mir-553
chr1:100519365-100519472
View MI0003558 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human UCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAG
view Chimp UCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACUAUAACAUUCUUCAAUUUUAU---UUUAAA---------------ACGGUGAGAU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCGCUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAG
view Rhesus UCCUUCUAACGAUAACAUUCUUCAAUUUUAU---UUGAAA---------------AAGGUGAGGU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCACUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACGAUAACAUUCUUCAAUUUUAU---UUGAAA---------------AAGGUGAGGU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCACUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAGUCCUUCUAACGAUAACAUUCUUCAAUUUUAU---UUGAAA---------------AAGGUGAGGU-------U-UUGUUUUGUCU----------------------GAGAAAAUCUCACUG-UUUUAGACUGAGGCAGUGUGUUAUGAUAGAGAG
view Bushbaby ---UUCUAGCUAUAACAUUUUUUACUUGUAUAUAUCUAUAUCUCUAUCUAUCUCUACCAAAAGGU-------G-UGGUUUUGUCU----------------------GAGUGAAUCUUGCUG-UUU--------------------------AUAG---UUCUAGCUAUAACAUUUUUUACUUGUAUAUAUCUAUAUCUCUAUCUAUCUCUACCAAAAGGU-------G-UGGUUUUGUCU----------------------GAGUGAAUCUUGCUG-UUU--------------------------AUAG---UUCUAGCUAUAACAUUUUUUACUUGUAUAUAUCUAUAUCUCUAUCUAUCUCUACCAAAAGGU-------G-UGGUUUUGUCU----------------------GAGUGAAUCUUGCUG-UUU--------------------------AUAG
view Tree Shrew ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Horse ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Armadillo ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Cat ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Dog UCCUUCCAGCUAUAACAUUUUUUGAUCUUGU---AACAAA-----------------GGCGAGGU-------U-UUGUUCUGUUU------------------------GAGAGUCCUGGGA-CUUUAGAUGGAGGCAGUAUA---------====UCCUUCCAGCUAUAACAUUUUUUGAUCUUGU---AACAAA-----------------GGCGAGGU-------U-UUGUUCUGUUU------------------------GAGAGUCCUGGGA-CUUUAGAUGGAGGCAGUAUA---------====UCCUUCCAGCUAUAACAUUUUUUGAUCUUGU---AACAAA-----------------GGCGAGGU-------U-UUGUUCUGUUU------------------------GAGAGUCCUGGGA-CUUUAGAUGGAGGCAGUAUA---------====
view Elephant UCCUUCCAGCUGUAACAUUCUUUGAUCCUAU-----GAGA---------------AUGAUGAGGU-------UCUUGUUUUAUCU----------------------AAGAGAAUCUUGCC--UUUUAGAUGGCGGCAG-AUAGCAUAGUAGAGAGUCCUUCCAGCUGUAACAUUCUUUGAUCCUAU-----GAGA---------------AUGAUGAGGU-------UCUUGUUUUAUCU----------------------AAGAGAAUCUUGCC--UUUUAGAUGGCGGCAG-AUAGCAUAGUAGAGAGUCCUUCCAGCUGUAACAUUCUUUGAUCCUAU-----GAGA---------------AUGAUGAGGU-------UCUUGUUUUAUCU----------------------AAGAGAAUCUUGCC--UUUUAGAUGGCGGCAG-AUAGCAUAGUAGAGAG
view Cow UCCUUCCAGCUAUAACUUUCUUUAAUCCUGU---UGCAAA-----------------GGUGAGAUUUGACGGU-UUAUUUUAUUUUUUUUUUAUUUUUUUAUUUUUUGAAAAAAUCUUAGCAGUUUUAGAUAGAGGCAAUGUAUUAUAAC--AGAGUCCUUCCAGCUAUAACUUUCUUUAAUCCUGU---UGCAAA-----------------GGUGAGAUUUGACGGU-UUAUUUUAUUUUUUUUUUAUUUUUUUAUUUUUUGAAAAAAUCUUAGCAGUUUUAGAUAGAGGCAAUGUAUUAUAAC--AGAGUCCUUCCAGCUAUAACUUUCUUUAAUCCUGU---UGCAAA-----------------GGUGAGAUUUGACGGU-UUAUUUUAUUUUUUUUUUAUUUUUUUAUUUUUUGAAAAAAUCUUAGCAGUUUUAGAUAGAGGCAAUGUAUUAUAAC--AGAG
view Rabbit ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Guinea Pig ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view HedgeHog ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Mouse ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Shrew ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Rat ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Tenrec ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Opossum ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Platypus ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Chicken ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Lizard ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Frog ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Zebrafish ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Stickleback ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Tetradon ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Fugu ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================
view Medaka ====================================================================================================================================================================================================================================================================================================================================================================================================================================================================================

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