAGGUCCCACUUUG-GCCCCCUUGGGUGCCCCUUCCCCACAGGACAAU-GAGUCUGCAGGGCCCAGGAGAUGUGUCCAUCC-------------------AAAG--------CAUACCCCACAUUCUAGAUGACUCUUUG
view Cow A--AAGAGUGCCUUCCU---------CAGGCAUCCUGUCCAUACAGGGUGAU-GUGUU-CCAGGGACCCAGGAAUGUGUCUACCU-------------------AGAG------CUCAUACCUCACCU---AGACCUCCCU---A--AAGAGUGCCUUCCU---------CAGGCAUCCUGUCCAUACAGGGUGAU-GUGUU-CCAGGGACCCAGGAAUGUGUCUACCU-------------------AGAG------CUCAUACCUCACCU---AGACCUCCCU---A--AAGAGUGCCUUCCU---------CAGGCAUCCUGUCCAUACAGGGUGAU-GUGUU-CCAGGGACCCAGGAAUGUGUCUACCU-------------------AGAG------CUCAUACCUCACCU---AGACCUCCCU---
view Rabbit ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Guinea Pig ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view HedgeHog ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Mouse A--GGAGAUCUCCCUCUG-CCCUCCGUGGGCAUCAUUUUCCCCCA-GUGGAACCCAUC-ACAAAGGCCAGGAAAUGUGUCUGCUC-AGUG-CCCUUCACCG----------CAUUCCAGACCUCUCCU--------------UAA--GGAGAUCUCCCUCUG-CCCUCCGUGGGCAUCAUUUUCCCCCA-GUGGAACCCAUC-ACAAAGGCCAGGAAAUGUGUCUGCUC-AGUG-CCCUUCACCG----------CAUUCCAGACCUCUCCU--------------UAA--GGAGAUCUCCCUCUG-CCCUCCGUGGGCAUCAUUUUCCCCCA-GUGGAACCCAUC-ACAAAGGCCAGGAAAUGUGUCUGCUC-AGUG-CCCUUCACCG----------CAUUCCAGACCUCUCCU--------------UA
view Shrew ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Rat A--GGGGGUCUCCCUCUG-CCUUCCAGGCGCAUCA-UUCCCCACA-GUGGAA-CGAUC-ACAGAGGCCAGGGGAUGUGUCCUCUC-GGUG----UUCACCA----------CAUUGCAGAUCUCUCCU--------------UAA--GGGGGUCUCCCUCUG-CCUUCCAGGCGCAUCA-UUCCCCACA-GUGGAA-CGAUC-ACAGAGGCCAGGGGAUGUGUCCUCUC-GGUG----UUCACCA----------CAUUGCAGAUCUCUCCU--------------UAA--GGGGGUCUCCCUCUG-CCUUCCAGGCGCAUCA-UUCCCCACA-GUGGAA-CGAUC-ACAGAGGCCAGGGGAUGUGUCCUCUC-GGUG----UUCACCA----------CAUUGCAGAUCUCUCCU--------------UA
view Tenrec A--AAGGAGCCCACUCUG-ACCCUCUUGGUUAUCCCCUCCCCACAAGGAAAU-GAGUCCAUAGGUCUCGGGGAAUGUGUCCAUCC-------------------AAAG--------CAUAUCCCACGUUCCAGAUGACUCUUGGA--AAGGAGCCCACUCUG-ACCCUCUUGGUUAUCCCCUCCCCACAAGGAAAU-GAGUCCAUAGGUCUCGGGGAAUGUGUCCAUCC-------------------AAAG--------CAUAUCCCACGUUCCAGAUGACUCUUGGA--AAGGAGCCCACUCUG-ACCCUCUUGGUUAUCCCCUCCCCACAAGGAAAU-GAGUCCAUAGGUCUCGGGGAAUGUGUCCAUCC-------------------AAAG--------CAUAUCCCACGUUCCAGAUGACUCUUGG
view Opossum ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Platypus ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Chicken ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Lizard ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Frog ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Zebrafish ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Stickleback ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Tetradon ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Fugu ================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Medaka ================================================================================================================================================================================================================================================================================================================================================================================================================================================

There are no comments yet

Leave a Comment


?
?

Powered by TalkBack