Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
UGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCA |
| view | Chimp |
UGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCA |
| view | Rhesus |
UGGCCCUGACCCGCUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGGCCCUGACCCGCUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGGCCCUGACCCGCUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCA |
| view | Bushbaby |
UGGCCCCAACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCCAACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCCAACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCA |
| view | Tree Shrew |
UGGCC-UGGCCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCAUGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCCAUCAACCAUGGCC-UGGCCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCAUGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCCAUCAACCAUGGCC-UGGCCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCAUGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACCCAUCAACCA |
| view | Horse |
UGGCCCUUACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GACGAUCAUGGCCCUUACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GACGAUCAUGGCCCUUACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GACGAUCA |
| view | Armadillo |
============================================================================================================================================================================================================================================================================================================================================================================== |
| view | Cat |
UGGCCCUGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCAUGGCCCUGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCAUGGCCCUGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCA |
| view | Dog |
UGGCCCCGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCAUGGCCCCGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCAUGGCCCCGACUCACUUCCUGUGACGCAUGAGCUU--UUGGCUCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUUCC-AUCGAUCA |
| view | Elephant |
UGGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-AUCGAUCA |
| view | Cow |
UGGCCCCAACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GCCGAUCAUGGCCCCAACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GCCGAUCAUGGCCCCAACUCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GCCGAUCA |
| view | Rabbit |
UAGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUAGCCCGGGUUAUACGU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUGAUAGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUAGCCCGGGUUAUACGU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUGAUAGCCCUGACCCACUUCCUGUGACAGGCGAGCUU--UUAGCCCGGGUUAUACGU---------GAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUGA |
| view | Guinea Pig |
UGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCACUC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCACUC-AUCGAUCAUGGCCCUGACCCACUUCCUGUGACGGGCGAGCUU--UUGGCCCGGGUUAUACCU---------AAUGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCACUC-AUCGAUCA |
| view | HedgeHog |
============================================================================================================================================================================================================================================================================================================================================================================== |
| view | Mouse |
UGGCCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACACUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-AUCAUGCAUGGCCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACACUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-AUCAUGCAUGGCCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACACUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-AUCAUGCA |
| view | Shrew |
UGGCCCUGAUUCACUUCCUGUGACGGGCGAGCAUAUUUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAA=================================UGGCCCUGAUUCACUUCCUGUGACGGGCGAGCAUAUUUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAA=================================UGGCCCUGAUUCACUUCCUGUGACGGGCGAGCAUAUUUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAA================================= |
| view | Rat |
UGACCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACUCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GUCUCUCAUGACCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACUCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GUCUCUCAUGACCCUUGCUUACUUCCUUUGACGGGUGAGCUU--UUGGCCCGGGUUAUACCU---------GACUCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUAUC-GUCUCUCA |
| view | Tenrec |
UGCACCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGCACCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCAUGCACCUGACCCACUUCCUGUGACAGGCGAGCUU--UUGGCCCGGGUUAUACCU---------GACGCUCACGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCUACC-GUCGAUCA |
| view | Opossum |
UGGCCCUAGCCCACUUCCUGUGACAGGUGAGCUU--UUGGUCCGGGUUAUACCU---------GAUGCAUGUGUAUAAGACGAGCAAAAAGCUCGUUGGUCGGAGGAUCCAUC-AUCG----UGGCCCUAGCCCACUUCCUGUGACAGGUGAGCUU--UUGGUCCGGGUUAUACCU---------GAUGCAUGUGUAUAAGACGAGCAAAAAGCUCGUUGGUCGGAGGAUCCAUC-AUCG----UGGCCCUAGCCCACUUCCUGUGACAGGUGAGCUU--UUGGUCCGGGUUAUACCU---------GAUGCAUGUGUAUAAGACGAGCAAAAAGCUCGUUGGUCGGAGGAUCCAUC-AUCG---- |
| view | Platypus |
UGGCCCUGGACCACUUCCUGUGACAGACAAGCUU--UUGGCCCAGAUUAUACCU---------GACAUUCCCGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCCACC-AUCGACC-UGGCCCUGGACCACUUCCUGUGACAGACAAGCUU--UUGGCCCAGAUUAUACCU---------GACAUUCCCGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCCACC-AUCGACC-UGGCCCUGGACCACUUCCUGUGACAGACAAGCUU--UUGGCCCAGAUUAUACCU---------GACAUUCCCGUAUAAGACGAGCAAAAAGCUUGUUGGUCAGAGGAGCCACC-AUCGACC- |
| view | Chicken |
============================================================================================================================================================================================================================================================================================================================================================================== |
| view | Lizard |
UGAAU---------UUCCUCUAACAAGGAAGCUU--UUGGCUCGGGUUAUAUUUUAG------AAUGGCAGUGUAUAAGACGAGCAAAAAGCUUGUUGGUUGGAGGAG--------------UGAAU---------UUCCUCUAACAAGGAAGCUU--UUGGCUCGGGUUAUAUUUUAG------AAUGGCAGUGUAUAAGACGAGCAAAAAGCUUGUUGGUUGGAGGAG--------------UGAAU---------UUCCUCUAACAAGGAAGCUU--UUGGCUCGGGUUAUAUUUUAG------AAUGGCAGUGUAUAAGACGAGCAAAAAGCUUGUUGGUUGGAGGAG-------------- |
| view | Frog |
==============UCCUUUCAACAGGCAAGCUU--UUUGCUUGGAUUAUGUUU---------UCUGUUGUUGUAUAAGACGAGCAUAAAGCUUGUUUGUUAGAAGGCUGUGC-UUCGCCCU==============UCCUUUCAACAGGCAAGCUU--UUUGCUUGGAUUAUGUUU---------UCUGUUGUUGUAUAAGACGAGCAUAAAGCUUGUUUGUUAGAAGGCUGUGC-UUCGCCCU==============UCCUUUCAACAGGCAAGCUU--UUUGCUUGGAUUAUGUUU---------UCUGUUGUUGUAUAAGACGAGCAUAAAGCUUGUUUGUUAGAAGGCUGUGC-UUCGCCCU |
| view | Zebrafish |
==============------UGACAGAGAAGCUU--UUUGUUUGUGUU---------------UAUUUUCAAAUGUAAGACGAACAAAAAGUUUUUCUGUUAGUAGGCCAAGC-UUC-----==============------UGACAGAGAAGCUU--UUUGUUUGUGUU---------------UAUUUUCAAAUGUAAGACGAACAAAAAGUUUUUCUGUUAGUAGGCCAAGC-UUC-----==============------UGACAGAGAAGCUU--UUUGUUUGUGUU---------------UAUUUUCAAAUGUAAGACGAACAAAAAGUUUUUCUGUUAGUAGGCCAAGC-UUC----- |
| view | Stickleback |
AAACAU--------UUCUCCUAACGCA------------------GUAGGAGGCCCAGGAUCAGAGGGAAGAGCUAGAGAGGAGCAACAAG-----------------------CUGCUCCGAAACAU--------UUCUCCUAACGCA------------------GUAGGAGGCCCAGGAUCAGAGGGAAGAGCUAGAGAGGAGCAACAAG-----------------------CUGCUCCGAAACAU--------UUCUCCUAACGCA------------------GUAGGAGGCCCAGGAUCAGAGGGAAGAGCUAGAGAGGAGCAACAAG-----------------------CUGCUCCG |
| view | Tetradon |
UGACAC--------CUCCUGUGCAGGACCUGCAG--CAGGAGGA-GCUGCAGGA---------GCUGCUCCAGGAGGAGACGCGCCAAAAGCUGUCCCUCU-------------------CGUGACAC--------CUCCUGUGCAGGACCUGCAG--CAGGAGGA-GCUGCAGGA---------GCUGCUCCAGGAGGAGACGCGCCAAAAGCUGUCCCUCU-------------------CGUGACAC--------CUCCUGUGCAGGACCUGCAG--CAGGAGGA-GCUGCAGGA---------GCUGCUCCAGGAGGAGACGCGCCAAAAGCUGUCCCUCU-------------------CG |
| view | Fugu |
--ACAC--------UUCGUCUAGCAGAUCAGCUU--UUUGUUUGUGUUCCAA---------------CUAAAAUGUAAGACGAACAAAAAGUUUGUCUGUUAGGUGAGC--------GAGCA--ACAC--------UUCGUCUAGCAGAUCAGCUU--UUUGUUUGUGUUCCAA---------------CUAAAAUGUAAGACGAACAAAAAGUUUGUCUGUUAGGUGAGC--------GAGCA--ACAC--------UUCGUCUAGCAGAUCAGCUU--UUUGUUUGUGUUCCAA---------------CUAAAAUGUAAGACGAACAAAAAGUUUGUCUGUUAGGUGAGC--------GAGCA |
| view | Medaka |
AACCGU--------UCCAACAGACGGA------------------GUUGGAGGAUGCGGA---GAGGAAAGGGAUCAAGCUGGCCAAAGACGUCUCUG------------------------AACCGU--------UCCAACAGACGGA------------------GUUGGAGGAUGCGGA---GAGGAAAGGGAUCAAGCUGGCCAAAGACGUCUCUG------------------------AACCGU--------UCCAACAGACGGA------------------GUUGGAGGAUGCGGA---GAGGAAAGGGAUCAAGCUGGCCAAAGACGUCUCUG------------------------ |
