Color Code: mir sequence mir* sequence predicted mir* mutation
Species | Sequence | |
---|---|---|
view | Human |
ACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCCUGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCCUGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCCUGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCA |
view | Chimp |
ACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCGCGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGGCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCGCGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGGCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUA--UGCUACUUC-UCGCGAGCCA---------------------------------UUCUGA----------------------------------------GCCUCA--------------------AUCACUUGGCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCAGGGAUAG---------CCUGA-----------AGUCCCAAA-GUCUUCA |
view | Rhesus |
ACAUUCUUCCUAGUUUA---------------CUG--UGCUACUUC-UCCUGUGCCA---------------------------------GUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCGGGGAUAG---------CCUGA-----------AGUCUCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUG--UGCUACUUC-UCCUGUGCCA---------------------------------GUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCGGGGAUAG---------CCUGA-----------AGUCUCAAA-GUCUUCAACAUUCUUCCUAGUUUA---------------CUG--UGCUACUUC-UCCUGUGCCA---------------------------------GUCUGA----------------------------------------GCCUCA--------------------AUCACUUGCCA-GAGAGAU--------------------UGGUUCAGGAAUU--UGUCGGGGAUAG---------CCUGA-----------AGUCUCAAA-GUCUUCA |
view | Bushbaby |
ACAUUUUUCCUUUUUUUUUCCAUUUUUCCUUUCCA--GGCUGCUUC-UCUCGAGCCA---------------------------------GACCAA----------------------------------------GCUUCA--------------------ACCACUGGCCA-CAGAGAC--------------------UAGUUCAGUGAUU--UGUUGAGGAUGA---------CCUUA-----------AGUCUCAA--GUCUCUAACAUUUUUCCUUUUUUUUUCCAUUUUUCCUUUCCA--GGCUGCUUC-UCUCGAGCCA---------------------------------GACCAA----------------------------------------GCUUCA--------------------ACCACUGGCCA-CAGAGAC--------------------UAGUUCAGUGAUU--UGUUGAGGAUGA---------CCUUA-----------AGUCUCAA--GUCUCUAACAUUUUUCCUUUUUUUUUCCAUUUUUCCUUUCCA--GGCUGCUUC-UCUCGAGCCA---------------------------------GACCAA----------------------------------------GCUUCA--------------------ACCACUGGCCA-CAGAGAC--------------------UAGUUCAGUGAUU--UGUUGAGGAUGA---------CCUUA-----------AGUCUCAA--GUCUCUA |
view | Tree Shrew |
GCUCUCUCCCUGUAUUA---------------CCG--UGCUGCCUC-UCUUGAGCCA-------------------------------------------------------------------------------GUCUCA--------------------ACUGGUCGUCA---GAGAU--------------------UGGUUCAGAAAUU--UGUCAGGGAUGG---------UC--A-----------AGUCUCAAGGGUUUCCAGCUCUCUCCCUGUAUUA---------------CCG--UGCUGCCUC-UCUUGAGCCA-------------------------------------------------------------------------------GUCUCA--------------------ACUGGUCGUCA---GAGAU--------------------UGGUUCAGAAAUU--UGUCAGGGAUGG---------UC--A-----------AGUCUCAAGGGUUUCCAGCUCUCUCCCUGUAUUA---------------CCG--UGCUGCCUC-UCUUGAGCCA-------------------------------------------------------------------------------GUCUCA--------------------ACUGGUCGUCA---GAGAU--------------------UGGUUCAGAAAUU--UGUCAGGGAUGG---------UC--A-----------AGUCUCAAGGGUUUCCA |
view | Horse |
ACAUUUUUCCUAUUUUA---------------CUAAAUGCUGCUUC-UCUUA-GCCA---------------------------------GUCCAA----------------------------------------GCCUCA--------------------CUCACCGGCCG-GAGAGAU--------------------UGAUUCAAGAAUU--UAUUGGGGAUAG---------CCUUC-----------AGGCACAAAGGUUUCCAACAUUUUUCCUAUUUUA---------------CUAAAUGCUGCUUC-UCUUA-GCCA---------------------------------GUCCAA----------------------------------------GCCUCA--------------------CUCACCGGCCG-GAGAGAU--------------------UGAUUCAAGAAUU--UAUUGGGGAUAG---------CCUUC-----------AGGCACAAAGGUUUCCAACAUUUUUCCUAUUUUA---------------CUAAAUGCUGCUUC-UCUUA-GCCA---------------------------------GUCCAA----------------------------------------GCCUCA--------------------CUCACCGGCCG-GAGAGAU--------------------UGAUUCAAGAAUU--UAUUGGGGAUAG---------CCUUC-----------AGGCACAAAGGUUUCCA |
view | Armadillo |
AUGUUUCUUUACUUUUC---------------UUA--UUUUGCUUC-CCUUGAGCAA---------------------------------GCCCAA----------------------------------------GCCUCA--------------------CCCACUGGCAA-GGGAGUU--------------------UGGUUCAGGAAUU--UAUCAAGGAAAG---------CCUUA------------------AGGCUCA---AUGUUUCUUUACUUUUC---------------UUA--UUUUGCUUC-CCUUGAGCAA---------------------------------GCCCAA----------------------------------------GCCUCA--------------------CCCACUGGCAA-GGGAGUU--------------------UGGUUCAGGAAUU--UAUCAAGGAAAG---------CCUUA------------------AGGCUCA---AUGUUUCUUUACUUUUC---------------UUA--UUUUGCUUC-CCUUGAGCAA---------------------------------GCCCAA----------------------------------------GCCUCA--------------------CCCACUGGCAA-GGGAGUU--------------------UGGUUCAGGAAUU--UAUCAAGGAAAG---------CCUUA------------------AGGCUCA--- |
view | Cat |
ACAUUUUUCCCGUUUUA---------------CUAAAUACUGCUUC-UCUCAAGCCU---------------------------------GUCAUG----------------------------------------GCCUCA--------------------CACACUGGUGA-GGGAGAU--------------------UGGUUCAGGGAUU--UAUUGGUGAUAG---------CCUUA-----------AGGCUCCAAGGUU-CCAACAUUUUUCCCGUUUUA---------------CUAAAUACUGCUUC-UCUCAAGCCU---------------------------------GUCAUG----------------------------------------GCCUCA--------------------CACACUGGUGA-GGGAGAU--------------------UGGUUCAGGGAUU--UAUUGGUGAUAG---------CCUUA-----------AGGCUCCAAGGUU-CCAACAUUUUUCCCGUUUUA---------------CUAAAUACUGCUUC-UCUCAAGCCU---------------------------------GUCAUG----------------------------------------GCCUCA--------------------CACACUGGUGA-GGGAGAU--------------------UGGUUCAGGGAUU--UAUUGGUGAUAG---------CCUUA-----------AGGCUCCAAGGUU-CCA |
view | Dog |
ACAUUUUUCCUGCUUUA---------------CUAAAUGCUGCUUC-UCUCAAGCUA---------------------------------GUCGUA----------------------------------------GCCUUA--------------------CCCAUUGGUAG-GGGAGAU--------------------UGGUUCAGGAAUU--UGUUGGUGAUAG---------CCUUA-----------CAGCUCUGUGGUU-GCAACAUUUUUCCUGCUUUA---------------CUAAAUGCUGCUUC-UCUCAAGCUA---------------------------------GUCGUA----------------------------------------GCCUUA--------------------CCCAUUGGUAG-GGGAGAU--------------------UGGUUCAGGAAUU--UGUUGGUGAUAG---------CCUUA-----------CAGCUCUGUGGUU-GCAACAUUUUUCCUGCUUUA---------------CUAAAUGCUGCUUC-UCUCAAGCUA---------------------------------GUCGUA----------------------------------------GCCUUA--------------------CCCAUUGGUAG-GGGAGAU--------------------UGGUUCAGGAAUU--UGUUGGUGAUAG---------CCUUA-----------CAGCUCUGUGGUU-GCA |
view | Elephant |
UUUUUUUUUUUUUUUUC---UAUUUUA-----UUA--UGCUGCUUU-UCUUGAGCAA---------------------------------GUCCAG----------------------------------------GCCUCG--------------------CC-ACUAGCAA-AAGAGAU--------------------UGGGUCAGGGAUU--UGUUGGGGAAGG---------C-UCA------------------AGGGUCUUCAUUUUUUUUUUUUUUUUC---UAUUUUA-----UUA--UGCUGCUUU-UCUUGAGCAA---------------------------------GUCCAG----------------------------------------GCCUCG--------------------CC-ACUAGCAA-AAGAGAU--------------------UGGGUCAGGGAUU--UGUUGGGGAAGG---------C-UCA------------------AGGGUCUUCAUUUUUUUUUUUUUUUUC---UAUUUUA-----UUA--UGCUGCUUU-UCUUGAGCAA---------------------------------GUCCAG----------------------------------------GCCUCG--------------------CC-ACUAGCAA-AAGAGAU--------------------UGGGUCAGGGAUU--UGUUGGGGAAGG---------C-UCA------------------AGGGUCUUCA |
view | Cow |
---UUGUUCCUCUUUUA---------------CUAAAUGCUACUUC-UCUUGAGCCA---------------------------------GUCAAA----------------------------------------ACCUCA--------------------AUGACUGGUGA-CAAAGAU--------------------UGGUUC-GGAAAA--GAUAAGGGGUAGGUAGCCUCAUCUUU-----------GAGCCUCAAGGCUCAAA---UUGUUCCUCUUUUA---------------CUAAAUGCUACUUC-UCUUGAGCCA---------------------------------GUCAAA----------------------------------------ACCUCA--------------------AUGACUGGUGA-CAAAGAU--------------------UGGUUC-GGAAAA--GAUAAGGGGUAGGUAGCCUCAUCUUU-----------GAGCCUCAAGGCUCAAA---UUGUUCCUCUUUUA---------------CUAAAUGCUACUUC-UCUUGAGCCA---------------------------------GUCAAA----------------------------------------ACCUCA--------------------AUGACUGGUGA-CAAAGAU--------------------UGGUUC-GGAAAA--GAUAAGGGGUAGGUAGCCUCAUCUUU-----------GAGCCUCAAGGCUCAAA |
view | Rabbit |
----------------A---------------CUA--UACUGCUUC-UCUUGAGUGA---------------------------------GUCUAA----------------------------------------GCCUCA--------------------ACUCCUAGCCA-GAGAGAU--------------------UGCUUCAGGAAUU--UGUCAGACUUGG---------CCUUA-----------CGUCUCAAGAGUCUGCC----------------A---------------CUA--UACUGCUUC-UCUUGAGUGA---------------------------------GUCUAA----------------------------------------GCCUCA--------------------ACUCCUAGCCA-GAGAGAU--------------------UGCUUCAGGAAUU--UGUCAGACUUGG---------CCUUA-----------CGUCUCAAGAGUCUGCC----------------A---------------CUA--UACUGCUUC-UCUUGAGUGA---------------------------------GUCUAA----------------------------------------GCCUCA--------------------ACUCCUAGCCA-GAGAGAU--------------------UGCUUCAGGAAUU--UGUCAGACUUGG---------CCUUA-----------CGUCUCAAGAGUCUGCC |
view | Guinea Pig |
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view | HedgeHog |
AUAAAUUUUU-GUUUUA---------------UUAAAUGCUGCUUC-UCUUGGUUCA---------------------------------UUCUGA----------------------------------------GCCUUG--------------------CUUAAUGUUGA-ACAGAAG-----------------------------------UUAGAGGGAUAG---------ACUUA-----------AAUGCCAAAGAUCUGCAAUAAAUUUUU-GUUUUA---------------UUAAAUGCUGCUUC-UCUUGGUUCA---------------------------------UUCUGA----------------------------------------GCCUUG--------------------CUUAAUGUUGA-ACAGAAG-----------------------------------UUAGAGGGAUAG---------ACUUA-----------AAUGCCAAAGAUCUGCAAUAAAUUUUU-GUUUUA---------------UUAAAUGCUGCUUC-UCUUGGUUCA---------------------------------UUCUGA----------------------------------------GCCUUG--------------------CUUAAUGUUGA-ACAGAAG-----------------------------------UUAGAGGGAUAG---------ACUUA-----------AAUGCCAAAGAUCUGCA |
view | Mouse |
-------UACAUGUUCC---------------CUC--UACUGCUUCCAUUUGAGACA---------------------------------ACCUGA----------------------------------------GCUUGA--------------------AUUUUUGUUCACGAGACAC--------------------UGGCUGAGUAAGG--UAUC-------------------------------------UCAUCUGUCU----------UACAUGUUCC---------------CUC--UACUGCUUCCAUUUGAGACA---------------------------------ACCUGA----------------------------------------GCUUGA--------------------AUUUUUGUUCACGAGACAC--------------------UGGCUGAGUAAGG--UAUC-------------------------------------UCAUCUGUCU----------UACAUGUUCC---------------CUC--UACUGCUUCCAUUUGAGACA---------------------------------ACCUGA----------------------------------------GCUUGA--------------------AUUUUUGUUCACGAGACAC--------------------UGGCUGAGUAAGG--UAUC-------------------------------------UCAUCUGUCU--- |
view | Shrew |
ACAGUUUUCC-AGCUCU---------------ACGACUGGACUUUU-UUCCAGUUCAGACACCGUCACCUGGCAUUUCCCUAGAGAGAGACUCUGACCUCAUCCAGCUCAAAGGAGUCACGUUUCCCCAUCCAGCUGACUUGUCAGUAUUAAAAACAACAAGCCCAGUGUCCA-GCAAGAAAUGCCGCUUAUCUCAAGCAACAGUCCAAGUCUUACUCAUGGCAAGAG---------ACUCGUUCAGGAAGGUAGUGGGGACGGCCUUCAACAGUUUUCC-AGCUCU---------------ACGACUGGACUUUU-UUCCAGUUCAGACACCGUCACCUGGCAUUUCCCUAGAGAGAGACUCUGACCUCAUCCAGCUCAAAGGAGUCACGUUUCCCCAUCCAGCUGACUUGUCAGUAUUAAAAACAACAAGCCCAGUGUCCA-GCAAGAAAUGCCGCUUAUCUCAAGCAACAGUCCAAGUCUUACUCAUGGCAAGAG---------ACUCGUUCAGGAAGGUAGUGGGGACGGCCUUCAACAGUUUUCC-AGCUCU---------------ACGACUGGACUUUU-UUCCAGUUCAGACACCGUCACCUGGCAUUUCCCUAGAGAGAGACUCUGACCUCAUCCAGCUCAAAGGAGUCACGUUUCCCCAUCCAGCUGACUUGUCAGUAUUAAAAACAACAAGCCCAGUGUCCA-GCAAGAAAUGCCGCUUAUCUCAAGCAACAGUCCAAGUCUUACUCAUGGCAAGAG---------ACUCGUUCAGGAAGGUAGUGGGGACGGCCUUCA |
view | Rat |
---------CAUGAUUC---------------CUG--UACUGCUUCCUUUUGAUACA---------------------------------AUCCAA----------------------------------------GCUUGA--------------------UUUACUGUCCAAGAGACAC--------------------UGCCUGAGUAACG--UAUC-------------------------------------UCAGUUGUCU------------CAUGAUUC---------------CUG--UACUGCUUCCUUUUGAUACA---------------------------------AUCCAA----------------------------------------GCUUGA--------------------UUUACUGUCCAAGAGACAC--------------------UGCCUGAGUAACG--UAUC-------------------------------------UCAGUUGUCU------------CAUGAUUC---------------CUG--UACUGCUUCCUUUUGAUACA---------------------------------AUCCAA----------------------------------------GCUUGA--------------------UUUACUGUCCAAGAGACAC--------------------UGCCUGAGUAACG--UAUC-------------------------------------UCAGUUGUCU--- |
view | Tenrec |
GUGUUUUUUUUGUUUUC---CAUUUUA-----UUA--UGCUACUCU-UCUUGAGCAA---------------------------------GUCCAA----------------------------------------GCUUCA--------------------GC-ACUGGCAA-AAGAGAC--------------------AGGGUCAAGGAUU--UGUGGGGUAAGG---------U-UCA-------------------GGGUUAUCGGUGUUUUUUUUGUUUUC---CAUUUUA-----UUA--UGCUACUCU-UCUUGAGCAA---------------------------------GUCCAA----------------------------------------GCUUCA--------------------GC-ACUGGCAA-AAGAGAC--------------------AGGGUCAAGGAUU--UGUGGGGUAAGG---------U-UCA-------------------GGGUUAUCGGUGUUUUUUUUGUUUUC---CAUUUUA-----UUA--UGCUACUCU-UCUUGAGCAA---------------------------------GUCCAA----------------------------------------GCUUCA--------------------GC-ACUGGCAA-AAGAGAC--------------------AGGGUCAAGGAUU--UGUGGGGUAAGG---------U-UCA-------------------GGGUUAUCG |
view | Opossum |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Platypus |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Chicken |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Lizard |
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view | Frog |
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view | Zebrafish |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Stickleback |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Tetradon |
========================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================================== |
view | Fugu |
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view | Medaka |
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