Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
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view | Human |
CGGCGCGCGCUCU------------------------------GCCCUGCGGGCAGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCCCGGCGCGCGCUCU------------------------------GCCCUGCGGGCAGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCCCGGCGCGCGCUCU------------------------------GCCCUGCGGGCAGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCCGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCC |
view | Chimp |
CGGCGCGCGCUCU------------------------------GCCCUGCGGGCGGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCUGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCCCGGCGCGCGCUCU------------------------------GCCCUGCGGGCGGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCUGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCCCGGCGCGCGCUCU------------------------------GCCCUGCGGGCGGCG-----GGUG---------------CCAG----------GCACGGUGUCAGCAGGCAACAUGGCUGAGAGGCCGGGGCCUCCGGGCGGCGCCGUGUCCGCGACCGCGUA-CCCUGACACCCCCGCGGAAUUCCCUCC |
view | Rhesus |
UGGCGCGCGCUCG------------------------------GUCCUGCUGGCGGCU-----GGCG---------------CCAG----------GCACGGUGGCAGCGGGCAACAUGGCCGAGAGGCCGCGGCCUCCCGGCGGCGCCGUGUCUGCGACCGCCUA-CCCCGACACCCCUGCGGAAUUCCCUCCUGGCGCGCGCUCG------------------------------GUCCUGCUGGCGGCU-----GGCG---------------CCAG----------GCACGGUGGCAGCGGGCAACAUGGCCGAGAGGCCGCGGCCUCCCGGCGGCGCCGUGUCUGCGACCGCCUA-CCCCGACACCCCUGCGGAAUUCCCUCCUGGCGCGCGCUCG------------------------------GUCCUGCUGGCGGCU-----GGCG---------------CCAG----------GCACGGUGGCAGCGGGCAACAUGGCCGAGAGGCCGCGGCCUCCCGGCGGCGCCGUGUCUGCGACCGCCUA-CCCCGACACCCCUGCGGAAUUCCCUCC |
view | Bushbaby |
GGGCUCUCGCUCUCGCUC-------------------------GGCCUGUGGGUAGCG-GGCCGGCA---------------CUCG----------GAGCGGUGGCGGCUGGCACCAUGGCCAUGAGGGUGCAGUCCCCGGGCGGCGCCGUGGCGGCGACCGC-UA-CCCUGACACCCGUGCCGAUUUUCCCCCGGGCUCUCGCUCUCGCUC-------------------------GGCCUGUGGGUAGCG-GGCCGGCA---------------CUCG----------GAGCGGUGGCGGCUGGCACCAUGGCCAUGAGGGUGCAGUCCCCGGGCGGCGCCGUGGCGGCGACCGC-UA-CCCUGACACCCGUGCCGAUUUUCCCCCGGGCUCUCGCUCUCGCUC-------------------------GGCCUGUGGGUAGCG-GGCCGGCA---------------CUCG----------GAGCGGUGGCGGCUGGCACCAUGGCCAUGAGGGUGCAGUCCCCGGGCGGCGCCGUGGCGGCGACCGC-UA-CCCUGACACCCGUGCCGAUUUUCCCCC |
view | Tree Shrew |
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view | Horse |
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view | Armadillo |
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view | Cat |
CGGCGCGCGCUCU------------------------------GGUCUGCCGGCUGCU-----GGUG---------------CCCCAAGGAACCGGGAGAGGUGGAAGCGAGCAACAUGGCCAAGAGGAUACAGUCCCCAGGAGGCGCCGUGUGCCCAGCCUCCUA-CCCAGACGCCCCCGCGGAGUUCCCCCCCGGCGCGCGCUCU------------------------------GGUCUGCCGGCUGCU-----GGUG---------------CCCCAAGGAACCGGGAGAGGUGGAAGCGAGCAACAUGGCCAAGAGGAUACAGUCCCCAGGAGGCGCCGUGUGCCCAGCCUCCUA-CCCAGACGCCCCCGCGGAGUUCCCCCCCGGCGCGCGCUCU------------------------------GGUCUGCCGGCUGCU-----GGUG---------------CCCCAAGGAACCGGGAGAGGUGGAAGCGAGCAACAUGGCCAAGAGGAUACAGUCCCCAGGAGGCGCCGUGUGCCCAGCCUCCUA-CCCAGACGCCCCCGCGGAGUUCCCCCC |
view | Dog |
CGGCGCGCGCUCU------------------------------GCCCUGCUGGUGGCG-----GGGG---------------CGCC--GGGCCCUGGAGAGACGGCGGCGGGCGCUAUGGCCGAGAGGCCGCAGCCCCCGGGCGGUGCCGUGUGCCCCGCCGCCUA-CCCCGACGCCGCCGCGGAGUUCCCCCCCGGCGCGCGCUCU------------------------------GCCCUGCUGGUGGCG-----GGGG---------------CGCC--GGGCCCUGGAGAGACGGCGGCGGGCGCUAUGGCCGAGAGGCCGCAGCCCCCGGGCGGUGCCGUGUGCCCCGCCGCCUA-CCCCGACGCCGCCGCGGAGUUCCCCCCCGGCGCGCGCUCU------------------------------GCCCUGCUGGUGGCG-----GGGG---------------CGCC--GGGCCCUGGAGAGACGGCGGCGGGCGCUAUGGCCGAGAGGCCGCAGCCCCCGGGCGGUGCCGUGUGCCCCGCCGCCUA-CCCCGACGCCGCCGCGGAGUUCCCCCC |
view | Elephant |
CGGCGCCUGCUGC------------------------------ACCCUGGCUGAGGCA-----GGCG-----AGGCCGGCGACCCG-----------GGCGUCGUCGGCUGACACCAUGGCUGGGAGGUCGCGGCCCCCGAGCGGUGCCGUGUGCGCGGCCGCCUA-CCCCGACACCCCUGCCGAAUGUCCCCCCGGCGCCUGCUGC------------------------------ACCCUGGCUGAGGCA-----GGCG-----AGGCCGGCGACCCG-----------GGCGUCGUCGGCUGACACCAUGGCUGGGAGGUCGCGGCCCCCGAGCGGUGCCGUGUGCGCGGCCGCCUA-CCCCGACACCCCUGCCGAAUGUCCCCCCGGCGCCUGCUGC------------------------------ACCCUGGCUGAGGCA-----GGCG-----AGGCCGGCGACCCG-----------GGCGUCGUCGGCUGACACCAUGGCUGGGAGGUCGCGGCCCCCGAGCGGUGCCGUGUGCGCGGCCGCCUA-CCCCGACACCCCUGCCGAAUGUCCCCC |
view | Cow |
UCGCGCGCCUCCG------------------------------GCCCAGCCGCUGGCU-----GGCA---------------CCCC----------GAGAGGUGGCUGCGAGCGCCAUGGCGGGAAGACCGCUGCCCGGAGGCGGAGGGGUGUGCGCCGCCGCCUA-CCCUAACACUUCUGCCGGAUUCCCCCCUCGCGCGCCUCCG------------------------------GCCCAGCCGCUGGCU-----GGCA---------------CCCC----------GAGAGGUGGCUGCGAGCGCCAUGGCGGGAAGACCGCUGCCCGGAGGCGGAGGGGUGUGCGCCGCCGCCUA-CCCUAACACUUCUGCCGGAUUCCCCCCUCGCGCGCCUCCG------------------------------GCCCAGCCGCUGGCU-----GGCA---------------CCCC----------GAGAGGUGGCUGCGAGCGCCAUGGCGGGAAGACCGCUGCCCGGAGGCGGAGGGGUGUGCGCCGCCGCCUA-CCCUAACACUUCUGCCGGAUUCCCCCC |
view | Rabbit |
CCGCCGGC----------------------------------------------------------G---------------CCGA----------GCA--GCGGCGGCCGGCACCAUGGCCGAGAAGCCGCGACUCCCGGGCGGCGCCGUGUCGGCCGCCGCCUA-CCCCGACGCCCCCGCCGAGUUCCCCCCCCGCCGGC----------------------------------------------------------G---------------CCGA----------GCA--GCGGCGGCCGGCACCAUGGCCGAGAAGCCGCGACUCCCGGGCGGCGCCGUGUCGGCCGCCGCCUA-CCCCGACGCCCCCGCCGAGUUCCCCCCCCGCCGGC----------------------------------------------------------G---------------CCGA----------GCA--GCGGCGGCCGGCACCAUGGCCGAGAAGCCGCGACUCCCGGGCGGCGCCGUGUCGGCCGCCGCCUA-CCCCGACGCCCCCGCCGAGUUCCCCCC |
view | Guinea Pig |
CAGCGU---------------------------------------CACGUGAGCGUCG-----CGUC---------------CCGG----------GCA-----GUCGCCGGCACCAUGGCUGCGACUCCGCUGCUCGCCGGCGGCGCCGUGGCCGCCACCGCUUA-CCCCGACACGCCGGCCGCGGUCCCCCCCAGCGU---------------------------------------CACGUGAGCGUCG-----CGUC---------------CCGG----------GCA-----GUCGCCGGCACCAUGGCUGCGACUCCGCUGCUCGCCGGCGGCGCCGUGGCCGCCACCGCUUA-CCCCGACACGCCGGCCGCGGUCCCCCCCAGCGU---------------------------------------CACGUGAGCGUCG-----CGUC---------------CCGG----------GCA-----GUCGCCGGCACCAUGGCUGCGACUCCGCUGCUCGCCGGCGGCGCCGUGGCCGCCACCGCUUA-CCCCGACACGCCGGCCGCGGUCCCCCC |
view | HedgeHog |
==============================================================================================================================GGCCCGCGU-----GAGGGCGCCGUGUACGCCUGCUGCUA-CCCCGAGGCGCACGCCGACUUCCCCCC==============================================================================================================================GGCCCGCGU-----GAGGGCGCCGUGUACGCCUGCUGCUA-CCCCGAGGCGCACGCCGACUUCCCCCC==============================================================================================================================GGCCCGCGU-----GAGGGCGCCGUGUACGCCUGCUGCUA-CCCCGAGGCGCACGCCGACUUCCCCCC |
view | Mouse |
========GCUCC-GCCCUAGCCGGGCUCACGGCGGGUGGCGGCGUGCGUGGCAGUCG---GCCGUG---------------GCGG----------GC------GCAGCGGGCCUCAUGGCGGCCGGUCCGCAGUCCUCGGGUGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC========GCUCC-GCCCUAGCCGGGCUCACGGCGGGUGGCGGCGUGCGUGGCAGUCG---GCCGUG---------------GCGG----------GC------GCAGCGGGCCUCAUGGCGGCCGGUCCGCAGUCCUCGGGUGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC========GCUCC-GCCCUAGCCGGGCUCACGGCGGGUGGCGGCGUGCGUGGCAGUCG---GCCGUG---------------GCGG----------GC------GCAGCGGGCCUCAUGGCGGCCGGUCCGCAGUCCUCGGGUGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC |
view | Shrew |
CGUUGCGCGCUCG------------------------------GCUCGGGCCUUGGCGGCGGCGGCG---------------UCCC-------------GGGUCUGCGCUCUCAGUAUGGCCGAGCGGCUAGUGUCC-CAGGCCGUGCGGUGGCCGCGCGCUGCUA-CCCCGAAGCUCACGCCGACUUCCCCGCCGUUGCGCGCUCG------------------------------GCUCGGGCCUUGGCGGCGGCGGCG---------------UCCC-------------GGGUCUGCGCUCUCAGUAUGGCCGAGCGGCUAGUGUCC-CAGGCCGUGCGGUGGCCGCGCGCUGCUA-CCCCGAAGCUCACGCCGACUUCCCCGCCGUUGCGCGCUCG------------------------------GCUCGGGCCUUGGCGGCGGCGGCG---------------UCCC-------------GGGUCUGCGCUCUCAGUAUGGCCGAGCGGCUAGUGUCC-CAGGCCGUGCGGUGGCCGCGCGCUGCUA-CCCCGAAGCUCACGCCGACUUCCCCGC |
view | Rat |
========-----------------------------------UGUGCGUAGCAGUCG---GCUGUG---------------GCGG----------GC------GCAGAGGGCCUCAUGGCGGCCCGGCCUCAGUCCUCGGGGGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC========-----------------------------------UGUGCGUAGCAGUCG---GCUGUG---------------GCGG----------GC------GCAGAGGGCCUCAUGGCGGCCCGGCCUCAGUCCUCGGGGGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC========-----------------------------------UGUGCGUAGCAGUCG---GCUGUG---------------GCGG----------GC------GCAGAGGGCCUCAUGGCGGCCCGGCCUCAGUCCUCGGGGGCCGCCGUGUCUGCGGCCGCUUA-CCCUGACUCACCCGUGGAGUUACCCGC |
view | Tenrec |
CAGCGCGCCCUCG------------------------------GUCCCGUCGCUGGCG-----GGCGCGGAAAGGCGGUCGAAGCG----------CGGCGUUGUCGGCGGACACCAUGGCUGGGAGGCCGCCGCCCCCGAGCGGCGCGGUGUGCGCGGCCGCCUA-CCCCGACACCCCCGCCGAGUUUCCCCCCAGCGCGCCCUCG------------------------------GUCCCGUCGCUGGCG-----GGCGCGGAAAGGCGGUCGAAGCG----------CGGCGUUGUCGGCGGACACCAUGGCUGGGAGGCCGCCGCCCCCGAGCGGCGCGGUGUGCGCGGCCGCCUA-CCCCGACACCCCCGCCGAGUUUCCCCCCAGCGCGCCCUCG------------------------------GUCCCGUCGCUGGCG-----GGCGCGGAAAGGCGGUCGAAGCG----------CGGCGUUGUCGGCGGACACCAUGGCUGGGAGGCCGCCGCCCCCGAGCGGCGCGGUGUGCGCGGCCGCCUA-CCCCGACACCCCCGCCGAGUUUCCCCC |
view | Opossum |
CGGCGCGU-------------------------------------------GGGCGUG-----GUUG---------------CCGA-----AGAAGGAGAAGCACAGGCAGGGACCCCGGGAAA--GGCCUCGGCUCCCG------GCUCAGGCACCGGCCCCAUAGCCCUCCCGCUCCCGC----UUCCGCUCCGGCGCGU-------------------------------------------GGGCGUG-----GUUG---------------CCGA-----AGAAGGAGAAGCACAGGCAGGGACCCCGGGAAA--GGCCUCGGCUCCCG------GCUCAGGCACCGGCCCCAUAGCCCUCCCGCUCCCGC----UUCCGCUCCGGCGCGU-------------------------------------------GGGCGUG-----GUUG---------------CCGA-----AGAAGGAGAAGCACAGGCAGGGACCCCGGGAAA--GGCCUCGGCUCCCG------GCUCAGGCACCGGCCCCAUAGCCCUCCCGCUCCCGC----UUCCGCUC |
view | Platypus |
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view | Chicken |
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view | Lizard |
====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Frog |
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view | Zebrafish |
====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Stickleback |
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view | Tetradon |
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view | Fugu |
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view | Medaka |
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