Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
CCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGU |
| view | Chimp |
CCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGU |
| view | Rhesus |
CCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGU |
| view | Bushbaby |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Tree Shrew |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Horse |
CCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGU |
| view | Armadillo |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Cat |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Dog |
CCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGUCCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGUCCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGU |
| view | Elephant |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Cow |
CCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGU |
| view | Rabbit |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Guinea Pig |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | HedgeHog |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Mouse |
CCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGU |
| view | Shrew |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Rat |
CCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGU |
| view | Tenrec |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
| view | Opossum |
CCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGUCCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGUCCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGU |
| view | Platypus |
CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG=========================================================================================================CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG=========================================================================================================CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG========================================================================================================= |
| view | Chicken |
ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA========================================================================================================================================================================ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA========================================================================================================================================================================ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA======================================================================================================================================================================== |
| view | Lizard |
UCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAUUCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAUUCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAU |
| view | Frog |
CCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGCCCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGCCCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGC |
| view | Zebrafish |
UCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGUUCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGUUCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGU |
| view | Stickleback |
UCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGUUCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGUUCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGU |
| view | Tetradon |
CCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGUCCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGUCCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGU |
| view | Fugu |
CCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGUCCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGUCCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGU |
| view | Medaka |
CCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGUCCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGUCCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGU |