Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
CG------------------ACGGCUACCUCC-------AGAUCGGU--------------GGGUAGG--------------GU----------------------------UUGGGGGA--G----AGCG-----UGGGCUGGGGUUCAG-----------GGACAC------CCUCUCAC---CACUGCCC-----UCCCA----C-AGGCUCCUUCUACAAGGGAGU |
| view | Chimp |
CG------------------ACGGCUACCUCC-------AGAUCGGU--------------GGGUAGG--------------GU----------------------------UUGGGGGA--G----AGCG-----UGGGCUGGGGUUCGG-----------GGACAC------CCUCUCAG---CGCUGCCC-----UCCCC----C-AGGCUCCUUCUACAAGGGAGU |
| view | Rhesus |
CG------------------ACGGCUACCUCC-------AGAUUGGU--------------GGGUAGG--------------GG-----G----------------------CUGGGGGA--G----AGUG-----UGGGCUGGGGUUCGG-----------GGACAC------CCUCUCAG---CGCUGCCC-----UCCCC----C-AGGCUCCUUCUACAAGGGAGU |
| view | Bushbaby |
AG------------------AUGGCUACCUCC-------AGAUCGGU--------------GAGUAGG--------------GG-----------------------------UGGGGGA--G----AGCU-----UGUGCUGGGGUUUGG----------CGGACAC------CCUCCCAG---CACUGCCU-----UCCCC----C-AGGCUCCUUCUACAAGGGUGU |
| view | Tree Shrew |
====================================================================================================================================================================================================================================== |
| view | Horse |
UG------------------ACGGCUACCUUC-------AGAUCGGU--------------GAGUGG---------------GG-----UCA-------GGCCCGCA--GAGGUGUGGGA--GAGGCUGGG-----CGA-CAGGGGUCUUG-----------GGACGG------CCUCUCAG---CGCUGCCC-----UCCCC----C-AGGCUCCUUCUACAAGGGUGU |
| view | Armadillo |
====================================================================================================================================================================================================================================== |
| view | Cat |
UG------------------AUGGCUACCUCC-------AGAUAGGU--------------GAGUGGA--------------GG-----G---------GGCAGGUG--GAGGUGGGG----GCAGUAGGC-----UAAGUUGGGGUCUGG-----------AGGCAA------UCUCUCAG---CGCUGCCC-----UCCCU----C-AGGCUCCUUCUACAAGGGUGU |
| view | Dog |
UG------------------AUGGCUACCUCC-------AGAUAGGU--------------GAGUGGG--------------GG-----GCA-------GGCAGGUG--GACAUGAGGAGUGGAGGCAGGG-----CGAGCAGAGGUCUGG-----------GGGCAG------UGGCUCAG---UGCUGCCC-----UCCCUUCCUC-AGGCUCCUUCUAUAAGGGUGU |
| view | Elephant |
====================================================================================================================================================================================================================================== |
| view | Cow |
UG------------------AUGGCUACCUCC-------AGAUAGGU--------------GAGUGAG--------------GG-----GCU-------ACGGAGCG--GAGGUGGGGGC--GAGGCUCGA-----UGAGCAGGGCUCUUG-----------GGGCCA------CCUCUCAC---UGCUGCGC-----UCCCC----C-AGGCUCCUUCUACAAGGGCGU |
| view | Rabbit |
---------------------------CCUCC---------------------------------------------------------------------------------------C--C---------------------------------------------------UCCCU-------------------GCUGA----U-AGUCUCCGGCUACAAUGGUGC |
| view | Guinea Pig |
AG------------------ACGGCUACUUGC-------AGAUAGGU--------------GAGCGUU--------------GC-------------------------------AGGGC--CCAG-UGGG-----UGCAUUGUGGGUCAGGUGGGAGCCCAGGCCGCCUGGCCUCUCUGAG---CUCCUUGCAACCUCCCUG----C-AGGCUCUUUCUACAAGGGUGU |
| view | HedgeHog |
====================================================================================================================================================================================================================================== |
| view | Mouse |
AG------------------AUGGAUACCUCC-------AGAUUGGU--------------GAGUAGG--------------GC--------------------------------GGGC--C----UGUG-----UGGGCUGGGUUUUGGGUGUUGCUUUCG--UGUUUA---CAUCUAGG---CACCGCGC-----UCCCA----C-AGGCUCCUUCUACAAGGGUGU |
| view | Shrew |
CG------------------ACGGCUACCUCC-------AGAUCGGU--------------GAGUUGG--------------GGUGGGCGAG-------GGCGGGGA--GGGGCAGGGGG--GAAGCGGGGAGGCUCAAACUGGGCUGU--------------------------------------CCGCCU-----UCCCC----C-AGGCUCCUUCUACAAGGGGGU |
| view | Rat |
UG------------------AUGGCUACCUCC-------AGAUUGGU--------------GAGUAGG--------------GC-------------------------------AGGGC--C----UGUG-----UGGGCUGGGUUUUGGGUGUUGUUGUUGGGUGUUUA---CAUCUAGG---CACUGCGC-----UCCCA----C-AGGCUCCUUCUACAAGGGUGU |
| view | Tenrec |
UG------------------AUGGCUACCUCC-------AGAUCAGU--------------GAGUAUG--------------GG------------------------------GAUGGG--GUUAGAGAG-----GGGGCUGAG===================================================================AUCCUUGCACAAGGGUGU |
| view | Opossum |
AG------------------AUGGCUACCUCC-------AGAUCGGU--------------GAGUAGG--------------CC-------------------------------AGAGC--CAGG-AAGA-----UGAGCAGAG-----------------------------GCUCUGAGGUGCCCCUCCA-----CCCCG----C-AGGUUCUUUCUCCAAGGGUGU |
| view | Platypus |
CGCGGCGGGCGGGGCACGUCGCGUCUGCGUUCCGCACGCGGAAGGUC--------------GGGUCGG--------------GC-----GAU-------GGGCGACGCUGAC-------------------------------------------------------------------GAG---GCGGGCCG-----UCCCA----C-CGGCUCCGUUUCCCUCGCGGA |
| view | Chicken |
CG------------------AUGGCUACAUCC-------AGAUAGGUA-------------UGGCAGG--------------GA-----GGAGACCCUG---------------------------------------------------------------------------CGCCUCAC---CUGUGCUC-----UCCCA----CCAGGCUCCUUCUCCAAGGGUGU |
| view | Lizard |
UG------------------ACGGCUACAUAC-------AGAUAGGUAAAUUGCUGGUUCAGGGCAAA--------------CA-----GGA-------GCCUGCUG--------------------------------------------------------------------------------CUGUCC-----UCCCA----C-AGGCUCCUUUUCCAAAGGCAU |
| view | Frog |
=================================================================================================================================================---------------------------------------------CCU-----UCCCA----C-AGGAUCCUUUAACAAGGGUAU |
| view | Zebrafish |
AG------------------AUGGCUUCAUCA-------GAAUAGGU--------------GAGCAAG-----------------------------------------------------------------------------===================================================================----UUUGAGAAUGGAGU |
| view | Stickleback |
AG------------------ACGGAUUCAUCA-------GGAUCGGU--------------GAGUAAG----------------------------------------------------------------------------------------------------------------------------C-----UUCUU----C-AGGAACGUUCAAGAGCGGCCU |
| view | Tetradon |
=================================================================================================================================================------------------------------------------------------------CAC-AGGUCAUUUUGAGAAAGGUGU |
| view | Fugu |
=================================================================================================================================================--------------------------------------------------------------C-AGGAACCUUCCAGAAUGGGAU |
| view | Medaka |
AG------------------ACGGCUUCAUCA-------GAAUAGGU--------------GAGACAGACUGAGAGGAGGACAU-----------------------------------------------------------------------------------C------CCUCUCAU---ACUUG--U-----UCUUU----C-AGGAAUGUUCCAGAACGGGAU |
