Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
CAUUAACAGG-U-GA------------GGGCAUGCAG---GC----CUGGAUGGGGCAGCUGGG-----AU---GGUCCAAAAGGGUGGCCUC-A------------C--------CAGCCCUGU------G--------------UUCCC------UAGGGAGGCCACA |
| view | Chimp |
CAUUAACAGG-U-GA------------GGGCAUGCAG---GC----CUGGAUGGGGCAGCUGGG-----AU---GGUCCAAAAGGGUGGCCUC-A------------C--------CAGCCCUGU------G--------------UUCCC------UAGGGAGGCCACA |
| view | Rhesus |
CAUUAACAGG-U-GA------------GGGCAUGCAG---GC----CUGGAUGGGGCAGCUGGG-----AU---GGUCCAAAAGGGUGGCCUC-A------------C--------CAGCCCUGU------G--------------UUCCC------UAGGGAGGCCACA |
| view | Bushbaby |
CAUUAACAGG-UGGG------------GGGCAGGCAA---GA----CUGGAUGGGGCAGCUGAG-----AA---GGGCUGGAAGGGUAGCCUC-A------------C-U------CAGCCCUAU------A--------------UUCCC------UAGGGAGGCCACA |
| view | Tree Shrew |
CAUUAACAGG-UGGG------------UAGCGGGUAGGGCGC----CGGGGUGGGCGAGCCGGG------------------AGGGAGACCUC-A------------C--------CAGCCCUGU------======================================= |
| view | Horse |
CAUUAACAGGUUGGG------------GGGCCAUCAG---GG----UGGAGCAGGACAGCUGGG-----AU---GGUCCAGAAGGGUAGUUUC-A------------C-C------CAGCCCUAU------A--------------UUCCC------UAGGGAGGCCACA |
| view | Armadillo |
CAUUAACAGG-U-GG------------GGCCGGCCCG------------GGCGGGGUGGCUGGG-----AA---GCGCCGGAAGGGGCACCUC-A------------C-C------CAGCCCUCU--------------------CUUCCC------CAGAGAGGCCACA |
| view | Cat |
========================================================================================================================================================================== |
| view | Dog |
CAUUAACAGG-UGGG------------AGGCAGGUGG---GG----CGCAGAGGAGUGGCUGGGCUGGCCU---GGUCCAGAAGGGUGGGCUC-A------------C-C------CCACCCUCU------A--------------UUCCC------CAGGGAGGCCACG |
| view | Elephant |
========================================================================================================================================================================== |
| view | Cow |
CAUUAACAGG-UGGG-------------GACUGUCA----GG----UGGAGCGGGGCGGCGGGG-----GU---GGCUCAGGAGGG--GCCUC-A------------C-C------CAGCCCUUU------G--------------UUCCC-------AGGGAGGCCACC |
| view | Rabbit |
CAUUAACAGG-UUGG------------GGACCGGCAG---GA----GUGGACUGGGCAGCUGGG-----UA---GGGCCCAAAGCACAGCCUCAA------------C-C------CAGCCGUCU------A--------------UUCCC------UAGGGAGGCCACA |
| view | Guinea Pig |
CAUUAACAGG-UAGG------------GGACAGGCAG---GA----CCAGAGAGGGGUCCAGAG-----GG---C-----AAGGGGCAGCUUC-A------------C-C------CA-CCUGUU------GU----------CACUUCCC------UAGGGAGGCCACG |
| view | HedgeHog |
CAUUAGCAGG----------------------------------------------------GA---------------------------========================================---------------------------AAGGAAGCCACC |
| view | Mouse |
CAUUAACAGG-UGGG------------UGGCAACCAG---GGUUACAUACAGAGGGACUCAGAG-----AA---UGACCAGAUGUGUAGCUUC-A------------C-A------CAGCAUUUU------G--------------UUCCC------CAGGGAGGCUACC |
| view | Shrew |
========================================================================================================================================================================== |
| view | Rat |
CAUUAACAGG-UGAG------------UGGUAAGCAG---G-----AGAGUGAGAGGGCCCUGG-----AA---CGGCCAGAGGUGUAGCCUC-A------------C-A------CAGCACUUU------G--------------UUCCC------UAGGGAGGCCACC |
| view | Tenrec |
=================================================GGUGGGGCAGCUGAG-----AA---A-GCCAGAGGAGUAACCUUAA------------C-C------CAGCUCUGC--------------------AUUCUC------UAGGAAGACCACC |
| view | Opossum |
CAUUAACAGG-UGAG----------CAGAGCAGUGAA---GG----CCA-GAAGAAACAAAGGA-----AA---GUUCCAAGCAAAGGAAUUA-A------------C-C------CUCCUUACU-------UU-------UCUCUCUCUC------CAGGGAGGCCACU |
| view | Platypus |
CAUUAACAGG-UGGG-----------CCGCCGGGCUG---AG----CUG--GGGGACGAUGGGG-----CU---GGCCCGGUGGAGGGGGAGC-AGGGGCGCCAGUUC-C------CAACCCUUC-------------------CUCUCCCCCAACCCAGAGAGGCGACG |
| view | Chicken |
CAUCAACAGG-UGAG------------UGACCCACGU---GU----GUGAACGUGAGAGCCCAA----------AGCCUCGGGGCUCUGCUAC-A------------U-CAGGUGAUGGCUCUGU--------------------GUUCCC-CCGUGCAGGGAGGCCUCC |
| view | Lizard |
========================================================================================================================================================================== |
| view | Frog |
CAUUAACAGG-UAAG------------UAG--GGUGG---GG----CUGUCUGAGAGAGUUGGG-----GACUGGAACCAGGAACUUUAUCCC-C------------CAC------CAACCUGCU--------AUCCCCUGUCUCUGCCCC------CAGGGAUGAGAAG |
| view | Zebrafish |
CGUCAACAGG-UCAA--------CA------------------------==================================================================================---------------UUU--------CAGGGAUAAGCAG |
| view | Stickleback |
AGUGAACAGG-UCUG----------------------------------GUCCCGCAGGCGGGA-----GC---UUA---------UUGCC------------------------------CUCGUUUUUU--------------GUUCCG------CAGGGGGAAAGAG |
| view | Tetradon |
UGUGAACAGG-U-------------------------------------========================================================================================================================= |
| view | Fugu |
UGUGAACAGG-UUUG--------CA------U-----------------==========================================-------------------------UACUUCUUCCUUUUU--------------ACUC--------CAGAGGAAAAGAA |
| view | Medaka |
UGUGAACAGG-UGUGACCCUUUGCA------U-----------------AUCAAUCAUGUGGAA-----AA---UGACAGCAACGUUGGCC------------------------------CUUUUUGUCU--------------GCUUU-------CAGGGGAAAGGAG |
