Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
CCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGU |
view | Chimp |
CCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GUGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGAGCUGACCUUCAUCAUGGC-------------UUGGCCA----------------ACAUAAU--G----CCUCUUCCCCUUGUCUCUCCAGCACUAUCAGAGCAGCCUGU |
view | Rhesus |
CCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CAGGGGAAAUG----------GGGAUGGACUGGAAGUGGG-------------------CAGCAUGGGGCUGACCUUCAUCAUGGC-------------CUGAUCA----------------ACAUAAU--G----CCUCUUCCCCUUAUCACUCCAGCACUAUCAGAGCAGCCUGU |
view | Bushbaby |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Tree Shrew |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Horse |
CCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGCGUCAAACGCUGUGAG--UGA-------CGGGGAAGG------------GAGACGAGCUGGAAGUGGG-------------------CAGUGCUGGGCUGGCCUCUGUCACAGC-------------CUGGCCA----------------ACGU-----G----CCUCUUUCCCUCGCCUCUCCAGCACUGUCAGAGCAGCCUGU |
view | Armadillo |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Cat |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Dog |
CCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGUCCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGUCCAAG---------GCGGUGUGAAACGCUGUGAG--UGA-------CCGGGGAGACA----------GGGAUAGACUGGAAGUGGG-------------------CACAGUGGGACUGAGCUUUCUCACAGC-------------CUGGCCA----------------AAAUAAU--G----CCUCCUCCCCUUACUACUCCAGCACUGUCGGAACAGCCUGU |
view | Elephant |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Cow |
CCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGUCCAAG---------GCGGUGUCAAACGCUGUGAG--UGA-------CGGGGGAGGCG----------GGGAUAGGCUGGAAGUAAG-------------------CACACC--GGCUGACCU-----------------------CUGGCCA----------------ACAUAAUAAA----CCUCUUUCCCUUGCCACUUCAGCACUGUCAGAGCAGCCUGU |
view | Rabbit |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Guinea Pig |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | HedgeHog |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Mouse |
CCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAACGCUGUAAG--UGA-------CAGAGACAGAG----------AG-----UCCAGGGGGCAG-------------------CAGCAGAGGGCUUCCCUCCAC---------------------AGCCA----------------GCAUAAU--GAAUGCCUCUCUCCUCUCUCUCCCCAGCACUGUCAGAGCAGCCUGU |
view | Shrew |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Rat |
CCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGUCCAGG---------GCGGUGUCAAGCGCUGUAAG--UGA-------UAGAGACAGAG-----------------UCCAGGGGGCAG-------------------CAGCACAGGGCCUCCCUCCAC---------------------AGCCA----------------GCCUAAU--G----CCUCUGUCCCCUCUCUCCUCAGCACUGUCAGAGCAGCCUGU |
view | Tenrec |
============================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Opossum |
CCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGUCCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGUCCAAG---------GAGGCGUCAAACGCUGUGAG--UAA-------UGGGUUAAAUGUUGUUAUCACAGGGUUUGAGGGAAGGAGGUGGAUUUUGGUAGGGAUUUCAACAGUGGCCUGACUUCUCCCACAGG-------------UUGGGCAGUUAAGUAACACUUCUACUUUAU--G----CUAUUCUCCCUUGCUU----AGCUCUGUCAGAGCAACCCGU |
view | Platypus |
CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG=========================================================================================================CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG=========================================================================================================CCAGG---------GCGGGGUCAAGCGCUGUGAG--UAG-------CCGGGGCGGAG----------AGGAGGGAA-GGAGGAGCG-------------------GAGCCGGGCCCUG========================================================================================================= |
view | Chicken |
ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA========================================================================================================================================================================ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA========================================================================================================================================================================ACAAA------AGUGUGGGCUCAGACACUGUGAA--AGC-------CAUGAGAGA======================================================================================================================================================================== |
view | Lizard |
UCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAUUCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAUUCAGGCCAGCCAAGGAGGAAUUAAACGCUGUAAGUUAGCAGCCUUUCCUGAAAGAAA----------GGAAUGGGACAGAUCAGGG-------------------UACAGUAAUACCG----------------------------AGGUCU----------------UCCU-AU--A----CUCCGCUCUCUUUGUUUCUCAGCCAUCUCAGACCAGCCCAU |
view | Frog |
CCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGCCCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGCCCAGA---------CGGGAAUAAAAAGAUGUAAG---------------------=========================================================================================================================================UUUUUUUCUCAGCCCUCUCAGACCAGCCUGC |
view | Zebrafish |
UCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGUUCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGUUCAGA---------CUGGACUGAAACGCAGUAAG--UUG----------------===============================================================UUAACAAAUCUCUGUCUUUUUCAACAUCU---------------------------------------------UAAUU----AAGCUUUGUCAGAUCAGCCGGU |
view | Stickleback |
UCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGUUCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGUUCAAA---------GUGGAUUGAAACGGAGUAAG--UG-----------------=========================================================================================================================================---------CAGCUUUGUCGGACCAGCCUGU |
view | Tetradon |
CCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGUCCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGUCCAGA---------GCGGUUUGAAACGGAGUAAG--GG-----------------===============================================================-------------------------AUUC------------------------------------------------------CAGCAUUGUCAGACCAGCCUGU |
view | Fugu |
CCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGUCCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGUCCAGA---------GUGGUUUGAAACGGAGUAAG---------------------=========================================================================================================================================---------CAGCGUUGUCCGACCAGCCUGU |
view | Medaka |
CCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGUCCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGUCCAGA---------GCGGCUUGAAACGAAGUAGG--UG-----------------===============================================================CAAAAAAAUGAGUAUGUUUUUUUUUUUUU------------------------------------------------------CAGCUUUAUCGGACCAGCCUGU |