Color Code: mir sequence mir* sequence predicted mir* mutation
| Species | Sequence | |
|---|---|---|
| view | Human |
C----CAUGACUA-----CCUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGUGC--CGCCGGGGCC--GG-GCGCUGUUUCAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Chimp |
C----CAUGACUA-----CCUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGUGC--CGCCGGGGCC--GG-GCGCUGUUUCAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Rhesus |
C----CAUGACUA-----CCUGCCCC-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCGC--CGCCGGGGCC--AG-GCGCUGUCUAAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Bushbaby |
================================================================================================================================================================================================================== |
| view | Tree Shrew |
C----CACGACUA-----CCUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GCGGCGU--CGCCAGGGCC--GG-GCGCCGUCUCAGCCCGC----UCGU--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCGCC |
| view | Horse |
C----CAUGACUA-----UCUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCAC--UGCCAGGGCC--AGGGCGCCGUCUCAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCGCC |
| view | Armadillo |
C----CUUGACUA-----CCUGCCUU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCCU--CUUGAGGGCC--GG-GCGUUGUCUCAGUUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Cat |
C----CACGACUA-----CUUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGUGC--UGCCAGGGCC--AGGGCACUGUCUCAGCUCACU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Dog |
C----CAUGACUA-----CUUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCGC--CGCCAAGGCC--AGGGCACUGUCUCAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGAGGCACC |
| view | Elephant |
C----CACGACUA-----CCUGCCCCUUGUUGAGG--------------ACUCGA--GAGG-------UGGAAGA----GUGGCCGUCGCCCAAGGCCCAGG-GCGCUGUUUCAGCUGGCCCUCUCCC--------CC----------------CCCACCU-CUC--UCUCA--------------UCAGGUGCGGCUGCAGGAGGCCCC |
| view | Cow |
C----CACGACUA-----CCUGCCCU-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCGC--UGCCAGGGCC--AGGGCACUGUCUCAGCUCGCU---UCUC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGCUUGCAGGAGGCGCC |
| view | Rabbit |
================================================================================================================================================================================================================== |
| view | Guinea Pig |
================================================================================================================================================================================================================== |
| view | HedgeHog |
C----CAUGACUA-----CCUGCCCC-UGGUGAGG--------------ACUCGG--GAGG-------UGGAGG-----GUGGCGC--UGGCA-GGCC--CCGGCGCCGGCUCAGCUCGCC-----UC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGCCUGCAGGAGGCGCC |
| view | Mouse |
C----CAUGACUA-----CCUGCCUC-UGGUGAGG--------------ACUGGG--GAGG-------UGGAGG-----GUAGCAU--CAUUAGAGCC--AGAGCUCUGUCUCAGCUCCC----UCUC--------CC----------------CCCACCUCUUC--UCUCC--------------UCAGGUACGACUGCAAGAGGCACC |
| view | Shrew |
==============================================================================================================================UC--------CC----------------CACCCUUGCUC--UCUUUUUGUUUUUCUGAAGUCUGAUGCGCA-GCAGCAAGCACC |
| view | Rat |
C----CAUGACUA-----CCUGCCUU-UGGUGAGG--------------ACUGGG--GAGG-------UGGAGG-----GUAGUAC--CAUUAGAGCC--AGAGCUCUGUCUCAGCUCCC----UCUC--------CC----------------CCCACCUCUUC--UCUCC--------------UCAGGUACGACUGCAAGAGGCUCC |
| view | Tenrec |
C----CACGACUA-----CCUGCCGC-UGGUGAGG--------------ACUUGG--GAGG-------UGGAGGGCGGCGUGGCCG--GCCC--GGC---GG-GCGCCGUCUCAGCUCGCC----GGC--------CC----------------CCCACCUCCUC--UCUCC--------------UCAGGUGCGGCUGCAGGCGGCCUG |
| view | Opossum |
================================================================================================================================================================================================================== |
| view | Platypus |
C----UGAGUGGA-----CAGGUCCU-CGGAAAAA--------------CUCCAG--GAAGAUGGAUUUAGGAG-----GUCCUCC--UCCCCCGCCC-----CCUCCCCCUUGGUUGUUC---UG-C--------CCGGGAGGGAGGCUCCAGCCCAUCUUAUC--GCCCG--------------U-AGGUGACCCUGCAGCUGGCCUC |
| view | Chicken |
==============================================================================================================================CC--------UU----------------GCAGCCUCCUA--ACCCCCUU-----------GCAGGUGCAGUUGCAGCAAGCACG |
| view | Lizard |
==============================================================================================================================---------------------------------CUUCCA--CUUCC--------------ACAGAUGAAGCUUCAGCAAGCAGC |
| view | Frog |
================================================================================================================================================================-CCCC--UUUCC--------------ACAGAUUAGCUUGCAGUCCCCAGA |
| view | Zebrafish |
================================================================================================================================================================UUGUU--UCCUG--------------ACAGGUGCGUCUGCAGCUUGCAUC |
| view | Stickleback |
====================================================================================-C--CGCCGCAGCC--UCAGCCCGCCAU----UC--------CGCAGCACAUCU----------------CCCAGUUCCAC--CUCCA--------------ACAAGC-CUUCUGCUGCUCCCACC |
| view | Tetradon |
UCUACUUCGAUCGCCACCCCGGCCUC-UUCCGCCACGUCCUCCACUUCUACCAGA--CCGG-------GAAGCU-----GCA--GC--CUCCGGGGCA--UUUCUGCUGACUGAGAUC--------UA--------CU----------------CCGACUUCUGCAGAUCCC--------------UCUGGAGCGCCUGAAAAGGGCUUC |
| view | Fugu |
U----UUGGACUA-----CCUGCCCC-UGGUGAGAUGUGC---------ACACGU--CAUG-------UAAAGU-----GCG--------------CA--CCUGUAUUUACU----UC--------CG--------UC----------------CCUUUUUCUCC--ACUCA--------------UCAGGUGCGUCUGCAGUUGGCCUC |
| view | Medaka |
U----CCUGACUA-----CCUUCCCC-UGGUUAGUCG------------ACUUGCAA---------------------------============================================================================UCCCA--UUUCC--------------UCAGGUGCGUCUGCAGCUGGCAUC |
