Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
GCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUU |
view | Chimp |
GCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUACAUCUUACAACUCACACAUUAACCAAAGAGGAAGGUCCCAUUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUU |
view | Rhesus |
GCUGUUCUUUAUGUCUUACAACUCGCACAUUUACCAAAGAGGAAGGUCCCAGUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUAUGUCUUACAACUCGCACAUUUACCAAAGAGGAAGGUCCCAGUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUUGCUGUUCUUUAUGUCUUACAACUCGCACAUUUACCAAAGAGGAAGGUCCCAGUACU-GCAGGGAUCUUAGCAGUACUGGGACCU-ACCUCUUUGGUACUUUCCC----CUGGGCC-------------CCCUU |
view | Bushbaby |
GCCGUUCUUCAUGGCUUACAGUAUGUACAUU--CUAAAGGGGUGGAGCUCGUUCAU-GCGGGGACCUCCGCAGC-CUGGGAGCU-GCCUCUGUGG--CUCGCCC----CUCCCCCGCCGCUU-CCCGUCCCGUGCCGUUCUUCAUGGCUUACAGUAUGUACAUU--CUAAAGGGGUGGAGCUCGUUCAU-GCGGGGACCUCCGCAGC-CUGGGAGCU-GCCUCUGUGG--CUCGCCC----CUCCCCCGCCGCUU-CCCGUCCCGUGCCGUUCUUCAUGGCUUACAGUAUGUACAUU--CUAAAGGGGUGGAGCUCGUUCAU-GCGGGGACCUCCGCAGC-CUGGGAGCU-GCCUCUGUGG--CUCGCCC----CUCCCCCGCCGCUU-CCCGUCCCGU |
view | Tree Shrew |
=============================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Horse |
=====================================AGGGAUGGAGCUUCUUAAUGGCAGGUAACUUAGCAGUACUAGGAAUUAACCUUUUUGGUACUUUCU-----CUCCUCCUGCUCCUCCCUUUCCCUU=====================================AGGGAUGGAGCUUCUUAAUGGCAGGUAACUUAGCAGUACUAGGAAUUAACCUUUUUGGUACUUUCU-----CUCCUCCUGCUCCUCCCUUUCCCUU=====================================AGGGAUGGAGCUUCUUAAUGGCAGGUAACUUAGCAGUACUAGGAAUUAACCUUUUUGGUACUUUCU-----CUCCUCCUGCUCCUCCCUUUCCCUU |
view | Armadillo |
=============================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Cat |
-----UUUUUAUGUCUUAUAACUCAUGAAUU--AUGA-GGGAUAGAGCUUCUUAAU-GCAAGGAUUUUAGCAGUACUAGGAAUU-ACCAAUUUGGUACCUUCUCUGUGCACCCCCCCCUCCCAACCCUCCCUU-----UUUUUAUGUCUUAUAACUCAUGAAUU--AUGA-GGGAUAGAGCUUCUUAAU-GCAAGGAUUUUAGCAGUACUAGGAAUU-ACCAAUUUGGUACCUUCUCUGUGCACCCCCCCCUCCCAACCCUCCCUU-----UUUUUAUGUCUUAUAACUCAUGAAUU--AUGA-GGGAUAGAGCUUCUUAAU-GCAAGGAUUUUAGCAGUACUAGGAAUU-ACCAAUUUGGUACCUUCUCUGUGCACCCCCCCCUCCCAACCCUCCCUU |
view | Dog |
------UUUUAUGUCUUGUAACUCAUGAAUU--CUGAAGGGAUGGAGUGUCUUAAC-AUAGGGAUCUUGGCAGCACUGGAAAUU-ACCAAUUUGGUACCUUCUCUGC-CCCCUCCCCCACCCACCCUUCCCUU------UUUUAUGUCUUGUAACUCAUGAAUU--CUGAAGGGAUGGAGUGUCUUAAC-AUAGGGAUCUUGGCAGCACUGGAAAUU-ACCAAUUUGGUACCUUCUCUGC-CCCCUCCCCCACCCACCCUUCCCUU------UUUUAUGUCUUGUAACUCAUGAAUU--CUGAAGGGAUGGAGUGUCUUAAC-AUAGGGAUCUUGGCAGCACUGGAAAUU-ACCAAUUUGGUACCUUCUCUGC-CCCCUCCCCCACCCACCCUUCCCUU |
view | Elephant |
=====================================GAGGAUGGAGCCUCUUAAU-GCAUUGAUCUUAAUAGUACUAAGAACU-GCGUAUUUGGUAUCUUC====================================================================GAGGAUGGAGCCUCUUAAU-GCAUUGAUCUUAAUAGUACUAAGAACU-GCGUAUUUGGUAUCUUC====================================================================GAGGAUGGAGCCUCUUAAU-GCAUUGAUCUUAAUAGUACUAAGAACU-GCGUAUUUGGUAUCUUC=============================== |
view | Cow |
=====================================AGGAAUGGAGCUUCACAAU-ACAGGGAUCUCAACAGCACUAGGAAUU-ACCCCUUGGGUGCCUCCACUCCUCCCCUCCCCUUCUCUCCCUUCCCUU=====================================AGGAAUGGAGCUUCACAAU-ACAGGGAUCUCAACAGCACUAGGAAUU-ACCCCUUGGGUGCCUCCACUCCUCCCCUCCCCUUCUCUCCCUUCCCUU=====================================AGGAAUGGAGCUUCACAAU-ACAGGGAUCUCAACAGCACUAGGAAUU-ACCCCUUGGGUGCCUCCACUCCUCCCCUCCCCUUCUCUCCCUUCCCUU |
view | Rabbit |
=============================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Guinea Pig |
=============================================================================================================================================================================================================================================================================================================================================================================================================== |
view | HedgeHog |
AUUA-UUUUUGUGUCUUGUAACUCACGAAUU--CUGAAAGGAUGG--------GAU------------------AUUAGCAACU-UCU---------CCCCCU-----GUCCCCCACCUUCCUGCCCUUCCUUAUUA-UUUUUGUGUCUUGUAACUCACGAAUU--CUGAAAGGAUGG--------GAU------------------AUUAGCAACU-UCU---------CCCCCU-----GUCCCCCACCUUCCUGCCCUUCCUUAUUA-UUUUUGUGUCUUGUAACUCACGAAUU--CUGAAAGGAUGG--------GAU------------------AUUAGCAACU-UCU---------CCCCCU-----GUCCCCCACCUUCCUGCCCUUCCUU |
view | Mouse |
=====================================-------------------------------AGCAGCACUAGGAGCU-AACUCUUAGGAA-----------AUAGGGC-------------UCUUU=====================================-------------------------------AGCAGCACUAGGAGCU-AACUCUUAGGAA-----------AUAGGGC-------------UCUUU=====================================-------------------------------AGCAGCACUAGGAGCU-AACUCUUAGGAA-----------AUAGGGC-------------UCUUU |
view | Shrew |
=============================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Rat |
GAAGUUUUACAU-------AACUCAUGCAUU---------------------------------UUUUAGCACCAUUAGAAAUG-AACUCUUAGGUA-----------ACAGGGC-------------UCUUUGAAGUUUUACAU-------AACUCAUGCAUU---------------------------------UUUUAGCACCAUUAGAAAUG-AACUCUUAGGUA-----------ACAGGGC-------------UCUUUGAAGUUUUACAU-------AACUCAUGCAUU---------------------------------UUUUAGCACCAUUAGAAAUG-AACUCUUAGGUA-----------ACAGGGC-------------UCUUU |
view | Tenrec |
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view | Opossum |
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view | Platypus |
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view | Chicken |
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view | Lizard |
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view | Frog |
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view | Zebrafish |
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view | Stickleback |
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view | Tetradon |
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view | Fugu |
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view | Medaka |
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