Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
UC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACAUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----UUC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACAUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----UUC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACAUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----U |
view | Chimp |
UC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACGUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UUUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----UUC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACGUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UUUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----UUC----AAAUUCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAU--UGUAUUUUUAGGUCCCAAUACGUGUGGG-----CCCUAAAAAUACAAUGCAUAAUGGU-------------------UUUUCAC-UUUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----AUGUAAAUGAA----AAAA----U |
view | Rhesus |
UC----AAAUGCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAUAUUGUAUUUUUAGGUCCCAAUACGUGUGGA-----CCCUAAAAAUGCAAUGCAUAAUGGU-------------------UUUAUAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----ACAUAAACUAA----AAAA----UUC----AAAUGCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAUAUUGUAUUUUUAGGUCCCAAUACGUGUGGA-----CCCUAAAAAUGCAAUGCAUAAUGGU-------------------UUUAUAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----ACAUAAACUAA----AAAA----UUC----AAAUGCUUAUUAAAAGA--CAUGGGGUAAAACCAUUAUGCAUAUUGUAUUUUUAGGUCCCAAUACGUGUGGA-----CCCUAAAAAUGCAAUGCAUAAUGGU-------------------UUUAUAC-UCUUUAUCUU---------C----UUAU---U------------------------------------------------------------------------UU----ACAUAAACUAA----AAAA----U |
view | Bushbaby |
UC----AGAUUCUUGUUAAAAAAAACACAAGGAAAGA------UGCAU--UGUACAUAUGGG---------------A-----GUCUAAAAAUAAGAUAGACAAUAGU-------------------UUUAUA-------GGUUU---------C----UUAU---U------------------------------------------------------------------------UU----CAGUAAACUAA----AAAA----AUC----AGAUUCUUGUUAAAAAAAACACAAGGAAAGA------UGCAU--UGUACAUAUGGG---------------A-----GUCUAAAAAUAAGAUAGACAAUAGU-------------------UUUAUA-------GGUUU---------C----UUAU---U------------------------------------------------------------------------UU----CAGUAAACUAA----AAAA----AUC----AGAUUCUUGUUAAAAAAAACACAAGGAAAGA------UGCAU--UGUACAUAUGGG---------------A-----GUCUAAAAAUAAGAUAGACAAUAGU-------------------UUUAUA-------GGUUU---------C----UUAU---U------------------------------------------------------------------------UU----CAGUAAACUAA----AAAA----A |
view | Tree Shrew |
CC----CAAUAACUUUCAGAAGA--AAUGAGGAAUGA------AGCAC--UG-GUAUAUAGC-----AUACAUGUGGG------CCUAAAAAUACAAAGGAUGAAAAU-------------------UUU--AG-UCUUGAUAUU---------C----UUAU---UGGGUCGUCUGGAAAGUCGUGAUCCCUUUUUGCAUAGAAAAAUGCAUUAUGACUUUCUUGAUAAUCUAAUAUUUU----UAGGAAACUAA----AAAAAGUGUCC----CAAUAACUUUCAGAAGA--AAUGAGGAAUGA------AGCAC--UG-GUAUAUAGC-----AUACAUGUGGG------CCUAAAAAUACAAAGGAUGAAAAU-------------------UUU--AG-UCUUGAUAUU---------C----UUAU---UGGGUCGUCUGGAAAGUCGUGAUCCCUUUUUGCAUAGAAAAAUGCAUUAUGACUUUCUUGAUAAUCUAAUAUUUU----UAGGAAACUAA----AAAAAGUGUCC----CAAUAACUUUCAGAAGA--AAUGAGGAAUGA------AGCAC--UG-GUAUAUAGC-----AUACAUGUGGG------CCUAAAAAUACAAAGGAUGAAAAU-------------------UUU--AG-UCUUGAUAUU---------C----UUAU---UGGGUCGUCUGGAAAGUCGUGAUCCCUUUUUGCAUAGAAAAAUGCAUUAUGACUUUCUUGAUAAUCUAAUAUUUU----UAGGAAACUAA----AAAAAGUGU |
view | Horse |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Armadillo |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Cat |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Dog |
AU----AGGUGCCUGUUAUAAGA--CAUGGGAAAAGA-------ACAC--UGUUUACAUUAU-----GUAAAUAGGG------CCUUAAAAAUAUAAAGCAUAAUAGU-------------------UUGAUAG-UCUUGACUCU---------C----UUAU---U------------------------------------------------------------------------UUUUU-CAGUAAAAUAA----AAAA----UAU----AGGUGCCUGUUAUAAGA--CAUGGGAAAAGA-------ACAC--UGUUUACAUUAU-----GUAAAUAGGG------CCUUAAAAAUAUAAAGCAUAAUAGU-------------------UUGAUAG-UCUUGACUCU---------C----UUAU---U------------------------------------------------------------------------UUUUU-CAGUAAAAUAA----AAAA----UAU----AGGUGCCUGUUAUAAGA--CAUGGGAAAAGA-------ACAC--UGUUUACAUUAU-----GUAAAUAGGG------CCUUAAAAAUAUAAAGCAUAAUAGU-------------------UUGAUAG-UCUUGACUCU---------C----UUAU---U------------------------------------------------------------------------UUUUU-CAGUAAAAUAA----AAAA----U |
view | Elephant |
UC----AAAU-CCUGGUAGAAGA--CAUGGGGAAAAA------AAUAC--UGUUUAUAUAGC-----ACAUAUAGGG------AUUUAUAAAUAAAAAGCAUAGUAGU-------------------UUUACAA-CCUUGAUUUU---------C-CUAUUCU---U------------------------------------------------------------------------UU----CAAUACACUAAGAAAAUAA----CUC----AAAU-CCUGGUAGAAGA--CAUGGGGAAAAA------AAUAC--UGUUUAUAUAGC-----ACAUAUAGGG------AUUUAUAAAUAAAAAGCAUAGUAGU-------------------UUUACAA-CCUUGAUUUU---------C-CUAUUCU---U------------------------------------------------------------------------UU----CAAUACACUAAGAAAAUAA----CUC----AAAU-CCUGGUAGAAGA--CAUGGGGAAAAA------AAUAC--UGUUUAUAUAGC-----ACAUAUAGGG------AUUUAUAAAUAAAAAGCAUAGUAGU-------------------UUUACAA-CCUUGAUUUU---------C-CUAUUCU---U------------------------------------------------------------------------UU----CAAUACACUAAGAAAAUAA----C |
view | Cow |
AU----AGAUGCCCUUUACAAGA--CAGGGGGAAAGA-------GCAA--UGUUUACAUAAC-------ACAUAGGG------ACUUAAAAAUUCAAAGCAUAAUAGU-------------------UUUAUAG-UCUUAACUUU---------C----UUAU---U------------------------------------------------------------------------UUUUUUCAGUAAACUAA----GAAA----UAU----AGAUGCCCUUUACAAGA--CAGGGGGAAAGA-------GCAA--UGUUUACAUAAC-------ACAUAGGG------ACUUAAAAAUUCAAAGCAUAAUAGU-------------------UUUAUAG-UCUUAACUUU---------C----UUAU---U------------------------------------------------------------------------UUUUUUCAGUAAACUAA----GAAA----UAU----AGAUGCCCUUUACAAGA--CAGGGGGAAAGA-------GCAA--UGUUUACAUAAC-------ACAUAGGG------ACUUAAAAAUUCAAAGCAUAAUAGU-------------------UUUAUAG-UCUUAACUUU---------C----UUAU---U------------------------------------------------------------------------UUUUUUCAGUAAACUAA----GAAA----U |
view | Rabbit |
U------AAUGCUUGUUAGAAAA--UAUAGGGAGAGU------AGCAC--UGUUGAUACGAU-----AUCUGGCGGC---------CUGAAAUACAAAGCUUAAUAGU-------------------UUUGUAG-UCUUGAUUUU---------C----UUGU---U------------------------------------------------------------------------CU----CAGUACAGUAA----AAUA-----U------AAUGCUUGUUAGAAAA--UAUAGGGAGAGU------AGCAC--UGUUGAUACGAU-----AUCUGGCGGC---------CUGAAAUACAAAGCUUAAUAGU-------------------UUUGUAG-UCUUGAUUUU---------C----UUGU---U------------------------------------------------------------------------CU----CAGUACAGUAA----AAUA-----U------AAUGCUUGUUAGAAAA--UAUAGGGAGAGU------AGCAC--UGUUGAUACGAU-----AUCUGGCGGC---------CUGAAAUACAAAGCUUAAUAGU-------------------UUUGUAG-UCUUGAUUUU---------C----UUGU---U------------------------------------------------------------------------CU----CAGUACAGUAA----AAUA----- |
view | Guinea Pig |
==----AAAUGCCCAGUAGGAGA--UGUGGGGAAAGA------AACCC--UGCUUAUAUUAU-----AUACAUGGGAA-----CCCUAAAAAUUCAAAGCAUACUAGU-------------------UUUAUAG-UUUUACUUUUUUU------U----UUUU---U------------------------------------------------------------------------UG----CAGUAAACUAG----AAAA-----==----AAAUGCCCAGUAGGAGA--UGUGGGGAAAGA------AACCC--UGCUUAUAUUAU-----AUACAUGGGAA-----CCCUAAAAAUUCAAAGCAUACUAGU-------------------UUUAUAG-UUUUACUUUUUUU------U----UUUU---U------------------------------------------------------------------------UG----CAGUAAACUAG----AAAA-----==----AAAUGCCCAGUAGGAGA--UGUGGGGAAAGA------AACCC--UGCUUAUAUUAU-----AUACAUGGGAA-----CCCUAAAAAUUCAAAGCAUACUAGU-------------------UUUAUAG-UUUUACUUUUUUU------U----UUUU---U------------------------------------------------------------------------UG----CAGUAAACUAG----AAAA----- |
view | HedgeHog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Mouse |
UC----AUACGUUUAGUGGAAGA--UU---GGAAAGA------GCCAC--UGCUUAGCCGGU-----AGAAAAGGGC---------------UUCACAGUGC--------------------------CUGUAGAUCUCAGUCUUAAU------C----UUGC---U------------------------------------------------------------------------UU----CAGUGAGCUAA----GAAA----GUC----AUACGUUUAGUGGAAGA--UU---GGAAAGA------GCCAC--UGCUUAGCCGGU-----AGAAAAGGGC---------------UUCACAGUGC--------------------------CUGUAGAUCUCAGUCUUAAU------C----UUGC---U------------------------------------------------------------------------UU----CAGUGAGCUAA----GAAA----GUC----AUACGUUUAGUGGAAGA--UU---GGAAAGA------GCCAC--UGCUUAGCCGGU-----AGAAAAGGGC---------------UUCACAGUGC--------------------------CUGUAGAUCUCAGUCUUAAU------C----UUGC---U------------------------------------------------------------------------UU----CAGUGAGCUAA----GAAA----G |
view | Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Rat |
UC----ACAUGUUUAAUGGAAGC--UU---AGAAAGA------GCCAC--UGCUUGGCCAGU-----AGAAAAGGGC---------------UUCACAGUGC---------------------------UGCAGGUCUCAGUCUUAGU------C----UUGU---U------------------------------------------------------------------------UG----CAGGAAGCUAA----GAAG----GUC----ACAUGUUUAAUGGAAGC--UU---AGAAAGA------GCCAC--UGCUUGGCCAGU-----AGAAAAGGGC---------------UUCACAGUGC---------------------------UGCAGGUCUCAGUCUUAGU------C----UUGU---U------------------------------------------------------------------------UG----CAGGAAGCUAA----GAAG----GUC----ACAUGUUUAAUGGAAGC--UU---AGAAAGA------GCCAC--UGCUUGGCCAGU-----AGAAAAGGGC---------------UUCACAGUGC---------------------------UGCAGGUCUCAGUCUUAGU------C----UUGU---U------------------------------------------------------------------------UG----CAGGAAGCUAA----GAAG----G |
view | Tenrec |
UC----AAAUGUCUUUCAGAA----CAUGGG-----A------AAUAU--UGUUUAUGUA-------ACAUGUAGGG------AUUUAAAAAUACAGAACAUAAUAGU-------------------UUCAUAA-UCUUGAUUUC---------AAUUAUUAU---C------------------------------------------------------------------------UU----CAGUAACUUAA----ACAA----UUC----AAAUGUCUUUCAGAA----CAUGGG-----A------AAUAU--UGUUUAUGUA-------ACAUGUAGGG------AUUUAAAAAUACAGAACAUAAUAGU-------------------UUCAUAA-UCUUGAUUUC---------AAUUAUUAU---C------------------------------------------------------------------------UU----CAGUAACUUAA----ACAA----UUC----AAAUGUCUUUCAGAA----CAUGGG-----A------AAUAU--UGUUUAUGUA-------ACAUGUAGGG------AUUUAAAAAUACAGAACAUAAUAGU-------------------UUCAUAA-UCUUGAUUUC---------AAUUAUUAU---C------------------------------------------------------------------------UU----CAGUAACUUAA----ACAA----U |
view | Opossum |
UC-------UAACUUAUAUAAGA--UACCAAGAAUAAUUUUAGAGUUU--UGAGUUUUGUGU------------------------------------------------------------------UUGCA--UCAUUCUCUU---------C----UGACACAU------------------------------------------------------------------------CA----CAGGUAGUUAA----UAUA-----UC-------UAACUUAUAUAAGA--UACCAAGAAUAAUUUUAGAGUUU--UGAGUUUUGUGU------------------------------------------------------------------UUGCA--UCAUUCUCUU---------C----UGACACAU------------------------------------------------------------------------CA----CAGGUAGUUAA----UAUA-----UC-------UAACUUAUAUAAGA--UACCAAGAAUAAUUUUAGAGUUU--UGAGUUUUGUGU------------------------------------------------------------------UUGCA--UCAUUCUCUU---------C----UGACACAU------------------------------------------------------------------------CA----CAGGUAGUUAA----UAUA----- |
view | Platypus |
UAUUAGCCUUAUUAGUGAGAAGA--CAU--GGAAAAA------AUGGG--UAUUUAUUGAGC-----AAACACUAGGGGCUAGGGUUAUUAAUACCAAAUAUCAAAAUCUUACCAACCAGCCCUGUGUUUUCAG-UCACUUUUUUAGUGUGUUUU----UGCU---U------------------------------------------------------------------------UU----CUUUAAAUAAA----AAAA-----UAUUAGCCUUAUUAGUGAGAAGA--CAU--GGAAAAA------AUGGG--UAUUUAUUGAGC-----AAACACUAGGGGCUAGGGUUAUUAAUACCAAAUAUCAAAAUCUUACCAACCAGCCCUGUGUUUUCAG-UCACUUUUUUAGUGUGUUUU----UGCU---U------------------------------------------------------------------------UU----CUUUAAAUAAA----AAAA-----UAUUAGCCUUAUUAGUGAGAAGA--CAU--GGAAAAA------AUGGG--UAUUUAUUGAGC-----AAACACUAGGGGCUAGGGUUAUUAAUACCAAAUAUCAAAAUCUUACCAACCAGCCCUGUGUUUUCAG-UCACUUUUUUAGUGUGUUUU----UGCU---U------------------------------------------------------------------------UU----CUUUAAAUAAA----AAAA----- |
view | Chicken |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Lizard |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Frog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Zebrafish |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Stickleback |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Tetradon |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Fugu |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Medaka |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |