Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
UCCUGGGCUGUCUCAGAGCCUG-------GAG----U--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----CAUAC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGCUCUUG-------------GC-------------------------------CA-------UGCUG----------------------------------------------UGCC |
| view | Chimp |
UCCUGGGCUGUCUCAGAGCCUG-------GAG----U--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----CAUAC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGCUCUUG-------------GC-------------------------------CA-------UGCUG----------------------------------------------UGCC |
| view | Rhesus |
UCCUGGGCUGUCUCAAAGCCUG-------GAG----C--GG-GGGG-GCC===================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Bushbaby |
UCCUGGGCCGUCUCAGAGCCUG-------GAG----C--AG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----UGUAU-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GCCCC--------------------C-UGUUCUCA---------------------------------------------------------CAG----------------------------------------------UGCU |
| view | Tree Shrew |
UCCUGGGCCGUUUCGGAGCCUG-------GAG----C--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------GAA----------GCC-----UGUAU-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------A--GUUCCCA-------------CC-------------------------------CA---------CUA----------------------------------------------UGCC |
| view | Horse |
UCCUGGGCUGUUUCGGAGCCUG-------GAG----C--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----UGUGC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGUUCCCA-------------GA-------------------------------CA-------CAUUG----------------------------------------------UUCC |
| view | Armadillo |
======================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Cat |
UCCUGGGCUGUUUCGGAGCCUG-------GAG----C--AG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----UGUGC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-CGUUCCUG-------------GA-------------------------------CA-------CGCUG----------------------------------------------UGCC |
| view | Dog |
UCCUGGGCUGUUUCGGAGCCUG-------GAG----C--AG-GGGG-GCAGG-A----AGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----UGUGC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-CGUUCCCA-------------GA-------------------------------CA-------CGCUG----------------------------------------------UGCC |
| view | Elephant |
======================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Cow |
UCCUGGGCUGUUUCGGAGCCUG-------GAG----C--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AUA----------GUG-----UGUGC-----UGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGUUCCUG-------------AA-------------------------------CA-------CGCUG----------------------------------------------UGCC |
| view | Rabbit |
UCCUGGGCUGUCUCAGAACCUG-------GAG----C--GG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------A-G-----UGUGC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC----------------------UGUUUCCA-------------GA-------------------------------CU-------CACUG----------------------------------------------UGCC |
| view | Guinea Pig |
UCCUGGGCUGUCUCAGAGCC-G-------GAG----U--AG-GGAG-GCAGG-A----GUG------------GC-------------------------------UCAGGGAG--------AAA----------GCG-----UGUAA-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUUCUGUCCC--------------------C-UGUCCCUG-------------GA-------------------------------CA-------CACUG----------------------------------------------UGCC |
| view | HedgeHog |
UCCUGCGCUGUUUCAGAGCCUG-------GAG----C--AG-AGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUG-----UAUGU-----CACC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GCCCC--------------------C-UGUUUCUA-------------GA-------------------------------CA-------CACCA----------------------------------------------UGCC |
| view | Mouse |
UCCUGGGCUGUCUCGGAGCCUG-------GGG----C--AG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GUA-----UCUAC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGUCCCCA-------------AG-------------------------------UA-------CACUG----------------------------------------------GACC |
| view | Shrew |
UCCUGGGCCGUUUCAGAGCCUG-------AAG----U--GG-GGGGAGCAGG-GUGGGGGA------------GC-------------------------------UCAGGGAG--------AAU----------GUG-----UGCAC-----GGCC----UCU---------------------------------------GGGCCG------------------------CU-------------CAG-------------CCC------UUCC-GUCCC--------------------C-CGUUUCUG-------------GA-------------------------------CC-------GGCCG----------------------------------------------GGCC |
| view | Rat |
UCCUGGGCGGUCUCGGAGCCUG-------GGG----C--AG-GGGG-GCAGG-A----GGG------------GC-------------------------------UCAGGGAG--------AAA----------GCA-----UCUAC-----AGCC----CCU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GUCCC--------------------C-UGUCCCCA-------------AA-------------------------------UA-------CACCA----------------------------------------------GAUC |
| view | Tenrec |
UCCUGGGCCGUCUCGGAGCCUGAGGCGGAGGG----C--GG-GGAG-GCAGU-A----GGG------------GC-------------------------------UCAGGGGG--------A------------GUG-----UGUGC-----AGCC-----CU---------------------------------------GGCCCU------------------------CU-------------CUG-------------CCC------UUCC-GCCCC--------------------C-CGGCCCCG-------------CC-------------------------------CCGCGCUACCGCUA----------------------------------------------CCCC |
| view | Opossum |
UCCUGGGCGGUCUCGGAGCCUC------------------G-GGGG-GCAGA-A----GGGCUUAUUGUUCGAGC-------------------------------UCUCUGGC--------CAG----------GCG-----GCUGCCCCGGAGCC----CCUUCCCGAGAUGGCCCGGCCUGGGGUGAGGUCUGGGACGGGGGUCCA------------------------CC-------------CUGGGAAGACGAGGCGCCCCGCGGGUGCC-CCUCC--------------------C-UGCCCUCG-------------GG-------------------------------CA------AUGCCA----------------------------------------------ACCC |
| view | Platypus |
UCCUGGGCUGUCUCUGAGUCUA-------AAGGGGCC--AA-AGAG-ACAGA-A----ACG------------GA-------------------------------UCAGUGAGGGCAGAGAAAA----------GGA-----CCUAC-----CACC----CCA---------------------------------------AGACCUGGGGGAAGGGAUCAGGGCAGGCACCU-------------CAG-------------GACCGUGG-CUCC-CAACC--------------------C-AGCUCUCG-------------GGGCAAAGACAAACAGAAAUGGGGUGAAGGGGUCA-------CUCUGGGGUCUGAGGAAAAUGGGGGCCCCAACCCUAGUGGGGAAGUUCAGGUGCA |
| view | Chicken |
GCCUGAGCUGUCUCCGAGCCUG-------CGG----U--GAGAAGG-ACAGA-U----GAU------------GCCACACUCCCAUUUUGCUGUACAACUGCAGUAUCCAGGAG--------AAC----------CUGGACAUCGCAC-----AGCC----CUU---------------------------------------CCCCAG------------------------CUGUCAGCCGUGGCACAG-------------CCC------CUCA-GCCAC--------------------A-CGUCCCCACCGCUGGGAUGGUGC-------------------------------AG-------GGCUG----------------------------------------------GGCA |
| view | Lizard |
GCCUGGGCGGUCUCAGAGCCUG-------UAG----U--AA-AGGA-GCA===================================================================================================================================================================================================================================================================================================================================================================================== |
| view | Frog |
UUCUGCCCAGUCUCUGAUGCUA-------AAA----A--AA-CAAA-ACA---------------------------------------------------------UGUGGAA--------AUA----------GUA-----UUUAC-----AACC========================================================================================================================================================================================================================================================================== |
| view | Zebrafish |
UCUGAGCCCGUCUCAGAGGCUA------GAGA----G--AG-GAGU-A--AAUA----ACA------------GC-------------------------------UAAUAAAC--------AAA==============================================================================================================================================================CAUUGUCACC-AUCUCCAACA-UGUGU----------------------------------------------------------------------------------------------------------------- |
| view | Stickleback |
UCGCUGCCCGUCUCCGAGGCUG------CGAA----C--GG-AGGA-A--GG-A----ACC------------GA-------------------------------UGAGAGGG--------AG-----------G---------------------ACUGAAG---------------------------------------AGAGCA------------------------AA-------------GUG-------------A-CAGACAG----------C--CGACGCC-ACGAGGACCCGAGGAC----------------------------------------------------------------------------------------------------------------- |
| view | Tetradon |
UCGGAUCCCGUCUCCGAGGCUG------UCGG----CGGAG-GGGC-G--GA-A----GCG------------CG-------------------------------UUACAGGA--------UGCCCCGUUUAGCG---------------------GUUUGCG---------------------------------------UGCCCC------------------------CC-------------CUA-------------CCCCGCCAC----------C--CG------GCGGGGUAAA-GGCCC----------------------------------------------------------------------------------------------------------------- |
| view | Fugu |
UCCGAUCCCGUCUCCGAGGCUG------CGGA----C--AG-GGGC-------A----ACG------------CG-------------------------------AGGGGGGG--------GGGGUCACAUCAAG---------------------GCUUUCA---------------------------------------GGCCGU----------------------------------------UA-------------AACGGGCAG----------C--UG------AUCAGGACAC-GGCUC----------------------------------------------------------------------------------------------------------------- |
| view | Medaka |
UCAGAUCCCGUCUCUGAUGCUG----UUCCAA----C--AG-AAAA-A--AC-A----AAC------------AU-------------------------------AGACG--------------================================-UUGGCG---------------------------------------UUUCCU------------------------CU-------------GUG-------------------CAG----------CAUCGGCGUUGAUGGUGACGC-AGGCC----------------------------------------------------------------------------------------------------------------- |
