mir-1539
chr18:45267721-45267810
View MI0007260 at mirBase
 

  ▼▲   Show/Hide Alignment

Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

Species Sequence
view Human GG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GAAAGUCCUGCGCGUCCCAG------------AUGCCCAACUAAAAGCUUCG-----------CUGCGGGG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GAAAGUCCUGCGCGUCCCAG------------AUGCCCAACUAAAAGCUUCG-----------CUGCGGGG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GAAAGUCCUGCGCGUCCCAG------------AUGCCCAACUAAAAGCUUCG-----------CUGCGG
view Chimp GG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GCAAGUCCUGCGCGUCCCAG------------GUGCCCAACUCAAAGCUCCG-----------CUGCGGGG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GCAAGUCCUGCGCGUCCCAG------------GUGCCCAACUCAAAGCUCCG-----------CUGCGGGG-GGCGC-----GGCGAGGCUUCCGGCUCUGCG---GCCUGCAGGUAGCGC----GCAAGUCCUGCGCGUCCCAG------------GUGCCCAACUCAAAGCUCCG-----------CUGCGG
view Rhesus GG-GAUGG-----GGCAGGACUUCCGGCUCUGCG---UCCUGCAGGUAACGC----GCAAGUCCUGCAUCUCCCAG------------GUACCCAACUGAAAGCUCCG-----------CUCCGGGG-GAUGG-----GGCAGGACUUCCGGCUCUGCG---UCCUGCAGGUAACGC----GCAAGUCCUGCAUCUCCCAG------------GUACCCAACUGAAAGCUCCG-----------CUCCGGGG-GAUGG-----GGCAGGACUUCCGGCUCUGCG---UCCUGCAGGUAACGC----GCAAGUCCUGCAUCUCCCAG------------GUACCCAACUGAAAGCUCCG-----------CUCCGG
view Bushbaby =======================================================================================================================================================================================================================================================================================================================================================================================
view Tree Shrew =======================================================================================================================================================================================================================================================================================================================================================================================
view Horse GG-GGCCC-----GGCGCGGCUUCCGGCGCGGCA---GCC----GUUGG-----------------------------------------------CUCAGAGC---------------CUGCGGGG-GGCCC-----GGCGCGGCUUCCGGCGCGGCA---GCC----GUUGG-----------------------------------------------CUCAGAGC---------------CUGCGGGG-GGCCC-----GGCGCGGCUUCCGGCGCGGCA---GCC----GUUGG-----------------------------------------------CUCAGAGC---------------CUGCGG
view Armadillo ---GGAAG--GGACGACACAACUCUCGC-CUGCG-----C---------------UUCCGGUACUGCAGACCUAAGCUUAAAGCCUUUACGCCCCGCUGAAAACCCGGCCAUCAGCGAUCCCCGU---GGAAG--GGACGACACAACUCUCGC-CUGCG-----C---------------UUCCGGUACUGCAGACCUAAGCUUAAAGCCUUUACGCCCCGCUGAAAACCCGGCCAUCAGCGAUCCCCGU---GGAAG--GGACGACACAACUCUCGC-CUGCG-----C---------------UUCCGGUACUGCAGACCUAAGCUUAAAGCCUUUACGCCCCGCUGAAAACCCGGCCAUCAGCGAUCCCCGU
view Cat =======================================================================================================================================================================================================================================================================================================================================================================================
view Dog GGAGGCGC-----GGGCUGGCUUCCGGCGCGGCC---GCC----GUGAG-----------------------------------------------CUCAGAGC---------------CCGCGGGGAGGCGC-----GGGCUGGCUUCCGGCGCGGCC---GCC----GUGAG-----------------------------------------------CUCAGAGC---------------CCGCGGGGAGGCGC-----GGGCUGGCUUCCGGCGCGGCC---GCC----GUGAG-----------------------------------------------CUCAGAGC---------------CCGCGG
view Elephant =======================================================================================================================================================================================================================================================================================================================================================================================
view Cow GG-GGCGU-----GG-ACGACUUCCGGCGCGGCCGCAGCC----GUCAG-----------------------------------------------UC--GAGC---------------CUGCAGGG-GGCGU-----GG-ACGACUUCCGGCGCGGCCGCAGCC----GUCAG-----------------------------------------------UC--GAGC---------------CUGCAGGG-GGCGU-----GG-ACGACUUCCGGCGCGGCCGCAGCC----GUCAG-----------------------------------------------UC--GAGC---------------CUGCAG
view Rabbit UG-GGCGGGCGC-GGCGGCGCUGCGGGGCGCCCG-----GCGGAGCGGGCCGGGG-AGAGGCCCUCCGCGACGCAG------------=====================================UG-GGCGGGCGC-GGCGGCGCUGCGGGGCGCCCG-----GCGGAGCGGGCCGGGG-AGAGGCCCUCCGCGACGCAG------------=====================================UG-GGCGGGCGC-GGCGGCGCUGCGGGGCGCCCG-----GCGGAGCGGGCCGGGG-AGAGGCCCUCCGCGACGCAG------------=====================================
view Guinea Pig ---GGCGGG-GC----------------------------=====================================================================================---GGCGGG-GC----------------------------=====================================================================================---GGCGGG-GC----------------------------=====================================================================================
view HedgeHog =======================================================================================================================================================================================================================================================================================================================================================================================
view Mouse -----CAGG-GCUCGCCGCACUUCCGGAGCUGCG-----CUGUAGUCAGCGCCCGGGCCGGCCCUUCC---------------------UGGCUAGCAAAGGGUGCCG-----------CUGUGU-----CAGG-GCUCGCCGCACUUCCGGAGCUGCG-----CUGUAGUCAGCGCCCGGGCCGGCCCUUCC---------------------UGGCUAGCAAAGGGUGCCG-----------CUGUGU-----CAGG-GCUCGCCGCACUUCCGGAGCUGCG-----CUGUAGUCAGCGCCCGGGCCGGCCCUUCC---------------------UGGCUAGCAAAGGGUGCCG-----------CUGUGU
view Shrew GG-GGCGG-----GA-----CUUCCGGGGCCGCA---GCC=====================================================================================GG-GGCGG-----GA-----CUUCCGGGGCCGCA---GCC=====================================================================================GG-GGCGG-----GA-----CUUCCGGGGCCGCA---GCC=====================================================================================
view Rat -----CAGA-GCUCAUGACACUUCCGGAGCUGCG-----CUGUAGUCAGCGC------------------------------------=====================================-----CAGA-GCUCAUGACACUUCCGGAGCUGCG-----CUGUAGUCAGCGC------------------------------------=====================================-----CAGA-GCUCAUGACACUUCCGGAGCUGCG-----CUGUAGUCAGCGC------------------------------------=====================================
view Tenrec ---GG---------GCUGCACUUCCGGCGCUGCG------=====================================================================================---GG---------GCUGCACUUCCGGCGCUGCG------=====================================================================================---GG---------GCUGCACUUCCGGCGCUGCG------=====================================================================================
view Opossum =======================================================================================================================================================================================================================================================================================================================================================================================
view Platypus =======================================================================================================================================================================================================================================================================================================================================================================================
view Chicken =======================================================================================================================================================================================================================================================================================================================================================================================
view Lizard =======================================================================================================================================================================================================================================================================================================================================================================================
view Frog =======================================================================================================================================================================================================================================================================================================================================================================================
view Zebrafish =======================================================================================================================================================================================================================================================================================================================================================================================
view Stickleback =======================================================================================================================================================================================================================================================================================================================================================================================
view Tetradon =======================================================================================================================================================================================================================================================================================================================================================================================
view Fugu =======================================================================================================================================================================================================================================================================================================================================================================================
view Medaka =======================================================================================================================================================================================================================================================================================================================================================================================

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