Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
UCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Chimp |
UCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGCGGGCA------GGGGUGGGG--------------------------GUGGCAGAGCGCUG---UC----CCGG--GGGCGGGGCCGAAGC-------------GCGGCGAC-CGUAACU-C--C--UUCUGCU-C------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Rhesus |
UCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGUGGGUA------GGGGU-GGG--------------------------GUGGCAGAGCGCCG---UC----CCGG--GGGCGGGGCCGAAGC-------------ACGGAGAC-CGUAACU-C--C--UGCUG----------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGUGGGUA------GGGGU-GGG--------------------------GUGGCAGAGCGCCG---UC----CCGG--GGGCGGGGCCGAAGC-------------ACGGAGAC-CGUAACU-C--C--UGCUG----------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------AG--------------GGCCCAGGCGUGGGUA------GGGGU-GGG--------------------------GUGGCAGAGCGCCG---UC----CCGG--GGGCGGGGCCGAAGC-------------ACGGAGAC-CGUAACU-C--C--UGCUG----------CG--UCCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Bushbaby |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Tree Shrew |
UCAAGAUCCUCAGUCGCAGGUGGG--------------------------CAGGCCUGGGAA------GGACC------------------------------CUUGCAUAGCAACG---UCUACACCAG--GUGGGAGG---------------------UGGCCAC-UCUAACC-U--G--GCCUGCC-C------UG--CCCCC-----UAGGCUGGAAGCAAACACACAGCUCAAGAUCCUCAGUCGCAGGUGGG--------------------------CAGGCCUGGGAA------GGACC------------------------------CUUGCAUAGCAACG---UCUACACCAG--GUGGGAGG---------------------UGGCCAC-UCUAACC-U--G--GCCUGCC-C------UG--CCCCC-----UAGGCUGGAAGCAAACACACAGCUCAAGAUCCUCAGUCGCAGGUGGG--------------------------CAGGCCUGGGAA------GGACC------------------------------CUUGCAUAGCAACG---UCUACACCAG--GUGGGAGG---------------------UGGCCAC-UCUAACC-U--G--GCCUGCC-C------UG--CCCCC-----UAGGCUGGAAGCAAACACACAGC |
| view | Horse |
UCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCC-GGGGUGGGC-------GGGGC-------------------------------CGGCGGAGCAGAG----U----CGGG--GGGCGGGGCCGGAGG-------------GGAGCCGU-CCUGACC-C--C--GCCUGUC-C------CG--CCCCC-----CAGGCUAGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCC-GGGGUGGGC-------GGGGC-------------------------------CGGCGGAGCAGAG----U----CGGG--GGGCGGGGCCGGAGG-------------GGAGCCGU-CCUGACC-C--C--GCCUGUC-C------CG--CCCCC-----CAGGCUAGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCC-GGGGUGGGC-------GGGGC-------------------------------CGGCGGAGCAGAG----U----CGGG--GGGCGGGGCCGGAGG-------------GGAGCCGU-CCUGACC-C--C--GCCUGUC-C------CG--CCCCC-----CAGGCUAGAGGCGAACACGCAGC |
| view | Armadillo |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Cat |
UCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCU-GGGGUGGGC-------GGGGC-------------------------------CUGCAAAGAUGGG--GCC----GGGA--GGGCGGGGCCGGAGG-------------UCGGCCUGAACUGACC-C--C--GCCUGCC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCU-GGGGUGGGC-------GGGGC-------------------------------CUGCAAAGAUGGG--GCC----GGGA--GGGCGGGGCCGGAGG-------------UCGGCCUGAACUGACC-C--C--GCCUGCC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG--------------GGCCU-GGGGUGGGC-------GGGGC-------------------------------CUGCAAAGAUGGG--GCC----GGGA--GGGCGGGGCCGGAGG-------------UCGGCCUGAACUGACC-C--C--GCCUGCC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Dog |
UCAAGAUCCUCAGCCGCAGGUGGG------CG------------------------------------GGGCC-------------------------------UUUCAAAGCCGGG-AGGA----AGGG--GGGAGGGGCCCGAGG-------------GCGGCCCG-GCUGACC-C--C--CCCUGUC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG------------------------------------GGGCC-------------------------------UUUCAAAGCCGGG-AGGA----AGGG--GGGAGGGGCCCGAGG-------------GCGGCCCG-GCUGACC-C--C--CCCUGUC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------CG------------------------------------GGGCC-------------------------------UUUCAAAGCCGGG-AGGA----AGGG--GGGAGGGGCCCGAGG-------------GCGGCCCG-GCUGACC-C--C--CCCUGUC-U------CG---CCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Elephant |
UCAAGAUCCUCAGCCGCAGGUGGG------GG--------------GACCC-GGGGUGGGCG------GGGCU-------------------------------CUGUAGAAGGGUGGGGCC----UUGG--GAGGGGGGUC--------------------UGCGGC-CCUGACC-C--U--GUCUGCC-C------CG--CCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------GG--------------GACCC-GGGGUGGGCG------GGGCU-------------------------------CUGUAGAAGGGUGGGGCC----UUGG--GAGGGGGGUC--------------------UGCGGC-CCUGACC-C--U--GUCUGCC-C------CG--CCCCC-----CAGGCUGGAGGCGAACACGCAGCUCAAGAUCCUCAGCCGCAGGUGGG------GG--------------GACCC-GGGGUGGGCG------GGGCU-------------------------------CUGUAGAAGGGUGGGGCC----UUGG--GAGGGGGGUC--------------------UGCGGC-CCUGACC-C--U--GUCUGCC-C------CG--CCCCC-----CAGGCUGGAGGCGAACACGCAGC |
| view | Cow |
UCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GGCCC-----------------GGGGC-------------------------------GGGCAGACUCGGG-----------GA--GGGUGGGGCCGGAGG-------------UCGGCUGU-UCUGACC-C--U--GCCUGCC-C------UG---CCCC-----CAGGCUGGAGGAGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GGCCC-----------------GGGGC-------------------------------GGGCAGACUCGGG-----------GA--GGGUGGGGCCGGAGG-------------UCGGCUGU-UCUGACC-C--U--GCCUGCC-C------UG---CCCC-----CAGGCUGGAGGAGAACACGCAGCUCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GGCCC-----------------GGGGC-------------------------------GGGCAGACUCGGG-----------GA--GGGUGGGGCCGGAGG-------------UCGGCUGU-UCUGACC-C--U--GCCUGCC-C------UG---CCCC-----CAGGCUGGAGGAGAACACGCAGC |
| view | Rabbit |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Guinea Pig |
UCAAGAUCCUCAGCCGCAGGUGAG------CA-----------------CCUGACACCGGAA------G-------------------------------------CCUGGGUGAG----------CCAG--CAUU---------------------------GCCUC-UCUGACC-C--C--CUGCCCC-U------CU--GUCAC-----CAGGCUGGAGGCGAACACACAGCUCAAGAUCCUCAGCCGCAGGUGAG------CA-----------------CCUGACACCGGAA------G-------------------------------------CCUGGGUGAG----------CCAG--CAUU---------------------------GCCUC-UCUGACC-C--C--CUGCCCC-U------CU--GUCAC-----CAGGCUGGAGGCGAACACACAGCUCAAGAUCCUCAGCCGCAGGUGAG------CA-----------------CCUGACACCGGAA------G-------------------------------------CCUGGGUGAG----------CCAG--CAUU---------------------------GCCUC-UCUGACC-C--C--CUGCCCC-U------CU--GUCAC-----CAGGCUGGAGGCGAACACACAGC |
| view | HedgeHog |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Mouse |
UCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CCAGCUGUGGGCA------GAGCC-------------------------------CUCCAGAGAGGG----------CUAG--GGAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCCGGCC-U------U---GUCCC-----CAGGCUGGAGGAGAACACUCAGCUCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CCAGCUGUGGGCA------GAGCC-------------------------------CUCCAGAGAGGG----------CUAG--GGAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCCGGCC-U------U---GUCCC-----CAGGCUGGAGGAGAACACUCAGCUCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CCAGCUGUGGGCA------GAGCC-------------------------------CUCCAGAGAGGG----------CUAG--GGAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCCGGCC-U------U---GUCCC-----CAGGCUGGAGGAGAACACUCAGC |
| view | Shrew |
UCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GACCC-CGCUUGAGUAGCGCCAGGGUC-------------------------------UGGCGGGCCAGUG--AAU----GGCC--GCUCAGACCCGUAAG-------------U--------CCUGACC-C--U--CUGUGUC-C------CC--AACUC-----CUUGCUGGAGGCUAUCACACGAAUCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GACCC-CGCUUGAGUAGCGCCAGGGUC-------------------------------UGGCGGGCCAGUG--AAU----GGCC--GCUCAGACCCGUAAG-------------U--------CCUGACC-C--U--CUGUGUC-C------CC--AACUC-----CUUGCUGGAGGCUAUCACACGAAUCAAGAUCCUCAGUCGCAGGUGGG------CG--------------GACCC-CGCUUGAGUAGCGCCAGGGUC-------------------------------UGGCGGGCCAGUG--AAU----GGCC--GCUCAGACCCGUAAG-------------U--------CCUGACC-C--U--CUGUGUC-C------CC--AACUC-----CUUGCUGGAGGCUAUCACACGAA |
| view | Rat |
UCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CC-UCUGUGGGCA------GAGCC-------------------------------CACCAGCGAGGG----------CUAG--GAAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCGUGUC-U------U----UUCC-----CAGGCUGGAGGAGAACACUCAGCUCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CC-UCUGUGGGCA------GAGCC-------------------------------CACCAGCGAGGG----------CUAG--GAAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCGUGUC-U------U----UUCC-----CAGGCUGGAGGAGAACACUCAGCUCAAGAUCCUCAGCCGCAGGUGGG------AG-----------------CC-UCUGUGGGCA------GAGCC-------------------------------CACCAGCGAGGG----------CUAG--GAAUAAGGGCCCAGU-------------A-GGCCAC-UGUAACC-C--C--UCGUGUC-U------U----UUCC-----CAGGCUGGAGGAGAACACUCAGC |
| view | Tenrec |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Opossum |
UCAAGAUUCUGAGCCGCAGGUACG------CGGAGGGCAGCUCGGGGGCUUGGAACUAGGGU------GGGC-------------------------------GUGAAAAAGAAGUG--AAA----CGGG--GCCCGAGGAAUCGGC-------------GUGGCUUC-AGCUCCU-CUGC--UCCUUCC-C------UG--CUCGC-----UAGGCUGGAGAUGAACACCCAGAUCAAGAUUCUGAGCCGCAGGUACG------CGGAGGGCAGCUCGGGGGCUUGGAACUAGGGU------GGGC-------------------------------GUGAAAAAGAAGUG--AAA----CGGG--GCCCGAGGAAUCGGC-------------GUGGCUUC-AGCUCCU-CUGC--UCCUUCC-C------UG--CUCGC-----UAGGCUGGAGAUGAACACCCAGAUCAAGAUUCUGAGCCGCAGGUACG------CGGAGGGCAGCUCGGGGGCUUGGAACUAGGGU------GGGC-------------------------------GUGAAAAAGAAGUG--AAA----CGGG--GCCCGAGGAAUCGGC-------------GUGGCUUC-AGCUCCU-CUGC--UCCUUCC-C------UG--CUCGC-----UAGGCUGGAGAUGAACACCCAGA |
| view | Platypus |
UCAAGAUCCUCAGCCGCAGGUGCG------GG-----------GGGGGCGGAGGCGGCGGCC------GGGCG------------------------------GCGGGAGGAUGGAG---GC----CCAGUCGAGCGGGGCGUGAGC------------------------------U--C--CUGUGCG-U------CGUGCUGCU-----CUGCUCGGACAGUCUCCUGCAGCUCAAGAUCCUCAGCCGCAGGUGCG------GG-----------GGGGGCGGAGGCGGCGGCC------GGGCG------------------------------GCGGGAGGAUGGAG---GC----CCAGUCGAGCGGGGCGUGAGC------------------------------U--C--CUGUGCG-U------CGUGCUGCU-----CUGCUCGGACAGUCUCCUGCAGCUCAAGAUCCUCAGCCGCAGGUGCG------GG-----------GGGGGCGGAGGCGGCGGCC------GGGCG------------------------------GCGGGAGGAUGGAG---GC----CCAGUCGAGCGGGGCGUGAGC------------------------------U--C--CUGUGCG-U------CGUGCUGCU-----CUGCUCGGACAGUCUCCUGCAGC |
| view | Chicken |
================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Lizard |
UCAAGAUCAUCAGCAAGAGGUGAU------UG--------------G==================================================================================================================================C--CG-UCCCACC-C------UU--CCGUC-----CAGAAUGGAAGUGAACACGCAGCUCAAGAUCAUCAGCAAGAGGUGAU------UG--------------G==================================================================================================================================C--CG-UCCCACC-C------UU--CCGUC-----CAGAAUGGAAGUGAACACGCAGCUCAAGAUCAUCAGCAAGAGGUGAU------UG--------------G==================================================================================================================================C--CG-UCCCACC-C------UU--CCGUC-----CAGAAUGGAAGUGAACACGCAGC |
| view | Frog |
UGAAAAUCAUAAGCAGGAGGU--------------------------==================================================================================================================================------UUCUUGC-U------UG--UCUCCUGUAACAGGAUGGAAGCCAACACCCAGAUGAAAAUCAUAAGCAGGAGGU--------------------------==================================================================================================================================------UUCUUGC-U------UG--UCUCCUGUAACAGGAUGGAAGCCAACACCCAGAUGAAAAUCAUAAGCAGGAGGU--------------------------==================================================================================================================================------UUCUUGC-U------UG--UCUCCUGUAACAGGAUGGAAGCCAACACCCAGA |
| view | Zebrafish |
UGAAAAUCGUUAGUCGAAGGUAGA---GAU-----------------==================================================================================================================================------------------------------------AGGAUGGAGGCCAUGACUCAGAUGAAAAUCGUUAGUCGAAGGUAGA---GAU-----------------==================================================================================================================================------------------------------------AGGAUGGAGGCCAUGACUCAGAUGAAAAUCGUUAGUCGAAGGUAGA---GAU-----------------==================================================================================================================================------------------------------------AGGAUGGAGGCCAUGACUCAGA |
| view | Stickleback |
UCAAGAUCGUCAGCCGAAGGUGAGAUG--------------------==================================================================================================================================----CAUUGUGUU-C------UC--UGCGU-----UAGAAUGGAGGCCAACACCCAGAUCAAGAUCGUCAGCCGAAGGUGAGAUG--------------------==================================================================================================================================----CAUUGUGUU-C------UC--UGCGU-----UAGAAUGGAGGCCAACACCCAGAUCAAGAUCGUCAGCCGAAGGUGAGAUG--------------------==================================================================================================================================----CAUUGUGUU-C------UC--UGCGU-----UAGAAUGGAGGCCAACACCCAGA |
| view | Tetradon |
UCAAGAUCGUCAGCCGCAGGUGAG-----------------------GA-------CAGCCG------UCACC----GCG----------------------UGCGUCACAG----------------------------------------------CGUCGCUUCU-CCUUAACA-------UGUGUU-C------UC--UACGU-----CAGGAUGGAGGCGAACACGCAGAUCAAGAUCGUCAGCCGCAGGUGAG-----------------------GA-------CAGCCG------UCACC----GCG----------------------UGCGUCACAG----------------------------------------------CGUCGCUUCU-CCUUAACA-------UGUGUU-C------UC--UACGU-----CAGGAUGGAGGCGAACACGCAGAUCAAGAUCGUCAGCCGCAGGUGAG-----------------------GA-------CAGCCG------UCACC----GCG----------------------UGCGUCACAG----------------------------------------------CGUCGCUUCU-CCUUAACA-------UGUGUU-C------UC--UACGU-----CAGGAUGGAGGCGAACACGCAGA |
| view | Fugu |
UUAAAAUUGUCAGCAAGAGGUACA-----------------------GU-------UAGACG------GCUCU----GUGAUGAACCAAAAACAUUUGAAGCA---------------------------------AGUGUCCAGUGUUCUGCAUUUAUGUUGAAUGU-CCGUGACA----CUGUCUGUUGC------CA--UGCUG-----CAGGAUGGAGGCACAGACUCAGCUUAAAAUUGUCAGCAAGAGGUACA-----------------------GU-------UAGACG------GCUCU----GUGAUGAACCAAAAACAUUUGAAGCA---------------------------------AGUGUCCAGUGUUCUGCAUUUAUGUUGAAUGU-CCGUGACA----CUGUCUGUUGC------CA--UGCUG-----CAGGAUGGAGGCACAGACUCAGCUUAAAAUUGUCAGCAAGAGGUACA-----------------------GU-------UAGACG------GCUCU----GUGAUGAACCAAAAACAUUUGAAGCA---------------------------------AGUGUCCAGUGUUCUGCAUUUAUGUUGAAUGU-CCGUGACA----CUGUCUGUUGC------CA--UGCUG-----CAGGAUGGAGGCACAGACUCAGC |
| view | Medaka |
UCAAGAUCGUCAGCAAGAGGUAGG-----------------------========================================================---------------------------------GUUCUCGUGGGCUCUGAUCUGAAGCCGGUUCU-------------GGUUCUGUU-CUGUGUUUC--UGGAU-----CAGGAUGGAGGCUCAGACUCAGCUCAAGAUCGUCAGCAAGAGGUAGG-----------------------========================================================---------------------------------GUUCUCGUGGGCUCUGAUCUGAAGCCGGUUCU-------------GGUUCUGUU-CUGUGUUUC--UGGAU-----CAGGAUGGAGGCUCAGACUCAGCUCAAGAUCGUCAGCAAGAGGUAGG-----------------------========================================================---------------------------------GUUCUCGUGGGCUCUGAUCUGAAGCCGGUUCU-------------GGUUCUGUU-CUGUGUUUC--UGGAU-----CAGGAUGGAGGCUCAGACUCAGC |
