mir-550-1
chr7:30295945-30296353
View MI0003600 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human UGGCUGGUG---CAGU------------------------------------------------------------------------------------------------------------------GCCUGAGGGAGUAAGA-GCCCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGUUGUAAGAUAGUGUCUUACUCCCUCAGGCACAUCUCCAACAAG
view Chimp UGGCUGGUG---CAGU------------------------------------------------------------------------------------------------------------------GCCUGAGGGAGUAAGA-GCCCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGUUGUAAGAUAGUGUCUUACUCCCUCAGGCACAUCUCCAACAAG
view Rhesus UGGCUGGUG---CAGU------------------------------------------------------------------------------------------------------------------GCCUGAGGGAGUAAGA-GCCCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGUUGUAAGAUAGUGUCCUACUCCCUCAGGCACAUCUCCAGCAAG
view Bushbaby ==========================================================================================================================================================================================================================================================================================================================================================================================
view Tree Shrew UGGCUGCUG---UA--------------------------------------------------------------------------------------------------------------------GCCUAAGGGAGUAAGC-UCUCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUCUUACUAA------CUGCUACU-----------GUUUCCAGAAAG
view Horse UGGCUGCAAAGCCACU------------------------------------------------------------------------------------------------------------------------------AAGA-GUUCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUG--------------------------------UUACUAACAGA
view Armadillo ===========================================================================================================================================================================================================================================================================================================================================================================-AUAUGACCAUGUAA
view Cat UGGCUGUAAAGACAGU-----------------------------------------------------------------------------------------------------------------UGUU-------UCAUGA-AGGAU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGUG--------------------------------CCUCCAGCAAG
view Dog UAAUUGCAAAGCCAGU-----------------------------------------------------------------------------------------------------------------CAUC-------AUACUA-AAGAU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGUG--------------------------------CCUCCAGCAAG
view Elephant ==========================================================================================================================================================================================================================================================================================================================================================================================
view Cow UGACUGCAAAGCCAGUACAUGCUCCGUUGUUUUACUAACAGGUAGUGUCUCCAGCGGAGAAGGCAAUGGCACCCCACUCCAGUACUCUUGCCUAGAAAAUCCCAGGGGCGGAGGAGCCUGAUAGGCUGCUGUCCAUGGGGUCACGA-AGAGUCGGACAUGACUGAGCAACUUCACUCUCACUCUUCACUUUCAUGCAUUGGAGAGGGAAAUGGCAACCCACUCCAGUGUUCUUGCCUGGAGAAUCCCAGGGACGGGGGAGCCUGCUGGGCUGCCGUCUGUGGGGUUGCACAGAGUCGGACACGACUGAAGCGACUUAGCAGCAGCAGCAGCAGUG--------------------------------UCUCCAGCAAG
view Rabbit ===========================================================================================================================================================================================================================================================================================================================================================================CAUGUGUCCAGUGAG
view Guinea Pig GGGCUGCUG---UAGU------------------------------------------------------------------------------------------------------------------UCCUGCAACAGAGAGCUCCCCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AUUUUA--------------------------===============
view HedgeHog ==========================================================================================================================================================================================================================================================================================================================================================================================
view Mouse --------------------------------------------------------------------------------------------------------------------------------------------GAGAGC-CUUCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGUA--------------UGCUCACAUGGAC---UGCCUGCUGGA
view Shrew ==========================================================================================================================================================================================================================================================================================================================================================================================
view Rat -GGCUGGUG----------------------------------------------------------------------------------------------------------------------------------GGAGAGC-UGUCU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGUA--------------UGCUCACACAGG-----GCCUGCUGGA
view Tenrec ==========================================================================================================================================================================================================================================================================================================================================================================================
view Opossum ==========================================================================================================================================================================================================================================================================================================================================================================================
view Platypus ==========================================================================================================================================================================================================================================================================================================================================================================================
view Chicken ==========================================================================================================================================================================================================================================================================================================================================================================================
view Lizard ==========================================================================================================================================================================================================================================================================================================================================================================================
view Frog ==========================================================================================================================================================================================================================================================================================================================================================================================
view Zebrafish ==========================================================================================================================================================================================================================================================================================================================================================================================
view Stickleback ==========================================================================================================================================================================================================================================================================================================================================================================================
view Tetradon ==========================================================================================================================================================================================================================================================================================================================================================================================
view Fugu ==========================================================================================================================================================================================================================================================================================================================================================================================
view Medaka ==========================================================================================================================================================================================================================================================================================================================================================================================

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