ID: uc009acq.21
GENE: Gigyf1(22)
chr5:137966538-137966707+


(4)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(20)
BRAIN 		(4)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(11)
EMBRYO 		(12)
ESC 		(2)
FIBROBLAST 		(1)
HEART 		(2)
KIDNEY 		(5)
LIVER 		(1)
LYMPH 		(13)
OTHER 		(7)
OTHER.mut 		(2)
PANCREAS 		(1)
PIWI.ip 		(1)
PIWI.mut 		(2)
SKIN 		(4)
SPLEEN 		(18)
TESTES 		(4)
THYMUS 		(1)
UTERUS

Sense strand
CCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCA
....................................................((((((....(((.((((((...........)))))).)))....))))))...................................................................
..................................................51...........................................................112........................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverWT1()
Liver Data. (liver)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverWT3()
Liver Data. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR073955(GSM629281)
total RNA. (blood)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059768(GSM562830)
Treg_control. (spleen)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR060845(GSM561991)
total RNA. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR206942(GSM723283)
other. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR206939(GSM723280)
other. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)
..................................................GTGGAGTCTTGTGGGACCTGGG..................................................................................................22185.0085.00-17.00--1.0017.004.001.002.007.009.00-1.001.001.003.001.001.002.001.00---1.003.00--1.00-1.00-2.00---------1.00-3.00---1.00---------------1.00----------1.00-------------1.00---------------
..................................................GTGGAGTCTTGTGGGACCTGG...................................................................................................21158.0058.002.002.00-18.002.00-3.001.001.00--1.001.002.001.00-1.001.001.00--2.00--1.00-2.00--3.00--2.00--1.00-1.00-2.00-1.00--------2.00------1.00--------1.00------------------------1.00--------1.00---
......................................................................................AGGGCTCTCCTGACTCTGTCCT..............................................................22124.0024.0010.00-----1.001.00------------6.00------------2.00--------2.00-------------------------------------------------1.00-1.00---------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTAG..................................................70121.0021.00--21.00-----------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGA.................................................................................................23119.0085.003.002.00--2.00--1.005.00--1.00----------------------1.00--1.00---1.00-------------2.00------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGT.................................................................................................23118.0085.00-1.00--1.00-2.002.00---2.00-1.00--1.00-1.001.00--1.00---------1.00----1.00----1.00---1.00-------------------------------1.00-------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCC...............................................................21116.0016.008.00---3.00-1.00---------------------------------------1.00------1.00--------1.00-----------------------------------1.00-----
.............................................................................AGGATGTCCAGGGCTCTC...........................................................................18115.0015.00-------1.00------1.001.00---------3.001.00-2.00-2.00---1.001.00-----------1.00-------------1.00------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGC.............................................................................................27110.0010.00-1.00-------6.00---1.00-1.00---1.00------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGA..................................................................................................22110.0058.00--------1.00--3.002.00-1.00--1.00-----1.00---------------------------------------------------------------------------1.00----
.....................................................................................CAGGGCTCTCCTGACTCTGTCC...............................................................2218.008.001.001.00--1.00----------------------------------------------------1.00--1.00-----------------------1.00-1.00------1.00----------
...................................................TGGAGTCTTGTGGGACCTGGGGAGGC.............................................................................................2616.006.00----------------1.00--------1.002.00---------1.00-----------------1.00-------------------------------------------------
.............................................................................AGGATGTCCAGGGCTCTCC..........................................................................1915.005.00-------1.00-------1.00------------1.00---1.00-----1.00-----------------------------------------------------------------
..............................................................................GGATGTCCAGGGCTCTC...........................................................................1715.005.00-------1.00--------------------2.00------1.00--------1.00-----------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTT.............................................................2314.0024.003.00-------------1.00-----------------------------------------------------------------------------------------
.............................................................TGGGACCTGGGGAGGCAGGATGTCC....................................................................................2514.004.00---4.00----------------------------------------------------------------------------------------------------
..........................................................TTGTGGGACCTGGGGAGGC.............................................................................................1914.004.00-----------------1.00------------------1.00---------------------2.00---------------------------------------------
.............................................................TGGGACCTGGGGAGGC.............................................................................................1624.004.00---1.00---------0.50---0.500.501.00----------------------------------------------------------------------------------0.50-
......................................................................................AGGGCTCTCCTGACTCTGTCT...............................................................2114.001.00------------1.00--------------1.00--------------------1.00-------------------1.00-----------------------------------
...................................................TGGAGTCTTGTGGGACCTGGGGAGGCAGG..........................................................................................2914.004.00---------------------1.00------------------2.00----------------------------------------1.00----------------------
...................................................TGGAGTCTTGTGGGACCTGGGG.................................................................................................2213.003.00---------------------------3.00----------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTG....................................................................................................2013.003.00----1.00-1.00--------------------------------------1.00----------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAAC................................................................................................2413.0058.00-----------------------------------------------------------2.00-----------------1.00--------------------------
..................................................GTGGAGTCTTGTGGGACCTGGT..................................................................................................2213.0058.00----2.00---------------------------------1.00-----------------------------------------------------------------
............................................................GTGGGACCTGGGGAGGCA............................................................................................1813.003.00--------1.00--------1.00----------------------------------------------------------------1.00---------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTAGAAAA..............................................7413.0021.00--3.00-----------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTA...................................................6913.003.00--3.00-----------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGG..............................................................................................2613.003.00---------------------------------------------------1.00---------------1.00---------------------------1.00--------
.............................................................TGGGACCTGGGGAGGCA............................................................................................1713.003.00------2.001.00------------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTTCT................................................................203.000.00-------------------------------------------------2.00-------------------------------------1.00----------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTA.............................................................2313.0024.00-----------1.00---------2.00----------------------------------------------------------------------------------
.............................................................TGGGACCTGGGGAGGCAGGATGTCCAGGGCTC.............................................................................3212.002.00-1.00---------------------------------------------------------------------------------1.00--------------------
..................................................GTGGAGTCTTGTGGGACC......................................................................................................1812.002.00----1.00--------1.00------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGA................................................................................................2412.002.00-------------------2.00------------------------------------------------------------------------------------
...........................................................TGTGGGACCTGGGGAGGC.............................................................................................1812.002.00-2.00------------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAA.................................................................................................2312.0058.00-------1.00--------------1.00---------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGCA................................................................................................2412.0085.00--------2.00-----------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGTA................................................................................................2412.0085.00-----------1.00--1.00-----------------------------------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTGT.................................................................2012.002.001.00----------------------1.00--------------------------------------------------------------------------------
..............................................................................GGATGTCCAGGGCTCTCC..........................................................................1812.002.00------------------------------2.00-------------------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTGTCCT..............................................................2312.002.00------------1.00-----------------------------------1.00-------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTTT...............................................................2112.001.001.00-----------------------------------------------------------------------------------------1.00-------------
..................................................GTGGAGTCTTGTGGGACCTGA...................................................................................................2112.003.00----------------------------------1.00----1.00----------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTGTCA...............................................................2212.001.00----------------------------------------------------2.00---------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGG.................................................................................................2312.002.00-------------1.00-------1.00----------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAG.................................................................................................2312.0058.00------1.00-------------------------------------1.00-----------------------------------------------------------
.............................................................TGGGACCTGGGGAGGCAGG..........................................................................................1911.001.00------------------------------------1.00-------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTTTT................................................................201.000.00-------1.00------------------------------------------------------------------------------------------------
............................................................GTGGGACCTGGGGAGGCAGGATGTCCAGGGC...............................................................................3111.001.00-------------------------1.00------------------------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTTTT................................................................211.000.00---------------------------------------------1.00----------------------------------------------------------
........................................GCAGCAGCAGGTGGAGCTCA..............................................................................................................201.000.00---------------------------------------------------------------------1.00----------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGATTT...............................................................................................2511.0058.001.00-------------------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTC.............................................................2311.001.001.00-------------------------------------------------------------------------------------------------------
...................................................TGGAGTCTTGTGGGACC......................................................................................................1711.001.00---------------------------------1.00----------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTG.............................................................2311.0024.00----1.00---------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGAAA...............................................................................................2511.0085.00----------------------1.00---------------------------------------------------------------------------------
.........................................................................AGGCAGGATGTCCAGGGCTCTC...........................................................................2211.001.00---------------------------------------------------1.00----------------------------------------------------
.........................................................................AGGCAGGATGTCCAGGGCTC.............................................................................2011.001.00--------------------------------------------------------1.00-----------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTTTTT...............................................................221.000.00-----------------------------------------------------1.00--------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTGAT................................................................211.000.001.00-------------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGATT................................................................................................2411.0058.00------------------1.00-------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAGT................................................................................................2411.0058.00-------1.00------------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTTT............................................................2411.0024.00-------------------------------------------------------------------------1.00------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCA............................................................................................2811.001.00-----------------------------------------------------------------------1.00--------------------------------
......................................................................................AGGGCTCTCCTGACTCTACTT...............................................................211.000.00-------------------------------1.00------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGTAG.................................................................................................2311.003.00----------------------1.00---------------------------------------------------------------------------------
...................................................TGGAGTCTTGTGGGACCTGGGGA................................................................................................2311.001.00-------------------------------1.00------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGTAT................................................................................................2411.0058.00-1.00------------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTAA...................................................................................................211.000.00------1.00-------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGTCA...............................................................................................2511.0085.00----------------------1.00---------------------------------------------------------------------------------
.......................................................GTCTTGTGGGACCTGGGGAGGC.............................................................................................2211.001.00------------------------1.00-------------------------------------------------------------------------------
...................................................TGGAGTCTTGTGGGACCTGG...................................................................................................2011.001.00-----------------1.00--------------------------------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTTTTA...............................................................221.000.00------------1.00-------------------------------------------------------------------------------------------
...........................................................................................................................GCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTT............3511.001.00----------------------------------------------------------------1.00---------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGC..................................................................................................2211.0058.00----1.00---------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGTT................................................................................................2411.0085.00--------------1.00-----------------------------------------------------------------------------------------
........................................................TCTTGTGGGACCTGGGGAGGC.............................................................................................2111.001.00----------------------------------1.00---------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGT.................................................................1911.001.00------------------------------------------------------------------------------------------------1.00-------
...................................................................................TCCAGGGCTCTCCTGACTCTTT.................................................................221.000.00---------------------------------------------------------------------------1.00----------------------------
..................................................GTGGAGTCTTGTGGGACCTGAA..................................................................................................2211.003.00-----------------------------------------------------------------1.00--------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAAGC...............................................................................................2511.0058.00----1.00---------------------------------------------------------------------------------------------------
...........................................................................................................................GCCTGGCTGAGCAGCGTT.............................181.000.00----------------------------------------------------------------------1.00---------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAAAA...............................................................................................2511.0058.00-----------------------1.00--------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTAGAA................................................7211.0021.00--1.00-----------------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTC................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAGC................................................................................................2411.0058.00---------------------------------1.00----------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGTTA................................................................................................2411.0058.00----------------------1.00---------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGAA................................................................................................2411.0085.00-------1.00------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGAAG...............................................................................................2511.0085.00--------1.00-----------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAC.................................................................................................2311.0058.00-------1.00------------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCA...............................................................2111.001.00-----------------------------------------------------------------------------------------------------1.00--
......................................................................................AGGGCTCTCCTGACTCTGTCCTAA............................................................2411.0024.00-----------------------1.00--------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAGGCAGGA.........................................................................................3111.001.00--------------------------------------------------------------------------------1.00-----------------------
......................................................................................AGGGCTCTCCTGACTCTGTCCTGA............................................................2411.0024.00-----------------------1.00--------------------------------------------------------------------------------
......................................................AGTCTTGTGGGACCTGGGA.................................................................................................191.000.00-----------------------------------1.00--------------------------------------------------------------------
.............................................................................AGGATGTCCAGGGCTCT............................................................................1711.001.00-------1.00------------------------------------------------------------------------------------------------
........................................................................................................................................GCACCTCCCTACAGACAGCC..............2011.001.00------------1.00-------------------------------------------------------------------------------------------
..........................................................TTGTGGGACCTGGGGAGGCA............................................................................................2011.001.00------------------------------1.00-------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGGGAG...............................................................................................2511.001.00--------------------------------------------------------1.00-----------------------------------------------
............................................................................CAGGATGTCCAGGGCTCTC...........................................................................1911.001.00---------------1.00----------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGAGA................................................................................................2411.0058.00-----------------------------1.00--------------------------------------------------------------------------
...................................................TGGAGTCTTGTGGGACCTGGGGGG...............................................................................................2411.003.00--------------------------------------1.00-----------------------------------------------------------------
.....................................................................................CAGGGCTCTCCTGACTCTGTC................................................................2111.001.001.00-------------------------------------------------------------------------------------------------------
..................................................GTGGAGTCTTGTGGGACCTGGTT.................................................................................................2311.0058.00------------1.00-------------------------------------------------------------------------------------------
......................................................................................AGGGCTCTCCTGACTCTGTCTT..............................................................2211.001.00-------------------------------------------------------------------------------------------------1.00------
............................................................GTGGGACCTGGGGAGGC.............................................................................................1711.001.00----------------1.00---------------------------------------------------------------------------------------
..........................................................TTGTGGGACCTGGGGAGG..............................................................................................1811.001.00----------------------------------------1.00---------------------------------------------------------------
..............................................................GGGACCTGGGGAGGCA............................................................................................1640.500.50------------------------0.25------------------------------------0.25------------------------------------------
.............................................................................AGGATGTCCAGGGCTC.............................................................................1640.500.50----0.25---------------------------------------0.25-----------------------------------------------------------
....CCAACAGCGGCAGCAGCAG...................................................................................................................................................1930.330.33------------------------------------------------------------0.33-------------------------------------------
..................................................GTGGAGTCTTGTGGGA........................................................................................................1680.120.12----0.12---------------------------------------------------------------------------------------------------
...........................................................TGTGGGACCTGGGGAG...............................................................................................1680.120.12-0.12------------------------------------------------------------------------------------------------------

Antisense strand
CCAGCCAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGTGGAGTCTTGTGGGACCTGGGGAGGCAGGATGTCCAGGGCTCTCCTGACTCTGTCCTCTTTTGCCTTAGGAGGCCTGGCTGAGCAGCACCTCCCTACAGACAGCCTTTCAGGCCAACCA
....................................................((((((....(((.((((((...........)))))).)))....))))))...................................................................
..................................................51...........................................................112........................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverWT1()
Liver Data. (liver)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverWT3()
Liver Data. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR073955(GSM629281)
total RNA. (blood)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059768(GSM562830)
Treg_control. (spleen)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR073954(GSM629280)
total RNA. (blood)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR060845(GSM561991)
total RNA. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR206942(GSM723283)
other. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR206939(GSM723280)
other. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)
.........................................................................................................................................CACCTCCCTACAGACAG................ 1712.002.00----------------1.00-1.00-------------------------------------------------------------------------------------
...................................................................................................................................GAGCAGCACCTCCCTACAGACA................. 2211.001.00----------------1.00---------------------------------------------------------------------------------------
...........................................................................................................................................CCTCCCTACAGACAGCC.............. 171.000.00------------------------------------------------------------------------1.00-------------------------------
.........................................................................................................................................CACCTCCCTACAGACAGC............... 1811.001.00----------------------------------------------------------------------------1.00---------------------------
.....................................................................................................................................GCAGCACCTCCCTACAGACAGCCTT............ 2511.001.00-------------------------------------------------------------------------------1.00------------------------
................................................................................ATGTCCAGGGCTCTCGACT....................................................................... 191.000.00-----------------------------------------------------------------------------------------1.00--------------
....................................................................................................TCTGTCCTCTTTTGCCTTAGGAG............................................... 2311.001.00------1.00-------------------------------------------------------------------------------------------------
...........................................................................................................................................CCTCCCTACAGACAGATG............. 181.000.00-------------------------------------------------------------------------------------1.00------------------
......................................................................................................................................CAGCACCTCCCTACAGACAGCCTT............ 2411.001.00------------------------------------------------------1.00-------------------------------------------------
.................................AGCAGCAGCAGCAGCAGGTGGAG.................................................................................................................. 2320.500.50-------------------------------------------------------------------------------------------------------0.50
.......ACAGCGGCAGCAGCAGCAG................................................................................................................................................ 1980.120.12--------------------------------------------------------------0.12-----------------------------------------