Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
GAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCGGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCGGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCGGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGA |
view | Chimp |
GAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACUGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAUUUG----ACCCC-------------GUGCCACCCU----UUUCC------CCAGCUACGAGUUCAUGCGGAGA |
view | Rhesus |
GAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACCGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAGCUG----ACCCC-------------GUGCCAUCCU----CUUCC------CCAGCUACGAGUUCAUGCGGCGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACCGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAGCUG----ACCCC-------------GUGCCAUCCU----CUUCC------CCAGCUACGAGUUCAUGCGGCGAGAGGCUCUGCGUCGGGCCAGGUGGGGCCAGGCGGUG-----GUGGGCACCGCUGGG------------------G-----------------------------------------------------UGGGCACAG---CAGCCAUG----CAGAGCAGGCAGCUG----ACCCC-------------GUGCCAUCCU----CUUCC------CCAGCUACGAGUUCAUGCGGCGA |
view | Bushbaby |
GAGGCUCUGCAUCAGGCCAGGUGGGGCCAAGUGGGAU----GUGGGCCUAGUUGGG-----------------UA-----------------------------------------------------CUGGGGCAA---UAGCUAUA----CAAAGUGGGAACCUG----ACAGA-------------GUGCUGCCUU----CUCCU------GCAGCUAUGAGUUUAUGCGAAGAGAGGCUCUGCAUCAGGCCAGGUGGGGCCAAGUGGGAU----GUGGGCCUAGUUGGG-----------------UA-----------------------------------------------------CUGGGGCAA---UAGCUAUA----CAAAGUGGGAACCUG----ACAGA-------------GUGCUGCCUU----CUCCU------GCAGCUAUGAGUUUAUGCGAAGAGAGGCUCUGCAUCAGGCCAGGUGGGGCCAAGUGGGAU----GUGGGCCUAGUUGGG-----------------UA-----------------------------------------------------CUGGGGCAA---UAGCUAUA----CAAAGUGGGAACCUG----ACAGA-------------GUGCUGCCUU----CUCCU------GCAGCUAUGAGUUUAUGCGAAGA |
view | Tree Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Horse |
GGGGCUCUCCGUCGAGCCAGGUGGGGC--------------ACAGGCCGGCCUGGG------------------G---GG---------------------------------------------CCCCGGGCGGGG---CC-----------AGAGCAGGGCCCUG--UGAGCGC-------------AGGCUGCUUU----CUUCC------CCAGCUACGAGUUCAUGCGGAGGGGGGCUCUCCGUCGAGCCAGGUGGGGC--------------ACAGGCCGGCCUGGG------------------G---GG---------------------------------------------CCCCGGGCGGGG---CC-----------AGAGCAGGGCCCUG--UGAGCGC-------------AGGCUGCUUU----CUUCC------CCAGCUACGAGUUCAUGCGGAGGGGGGCUCUCCGUCGAGCCAGGUGGGGC--------------ACAGGCCGGCCUGGG------------------G---GG---------------------------------------------CCCCGGGCGGGG---CC-----------AGAGCAGGGCCCUG--UGAGCGC-------------AGGCUGCUUU----CUUCC------CCAGCUACGAGUUCAUGCGGAGG |
view | Armadillo |
GAGGCCCUGCGGAGGGCCAG-------AGAGGGGGGCGGGGGUGGGC------------------------------------------------------------------------------------------====================================================================================================GAGGCCCUGCGGAGGGCCAG-------AGAGGGGGGCGGGGGUGGGC------------------------------------------------------------------------------------------====================================================================================================GAGGCCCUGCGGAGGGCCAG-------AGAGGGGGGCGGGGGUGGGC------------------------------------------------------------------------------------------==================================================================================================== |
view | Cat |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Dog |
GGGGCUCUGCGUCGAGCCAGGUGAGGU--------------GUGGGCCUGCCCAGG------------------G---G-----------------------------------------------CUGGGGAGGGG======================GGGGCCUGAGUGAGCAC-------------AUUCCACUUU----CUCCC------CCAGCUACGAGUUCAUGCGGAGAGGGGCUCUGCGUCGAGCCAGGUGAGGU--------------GUGGGCCUGCCCAGG------------------G---G-----------------------------------------------CUGGGGAGGGG======================GGGGCCUGAGUGAGCAC-------------AUUCCACUUU----CUCCC------CCAGCUACGAGUUCAUGCGGAGAGGGGCUCUGCGUCGAGCCAGGUGAGGU--------------GUGGGCCUGCCCAGG------------------G---G-----------------------------------------------CUGGGGAGGGG======================GGGGCCUGAGUGAGCAC-------------AUUCCACUUU----CUCCC------CCAGCUACGAGUUCAUGCGGAGA |
view | Elephant |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Cow |
GCUGCUCUGCGUCAAGCCAGGUGGGGU--------------GCCGACAGAACCUAG------------------G---G------------------------------------------------CCAGGCGGAG---CC-UAGGG----CAGUGCGGGGCCCUG--GGGGCUC-------------ACUCAGCUUU----CCUCU------CCAGUUAUGAGUUCAUGCGGAGGGCUGCUCUGCGUCAAGCCAGGUGGGGU--------------GCCGACAGAACCUAG------------------G---G------------------------------------------------CCAGGCGGAG---CC-UAGGG----CAGUGCGGGGCCCUG--GGGGCUC-------------ACUCAGCUUU----CCUCU------CCAGUUAUGAGUUCAUGCGGAGGGCUGCUCUGCGUCAAGCCAGGUGGGGU--------------GCCGACAGAACCUAG------------------G---G------------------------------------------------CCAGGCGGAG---CC-UAGGG----CAGUGCGGGGCCCUG--GGGGCUC-------------ACUCAGCUUU----CCUCU------CCAGUUAUGAGUUCAUGCGGAGG |
view | Rabbit |
GAGUCGCUGCGCAGGGCCAG-------==================================================================================================================================================================================================================GAGUCGCUGCGCAGGGCCAG-------==================================================================================================================================================================================================================GAGUCGCUGCGCAGGGCCAG-------================================================================================================================================================================================================================== |
view | Guinea Pig |
GAGGCUCUGCGGCGGGCCAGGUGGGGCU-------------C-GGGGACAGCGGGG------------------ACACA------------------------------------------------UUGGGCACCG---CCACCAGG----AAGGGGUGGAAUUUG----GAAGCUGACCAAGCAGGUGCCC--CCCU----UUUUC------UCAGCUACGAGUACAUGCGGAGAGAGGCUCUGCGGCGGGCCAGGUGGGGCU-------------C-GGGGACAGCGGGG------------------ACACA------------------------------------------------UUGGGCACCG---CCACCAGG----AAGGGGUGGAAUUUG----GAAGCUGACCAAGCAGGUGCCC--CCCU----UUUUC------UCAGCUACGAGUACAUGCGGAGAGAGGCUCUGCGGCGGGCCAGGUGGGGCU-------------C-GGGGACAGCGGGG------------------ACACA------------------------------------------------UUGGGCACCG---CCACCAGG----AAGGGGUGGAAUUUG----GAAGCUGACCAAGCAGGUGCCC--CCCU----UUUUC------UCAGCUACGAGUACAUGCGGAGA |
view | HedgeHog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Mouse |
GAAGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGAUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----AACAGUGA----------GCCCAAUCCU----UUCCU------CCAGCUACGAAUACAUGCGACAGGAAGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGAUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----AACAGUGA----------GCCCAAUCCU----UUCCU------CCAGCUACGAAUACAUGCGACAGGAAGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGAUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----AACAGUGA----------GCCCAAUCCU----UUCCU------CCAGCUACGAAUACAUGCGACAG |
view | Shrew |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Rat |
GAGGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGCUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----ACCAGUGA----------GCCCAGCCCU----UUCCU------CCAGCUACGAAUACAUGAGACGGGAGGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGCUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----ACCAGUGA----------GCCCAGCCCU----UUCCU------CCAGCUACGAAUACAUGAGACGGGAGGCUCUGCAGCGGGCCAGGUGGGGCU-------------UUAGGGACUGCUGGG------------------A---G------------------------------------------------CUGGGUGGAA---ACAU------------GGGGGAAUGUG----ACCAGUGA----------GCCCAGCCCU----UUCCU------CCAGCUACGAAUACAUGAGACGG |
view | Tenrec |
ACAGCCCUGAGCAGGG-----------===================================================================================================================================================================------------------------CCAGCUAUGAGUUUAUGAGGCGGACAGCCCUGAGCAGGG-----------===================================================================================================================================================================------------------------CCAGCUAUGAGUUUAUGAGGCGGACAGCCCUGAGCAGGG-----------===================================================================================================================================================================------------------------CCAGCUAUGAGUUUAUGAGGCGG |
view | Opossum |
GAUGCCCUGAGGAGAGCCAGGUGGGUU--------------UUGGGGAUG----------------------------------------------------------------------------------AGCAG----------------AGAGCU-----------CUUUGU-------------GCCUCUUCUU----ACUUC------CUAGCUAUGAGUUCAUGCGGAGAGAUGCCCUGAGGAGAGCCAGGUGGGUU--------------UUGGGGAUG----------------------------------------------------------------------------------AGCAG----------------AGAGCU-----------CUUUGU-------------GCCUCUUCUU----ACUUC------CUAGCUAUGAGUUCAUGCGGAGAGAUGCCCUGAGGAGAGCCAGGUGGGUU--------------UUGGGGAUG----------------------------------------------------------------------------------AGCAG----------------AGAGCU-----------CUUUGU-------------GCCUCUUCUU----ACUUC------CUAGCUAUGAGUUCAUGCGGAGA |
view | Platypus |
GAGGCGCUGAGGAGAGCCAG-------====================================================================================================================================GGCCUCUG----AGUCC-------------CAGUGGCUCUUGUCCCUUC------CCAGCUACGAGUUCAUGCGGAGAGAGGCGCUGAGGAGAGCCAG-------====================================================================================================================================GGCCUCUG----AGUCC-------------CAGUGGCUCUUGUCCCUUC------CCAGCUACGAGUUCAUGCGGAGAGAGGCGCUGAGGAGAGCCAG-------====================================================================================================================================GGCCUCUG----AGUCC-------------CAGUGGCUCUUGUCCCUUC------CCAGCUACGAGUUCAUGCGGAGA |
view | Chicken |
GAGGCGCUCAAAAGAGCCAGGUGGG----------------CUGAGCCCCCCGAGA------------------A---GGGUCUGCUUUGUGCUGCACAUCUGCUGCAGCCCUGUGCUGUUUGUUUCCUGGGAUCAC---UCGUGGUGAACCCAGGGAGUGGCUCUG-----------------------CUCUGUUCU----UUUCU-----UACAGCUAUGAGUUCAUGAGAAGAGAGGCGCUCAAAAGAGCCAGGUGGG----------------CUGAGCCCCCCGAGA------------------A---GGGUCUGCUUUGUGCUGCACAUCUGCUGCAGCCCUGUGCUGUUUGUUUCCUGGGAUCAC---UCGUGGUGAACCCAGGGAGUGGCUCUG-----------------------CUCUGUUCU----UUUCU-----UACAGCUAUGAGUUCAUGAGAAGAGAGGCGCUCAAAAGAGCCAGGUGGG----------------CUGAGCCCCCCGAGA------------------A---GGGUCUGCUUUGUGCUGCACAUCUGCUGCAGCCCUGUGCUGUUUGUUUCCUGGGAUCAC---UCGUGGUGAACCCAGGGAGUGGCUCUG-----------------------CUCUGUUCU----UUUCU-----UACAGCUAUGAGUUCAUGAGAAGA |
view | Lizard |
==============================================================================================================================================================================================UUUUGUUUU----GUUUCC--GCUCCAGUUAUGAGUUCAUGAGGAGC==============================================================================================================================================================================================UUUUGUUUU----GUUUCC--GCUCCAGUUAUGAGUUCAUGAGGAGC==============================================================================================================================================================================================UUUUGUUUU----GUUUCC--GCUCCAGUUAUGAGUUCAUGAGGAGC |
view | Frog |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Zebrafish |
======================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================= |
view | Stickleback |
GACUCCAUUAUCAAGGCCAGGUGGGAC===================================================================================================================================================================-------------------------CAGUUACGAGUUCAUGAGGAAGGACUCCAUUAUCAAGGCCAGGUGGGAC===================================================================================================================================================================-------------------------CAGUUACGAGUUCAUGAGGAAGGACUCCAUUAUCAAGGCCAGGUGGGAC===================================================================================================================================================================-------------------------CAGUUACGAGUUCAUGAGGAAG |
view | Tetradon |
GAUGCCAUCGUCAAGGCCAGGUAGCAU----------------CAGCCUGUUCAGAUAUGCACGGUGCGCAUAU---------------------------------------------------------------CAGCCUCAGGGACG---------CAAUCUU----GUUAC-------------AUGUUACUCU----CAUCUCAUG---CAGCUAUGAGUUCAUGAGGAAAGAUGCCAUCGUCAAGGCCAGGUAGCAU----------------CAGCCUGUUCAGAUAUGCACGGUGCGCAUAU---------------------------------------------------------------CAGCCUCAGGGACG---------CAAUCUU----GUUAC-------------AUGUUACUCU----CAUCUCAUG---CAGCUAUGAGUUCAUGAGGAAAGAUGCCAUCGUCAAGGCCAGGUAGCAU----------------CAGCCUGUUCAGAUAUGCACGGUGCGCAUAU---------------------------------------------------------------CAGCCUCAGGGACG---------CAAUCUU----GUUAC-------------AUGUUACUCU----CAUCUCAUG---CAGCUAUGAGUUCAUGAGGAAA |
view | Fugu |
GAUGCCAUUAUCAAGGCCAGGUAGCGC==============================================================================================================CAGUCUCAGGGACA---------CCUUUUU----GAUGC-------------AUUAUAUUCU----CAUC----A---CAGUUACGAGUUCAUGAGGAAAGAUGCCAUUAUCAAGGCCAGGUAGCGC==============================================================================================================CAGUCUCAGGGACA---------CCUUUUU----GAUGC-------------AUUAUAUUCU----CAUC----A---CAGUUACGAGUUCAUGAGGAAAGAUGCCAUUAUCAAGGCCAGGUAGCGC==============================================================================================================CAGUCUCAGGGACA---------CCUUUUU----GAUGC-------------AUUAUAUUCU----CAUC----A---CAGUUACGAGUUCAUGAGGAAA |
view | Medaka |
GAUGCUAUUAUCAAAGCCAGGU-----===================================================================================================================================================================-------------------------CAGCUAUGAGUUCAUGAGGAAGGAUGCUAUUAUCAAAGCCAGGU-----===================================================================================================================================================================-------------------------CAGCUAUGAGUUCAUGAGGAAGGAUGCUAUUAUCAAAGCCAGGU-----===================================================================================================================================================================-------------------------CAGCUAUGAGUUCAUGAGGAAG |