ID: uc011maw.1
GENE: GOLGA2(2)
chr9:131019937-131020118-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(2)
AGO2.ip
(1)
AGO3.ip
(1)
B-CELL
(1)
BRAIN
(12)
BREAST
(36)
CELL-LINE
(6)
CERVIX
(1)
FIBROBLAST
(7)
HEART
(1)
HELA
(4)
LIVER
(2)
OTHER
(2)
RRP40.ip
(34)
SKIN
(1)
TESTES
(1)
XRN.ip

Sense strand
GGAACTGGAACATCGCTGCATCCAGCTTTCTGGAGAGACAGACACCATTGGTGAGTGGGAGGCCAGGGCACGGCAGGAGGAGCTGCACAGCGGTCGGAGGGAACCCAGCATCTGAGCCCTGTCCTCCCGCAGGAGAGTACATTGCACTGTACCAGAGCCAGAGGGCAGTGCTGAAGGAGCGG
......................................................((((((((.((((((...((((......)))).......(((((((....))....))))))))))).))))))))....................................................
..................................................51...............................................................................132................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040016(GSM532901)
G645N. (cervix)
TAX577741(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGT.................................................2266.000.007.00-3.003.001.004.00-1.00-3.001.00-1.002.001.002.002.001.001.001.001.003.00--1.00-----1.002.002.00--1.001.00---2.00-------1.00----1.001.00------1.00--1.001.001.00--1.00--1.00---1.00----1.001.00-1.001.00--1.00-1.00-------1.00-1.00--------
................................................................................................................TGAGCCCTGTCCTCCCGCAGT.................................................2159.000.0016.00-6.003.004.003.004.002.001.001.00-2.001.002.00-2.00------1.001.00-------------------------1.00--------1.001.001.00----------------------1.00--1.00----1.00--1.00-1.001.00-----------
................................................................................................................TGAGCCCTGTCCTCCCGCAGA.................................................2118.000.002.00--1.001.001.001.001.003.00-3.002.00--1.00-------1.00---------------------------------------------1.00----------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGA.................................................2216.000.006.00-1.00---2.00---1.00-------2.00---------1.00------1.00---------1.00-----------1.00---------------------------------------------------
.....................................................................................................................................................TACCAGAGCCAGAGGGCAGTGTGGA........259.000.00-9.00-----------------------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGAA...........................................................................................................225.000.00---------------------------------2.00---------2.00-------1.00---------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTAA...............................................235.000.00------------1.00------1.00---1.00-1.00----------------------------------------------------------------------------1.00------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTTT...............................................234.000.00--------------1.00-----1.00----------------2.00-----------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCAT..........................................................................................................234.000.001.00-------------------1.00-1.00--------------------------------------------1.00-----------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTA................................................223.000.00------1.00----1.00-1.00-----------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGTA................................................233.000.00--1.00-------1.00----------------1.00---------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGTAA...............................................243.000.00---------------------------1.00----------------------1.00-----------------------------------------1.00----------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGC.................................................213.000.00--1.00----1.00---------------------------------------------------------------1.00-------------------------------------
..............................................................................................................TCTGAGCCCTGTCCTCCCGCAGT.................................................233.000.00---------------1.00-------------------------1.00----1.00--------------------------------------------------------------
.....................CCAGCTTTCTGGAGAGACA..............................................................................................................................................1913.003.00-3.00-----------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCATT.................................................213.000.00---1.001.00-1.00------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGAA................................................222.000.00-------1.00---1.00-------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTAG...............................................232.000.00--1.00---------1.00------------------------------------------------------------------------------------------------
..............................................................................................................TCTGAGCCCTGTCCTCCCTAG...................................................212.000.00----------------------------------2.00--------------------------------------------------------------------------
..................................................................................................................................................CTGTACCAGAGCCAGAGGG.................1922.002.00-2.00-----------------------------------------------------------------------------------------------------------
..................................................................................CTGCACAGCGGTCGGA....................................................................................1612.002.002.00------------------------------------------------------------------------------------------------------------
...........................................................................GGAGGAGCTGCACAGCGGTCGGA....................................................................................2312.002.002.00------------------------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGAA................................................232.000.00--------------------------------------2.00----------------------------------------------------------------------
...............................................................................................................................................................AGAGGGCAGTGCTGAAGGAGCG.2212.002.00---------------------------------------2.00---------------------------------------------------------------------
...............................................................................................................................................................AGAGGGCAGTGCTGAAGGAGC..2112.002.00--------------------------2.00----------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAT..................................................202.000.00--------------------------------------------1.00------------------1.00---------------------------------------------
.............................................................................................TCGGAGGGAACCCAGGGC.......................................................................182.000.00-----------------2.00-------------------------------------------------------------------------------------------
.....................................................................................................................................................TACCAGAGCCAGAGGG.................1631.331.33-1.33-----------------------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCCGT.................................................221.000.00--1.00----------------------------------------------------------------------------------------------------------
.............................................................................................................................................TTGCACTGTACCAGAGC........................1711.001.00--------------1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................TTGCACTGTACCAGAGCCAGAGGGCAG..............2711.001.00--------------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................TACATTGCACTGTACCAGAGCCAGAGGGCA...............3011.001.00-1.00-----------------------------------------------------------------------------------------------------------
..............................................................................GGAGCTGCACAGCGGTCGGAGGGAACCCAGCAT.......................................................................3311.001.00-----1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TACCAGAGCCAGAGGGCAGTGTG..........231.000.00-1.00-----------------------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCAA..........................................................................................................231.000.00------------------------------------1.00------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAAAAA...............................................241.000.00---------------------------------------------------------------------------------------------------1.00---------
.....................................................AGTGGGAGGCCAGGGCACGGCAAT.........................................................................................................241.000.00--------------------------------------------------------------1.00----------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCGA..................................................201.000.00-------1.00-----------------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCAAAA........................................................................................................251.000.00-------------------------------------------------------------------------1.00-----------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAAT.................................................211.000.00------------------------------------------------------------------------------1.00------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTAAA..............................................241.000.00--------1.00----------------------------------------------------------------------------------------------------
.............................................................................................TCGGAGGGAACCCAGCATCTGAGA.................................................................241.000.00---------------------------------------------------------------------------------------1.00---------------------
...............................................................................................................................................................AGAGGGCAGTGCTGAAGGAG...2011.001.00-----------------------------------------------------------------------------------------------------1.00-------
.....................................................AGTGGGAGGCCAGGGCACGGCCT..........................................................................................................231.000.00-----------------------------------------1.00-------------------------------------------------------------------
...................................................................................TGCACAGCGGTCGGACAT.................................................................................181.000.00----------------------------------------------------------------------1.00--------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAA..................................................211.000.00------------------------------1.00------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCAC..........................................................................................................231.000.001.00------------------------------------------------------------------------------------------------------------
.........................................................................CAGGAGGAGCTGCACAGCGGTCGGAGGGAA...............................................................................3011.001.00--------------------------------------------------------------------------------1.00----------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGC.................................................221.000.00------------1.00------------------------------------------------------------------------------------------------
........................................................................................................................................................CAGAGCCAGAGGGCAGTGCTGAAGGA....2611.001.00-1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTAT...............................................231.000.00-------------------------------------------------------------------------------1.00-----------------------------
.............................................................................................................ATCTGAGCCCTGTCCTCCCGCAT..................................................231.000.00----------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................AGGGCAGTGCTGAAGGAGCGG2111.001.00-----------------------------1.00-------------------------------------------------------------------------------
.........................................................................................................................................TACATTGCACTGTACCAGAGCCAGAGG..................2711.001.00-1.00-----------------------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGTT................................................231.000.00---------------------------------------------------------------------------------------------1.00---------------
..............................................................................................................TCTGAGCCCTGTCCTCCCGCAGTT................................................241.000.00---------1.00---------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCATAT................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGCA................................................221.000.00--------------------------------------------------------1.00----------------------------------------------------
.......................................................................................CAGCGGTCGGAGGGAACCCAGCATCTGAG..................................................................2911.001.00-----------------------------1.00-------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCATA.........................................................................................................241.000.00---------1.00---------------------------------------------------------------------------------------------------
..............................................................CCAGGGCACGGCAGGAGGAGC...................................................................................................2111.001.00----------------------------1.00--------------------------------------------------------------------------------
.....................................................................................................................................................TACCAGAGCCAGAGGGCAG..............1921.001.00-1.00-----------------------------------------------------------------------------------------------------------
..........................TTTCTGGAGAGACAGACAGACC......................................................................................................................................221.000.00-----------------------------------------------------------------------------------------1.00-------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGAT................................................221.000.00----1.00--------------------------------------------------------------------------------------------------------
.............................................................................................................ATCTGAGCCCTGTCCTCCCGAG...................................................221.000.00----------------1.00--------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGA............................................................................................................211.000.00----------------------------------------------------1.00--------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAAA.................................................221.000.00-------------------------------------------------------1.00-----------------------------------------------------
......................................................................................ACAGCGGTCGGAGGGAACCCAGC.........................................................................2311.001.00------------------------------------------1.00------------------------------------------------------------------
..................................................................................................GGGAACCCAGCATCTGAGCCCTG.............................................................2311.001.00--------------------------------------------------------------------------1.00----------------------------------
..........................TTTCTGGAGAGACAGACACCATTGGAGA................................................................................................................................281.000.00-1.00-----------------------------------------------------------------------------------------------------------
................................................................AGGGCACGGCAGGAGGAGCT..................................................................................................2011.001.00-----------------------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................ACATTGCACTGTACCAGAGCCAGAGGG.................2711.001.00-----------------1.00-------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGAAAA..............................................241.000.00-------------------------1.00-----------------------------------------------------------------------------------
..............................................................................................................TCTGAGCCCTGTCCTCCCGCAGTA................................................241.000.00------------------------------------------1.00------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGTAC...............................................241.000.00--------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGA....................................................191.000.00------------------------1.00------------------------------------------------------------------------------------
................................................................AGGGCACGGCAGGAGGAGCTGCACAGCGGTC.......................................................................................3111.001.00-------------------1.00-----------------------------------------------------------------------------------------
.......................................................TGGGAGGCCAGGGCACGGCATT.........................................................................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAT..................................................211.000.00-----------------------------------------------------------------------------1.00-------------------------------
..........................................................................................................AGCATCTGAGCCCTGTAAG.........................................................191.000.00----------------1.00--------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCG...........................................................................................................221.000.00---1.00---------------------------------------------------------------------------------------------------------
................................................................................................................TGAGCCCTGTCCTCCCGCAGTT................................................221.000.00-----------------------------------------------1.00-------------------------------------------------------------
...............................................................................................................CTGAGCCCTGTCCTCCCGCAGAAT...............................................241.000.00----1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................TCTGAGCCCTGTCCTCCCGCAGA.................................................231.000.00------------------1.00------------------------------------------------------------------------------------------
.....................................................AGTGGGAGGCCAGGGCACGGCTTCT........................................................................................................251.000.00---------------------------------------------------------------------------1.00---------------------------------
....................................GACAGACACCATTGGAGA................................................................................................................................181.000.00-1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................................................................ACTGTACCAGAGCCAGAGG..................1920.500.50-0.50-----------------------------------------------------------------------------------------------------------
................................................................................................................................................CACTGTACCAGAGCCAGAGG..................2020.500.50--------------------------------------------------------------------------------------------------------0.50----
................................................................................................................................................CACTGTACCAGAGCCAGAGGG.................2120.500.50-------------------------------------------------------------------------------------------------------0.50-----
.........................................................................................................CAGCATCTGAGCCCTGTCCTCCCGCA...................................................2620.500.50--------0.50----------------------------------------------------------------------------------------------------
............................................................................................GTCGGAGGGAACCC............................................................................1470.290.29--------------------------------------------0.14--------------------------------------------------------------0.14-
..................................GAGACAGACACCATTG....................................................................................................................................1640.250.25---------------------------------------------------------------------------------------------------------0.25---
....................................................................................GCACAGCGGTCGG.....................................................................................1350.200.20------------0.20------------------------------------------------------------------------------------------------
........................................................................................AGCGGTCGGAGGG.................................................................................1350.200.20----------------------------------------------------------------------------------------------------------0.20--
.....................................................................ACGGCAGGAGGAGC...................................................................................................1470.140.14-------------------------------------------------------------------------------------------------------0.14-----
.......................................................................................CAGCGGTCGGAGG..................................................................................1370.140.14-----------------------0.14-------------------------------------------------------------------------------------
.....................................................................................................................................................TACCAGAGCCAGAGG..................1590.110.11-0.11-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................CATTGCACTGTACCA............................15100.100.10------------------------0.10------------------------------------------------------------------------------------

Antisense strand
GGAACTGGAACATCGCTGCATCCAGCTTTCTGGAGAGACAGACACCATTGGTGAGTGGGAGGCCAGGGCACGGCAGGAGGAGCTGCACAGCGGTCGGAGGGAACCCAGCATCTGAGCCCTGTCCTCCCGCAGGAGAGTACATTGCACTGTACCAGAGCCAGAGGGCAGTGCTGAAGGAGCGG
......................................................((((((((.((((((...((((......)))).......(((((((....))....))))))))))).))))))))....................................................
..................................................51...............................................................................132................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR553576(SRX182782)
source: Testis. (testes)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
DRR000561(DRX000319)
Isolation of RNA following immunoprecipitatio. (ago2 cell line)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
DRR000562(DRX000320)
Isolation of RNA following immunoprecipitatio. (ago3 cell line)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
DRR000559(DRX000317)
THP-1 whole cell RNA, no treatment. (cell line)
DRR000560(DRX000318)
Isolation of RNA following immunoprecipitatio. (ago1 cell line)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189782SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR095854(SRX039177)
miRNA were isolated from FirstChoice Human Br. (brain)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
SRR037939(GSM510477)
293cand5_rep1. (cell line)
SRR189784SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
TAX577590(Rovira)
total RNA. (breast)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189786SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR037940(GSM510478)
293cand5_rep2. (cell line)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR029131(GSM416760)
MCF7. (cell line)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR343333(GSM796036)
KSHV (HHV8). (cell line)
SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR037937(GSM510475)
293cand2. (cell line)
SRR040007(GSM532892)
G601T. (cervix)
SRR040010(GSM532895)
G529N. (cervix)
SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR037936(GSM510474)
293cand1. (cell line)
SRR191603(GSM715713)
71genomic small RNA (size selected RNA from t. (breast)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444040(SRX128888)
Sample 1cDNABarcode: AF-PP-333: ACG CTC TTC C. (skin)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR191551(GSM715661)
32genomic small RNA (size selected RNA from t. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR330909(SRX091747)
tissue: normal skindisease state: normal. (skin)
SRR207118(GSM721080)
RRP40 knockdown. (RRP40 cell line)
TAX577745(Rovira)
total RNA. (breast)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR191622(GSM715732)
175genomic small RNA (size selected RNA from . (breast)
SRR040016(GSM532901)
G645N. (cervix)
TAX577741(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR029128(GSM416757)
H520. (cell line)
SRR191557(GSM715667)
57genomic small RNA (size selected RNA from t. (breast)
SRR191590(GSM715700)
48genomic small RNA (size selected RNA from t. (breast)
SRR038856(GSM458539)
D11. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191573(GSM715683)
68genomic small RNA (size selected RNA from t. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR040036(GSM532921)
G243N. (cervix)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR040028(GSM532913)
G026N. (cervix)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR040014(GSM532899)
G623N. (cervix)
SRR191543(GSM715653)
124genomic small RNA (size selected RNA from . (breast)
SRR033716(GSM497061)
Mentle Cell Lymphoma (MCL114). (B cell)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)
SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
...........................................................AGGCCAGGGCACGGCATTA........................................................................................................ 191.000.00-1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................CGGAGGGAACCCAG.......................................................................... 14100.100.10------------------------------------------------------------------------------------------------------------0.10