Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
UCU---------------------GAUU-------GUUAG-------A-----C----A----------------------UUA-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGACACUAGGACCAU--GUCUUGGUUUUUGCAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-AGCACUAGAUU-----GUAAA---GACUGGGG |
| view | Chimp |
UCU---------------------GAUU-------GUUAG-------A-----C----A----------------------UUA-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGACACUAGGACCAU--GUCUUGGUUUUUGCAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-AGCACUAGAUU-----GUAAA---GACUGGGG |
| view | Rhesus |
-CU---------------------GAUU-------GUUAG-------A-----C----A----------------------UUA-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGACACUAGGACUAU--GUCUUGGUUUUUGCAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-AGCACUAGAUU-----GUAAA---GACUGGGA |
| view | Bushbaby |
================================================================================================================================================================================================================================================ |
| view | Tree Shrew |
CUU---------------------AAUU-------GCAAA-------A-----C----AUAAGUG--------UCUACU--UUG-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUAUAGAAACUAGGACUGU--GUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAGA--AAAA--C-UGCACUAGAU====================== |
| view | Horse |
UUU---------------------GUUAAAC----AUUAA-------AAUG-UU----AGCCA------------------GAU-UU---UAUC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACUAGGAUCAC--UUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUGA--C-UGCACUAGAUU-----GUAAA---GACUGGGG |
| view | Armadillo |
--U---------------------GCUA-------GUUAA-------A-----C----AUGAAAC--------UAGCCAGAUUU-CC---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACUAAGAUUAU--UUCUUAGUUUCUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-UGCACUAGAU-U----GUAAA---GACUGGGG |
| view | Cat |
UCU---------------------AAUUACUAGACAUUAA-------GAUG--U----AGCUU------------------UUU-UU---UAAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGAACCUAAGAUUGU----CUUAGUUUCUGUAGUAAUGCUAGC==================================================================== |
| view | Dog |
UCU---------------------AAUUACU----AUUAA-------AUUU--U----GGUUU------------------UUUAUU---UAAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACUAGGAUUGC----CUUAGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-UGCACUGGAUU-----GUAGA---GACUGGGG |
| view | Elephant |
UUU---------------------AAUG-------GUUAA-------A-----C----AUAAAGAAA----AUUAGCCCA---U-UU---UUUC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGAAACGAGGACUGU--GUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAGGAAGAAAA--GUAA--C-UGCACUAGAU-C----GGAAA---GACUGGGG |
| view | Cow |
UGU---------------------AAUU-------GUUAA-------AAUAAAA----AGUUA------------------GGU-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGAAACCAAGAUAGC----CUUGGUUUUUGUAAUAAUGCUAGCAGAGU----AUUACACAAGAAGAAGA--GGAA--C-UGCACUAGAUU-----GUAAA---GACUGGGG |
| view | Rabbit |
-U----------------------AUCU-------GUUAA-------A-----C----AUAAAAA--------UGUA----CAC-UU---UAAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACUAGGACCAU--GUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAGA--GUAA--C-UGCACUAGAUU-----GUAAA---GACUGGGG |
| view | Guinea Pig |
-UG---------------------AUUA-------GUUAG-------A-----A----AUACAGC--------UA-------GA-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACUAGGAUCAU--GUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-UGCACUAGACC-----CUAAA---GACUGGGG |
| view | HedgeHog |
UCU---------------------AGUU-------AUUAA-------AGUG--U----AGGAA------------------UUA-UU----UGC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGAAACUUUGAUUUC--AUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GU-A--C-UGCACUAAAUUA----GAAAA---GACUAGGG |
| view | Mouse |
-UUGUUACAAG-------------CUUU-------UUUUU-------U-----U-----------------------------U-UU---UCAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGGAACUAAGAUUCU--AUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-UGCACUGGAUU-----GCAAA---GACUGGGG |
| view | Shrew |
CCU---------------------AAUC-------AUUAAGCUUGAGAGUG--UAACCAGAUA------------------CUU-UUGCCCUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUGCAGAAACCAGGAAUAC--AUCUUGGUUUUUGCAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAAA--GUAA--C-UGCACUAGAUU-----GAAUU---GACUGGGG |
| view | Rat |
-UU---------------------CUUU-------AUUAA-------A-----U----GUAAGG------------------GU-UU---UUAC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGGAACUAGGAUUAU--AUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAAGAAGAAGA--GUAA--C-UGCACUGGAUU-----CCAAA---GACUGGGG |
| view | Tenrec |
--U---------------------AAUU-------GAUAA-------C-----C----AUAAGCA-----------CCCAGAUU-UU---UUUC-CUUCUUGUA--U--AAGCACUGUGCUAAAAUUACAGAAACUGGGGCACU--GUCUUGGUUUUUGUAAUAAUGCUAGCAGAGU----A-CACACAGGAAGGAAAUUGAAA--C-UGCACCCGGU-CU---GGAAA---GACUGGGG |
| view | Opossum |
ACC---------------------UGUG-------AUGGA-------AUUA--U----GAUGGAACAUAAUUUUAAUGCAAGGC-UU---GUAC-CUUCUUGUU--UCAAAGCACUGUGCUAAAAUUGCAAAAAUUAAGGCAAU--GCCUUGGUCUUUGUAAUAAUGCUAGCACAGU----A-UAUACAAGAAGAAGA--ACAA--A-UGCACUAGAU--CGA-AAAAA---GACUUGGG |
| view | Platypus |
================================================================================================================================================================================================================================================ |
| view | Chicken |
--------UGGUAUCCGUUACACCUGUG-------AUGGG-------A-----G----AGUUCAG----------------AAA-UG---UUAC-CUUCUUGUC--A--AAGCACUGUGCUAAAAUUACAGAAGCUGAGGCUGA--GCUUUGGGUUCUGUAAUAAUGCUAGUAGAGU----A-CACGCAAGAAGAAGA--AAAAGGA-UGCUCUGGAU----C-GAAAA--UGACCGGGG |
| view | Lizard |
--------AAGAA-----------AGGG-------GUGGA-------A-----U----AAUCUGG---------------------G---CAACACUUCUUGUA--C--AAGCACUGUGCUAAAACUAUGGAAGUCGGGGUUCU--GCCUCUUCCUCUGUAGUAAUGCUAGCAUGGU----A-CACACGAGAAGAAAA--GUAA--A-UGCACUGGAU----CUGUAAA--AGACUAGGG |
| view | Frog |
================================================================================================================================================================================================================================================ |
| view | Zebrafish |
UCUAAU------------------GUCU-------CUUG------------------------------------------------------C-CUUCUUUUUAAA--AAGCGCCAUGCUAAAACCACCAG-GUCGAUGCUUUCGGGUCUCGCUCUGGUGUUCAUGCUAGUCUGGUUAAAU-CACAAAGAAGGAAGA--GCAA--AAAGCACACAGU-----CGGAAAUGAGUCUAGGA |
| view | Stickleback |
UCU---------------------GUAU-------GCAG------------------------------------------------------C-AGUCUCUCU--A--AAGCACCCCGCUAAAACUGCAGGAGCCAAGCCUUUCAGGUUUAGCUCAUGUGGCU------------C----C-AAGCACAGA----------------------GUAU-----UGAAAAUUAGGCUCUGG |
| view | Tetradon |
UU----------------------GUCU-------UUUU--------------------------------------------------------CUUCCCUCC-AA--AAGCACCCUGCUGGAACUGCAGGAGCCGCACCUCGCUGGUCCGGCUCACGUGGCUGUGUAAGCCGGGU----A-CACCAGGGAAGGAGA--GCAA--A-GGCACGGGGU-----UGAAGACGAGACAGCGA |
| view | Fugu |
UGU--------------------------------------------------------------------------------------------CUUCUCUCC-AA--AAGCACCCUGCUGGAACUGCAGGAGCCGGACCUCACUGGUUUAGCUCAUGUGGCCAUGUAAGCCGGGU----A-CACCAGGGAAGGAGA--ACAA--A-GGCACAGGGU-----UGAAGAUGAGGCAUUGG |
| view | Medaka |
UGU---------------------GAGU-------UCUA------------------------------------------------------C-CUUCUCUUC--A--AAGCACCCUGUUGGAACUGCAGGAGUGGAACCGCAGCGGUUUAGCUCGUGUGGCUGUGUCAGCUGGGU----U-CAGCAGGGAAGGAGA--UCAG--A--GCACUGCAU-----CGUAAAUGAGACCAGGA |
