ID: uc001jrd.3
GENE: PALD1(3)
chr10:72290846-72291095+


(1)
AGO2.ip 		(9)
B-CELL 		(6)
BRAIN 		(3)
BREAST 		(12)
CELL-LINE 		(3)
CERVIX 		(1)
HEART 		(1)
LIVER 		(2)
OTHER 		(12)
SKIN 		(2)
UTERUS

Sense strand
GGGTCACTGCTGACTGGGAGGGTCACAGGGAGGTAGCATTTGGACTGAGCTTTGTTTCTTGGGTAGGATTCAGGTTGCAGGGATGGTGTGGGGTGCAGGAGGAAGGAACAGCTTGGGCAGAGGCCCTGAGGTGGGGCAGTGGTGCAGGTGTCTGTGCGGGATCATGATGATGGCTTCCTTCCCCCTCGGGCTCCTGGCAGGAGTGTGTCATCTTCTGTGTGCGGGAGGAACCTGTGCTTTTCCTGCGTGC
...............................................................................................................................((((.((((.....((((((....))))))((((((((....)))).)))).))))))))...............................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040036(GSM532921)
G243N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038855(GSM458538)
D10. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGT.................................................22118.001.007.00-------1.001.00----1.002.00--1.00-----------1.00-----1.00------1.00---1.00-1.00---
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAGT.................................................23115.006.009.00----1.00----2.00------------------------1.00-----1.00--------1.00--
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAT..................................................22111.003.00-8.00-2.00---------------------------------1.00---------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAGA.................................................2319.006.004.001.00------------1.00-----------1.00-----------1.001.00-------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGA.................................................2219.001.001.00-----3.00-----1.00----2.00----1.00-1.00----------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGAA................................................2317.001.00--4.00-1.00--1.00-----------------------1.00---------------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAG..................................................2216.006.001.00------1.00----1.00---1.00------1.00---1.00-------------------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAGTT................................................2414.006.004.00----------------------------------------------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCA...................................................2113.003.00---1.001.00-------------------------------------1.00----------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAGAA................................................2413.006.00-----1.00-------1.00--1.00------------------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGTTT...............................................2413.001.00---------------------------------1.00----------1.00-1.00------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGTAA...............................................2412.001.00-----------1.00-------------1.00---------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGTTA...............................................2412.001.00---------1.00-1.00-----------------------------------------
...................................................................................................................................................................ATGATGATGGCTTCCTTGCA...................................................................201.000.00----------------------------1.00------------------------
...............................................................................................................................................................GATCATGATGATGGCTATA........................................................................191.000.00--------1.00--------------------------------------------
....................................................................................................................................................................................CCCCCTCGGGCTCCTGGCAGATT...............................................231.000.00--1.00--------------------------------------------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCATTT................................................2411.003.00-----1.00-----------------------------------------------
..............................AGGTAGCATTTGGACTGAGCTTTGTTTCT...............................................................................................................................................................................................2911.001.00----------------------------------------1.00------------
...................................................................................................................................TGGGGCAGTGGTGCAGCTCT...................................................................................................201.000.00------------------------------------------------1.00----
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAA..................................................2111.001.001.00----------------------------------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGATT...............................................2411.001.00----1.00------------------------------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAG..................................................2111.001.00--1.00--------------------------------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGC.................................................2211.001.00---------------------------------------------------1.00-
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGCAG...................................................201.000.00------------------1.00----------------------------------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGC....................................................2011.001.00--------------------------------1.00--------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCA...................................................2011.001.00-------------1.00---------------------------------------
...................................................................................................................................................................................TCCCCCTCGGGCTCCTGGCAGAT................................................2311.001.00---------------------------------------------1.00-------
..................................................................................................................................................................................TTCCCCCTCGGGCTCCTGGCAGAT................................................2411.006.00-----------------------------1.00-----------------------
.............CTGGGAGGGTCACAGGGGGAT........................................................................................................................................................................................................................211.000.00-------------------1.00---------------------------------
.........................................................................................................................................................................ATGGCTTCCTTCCCCC.................................................................1640.250.25----------------------------------------------------0.25

Antisense strand
GGGTCACTGCTGACTGGGAGGGTCACAGGGAGGTAGCATTTGGACTGAGCTTTGTTTCTTGGGTAGGATTCAGGTTGCAGGGATGGTGTGGGGTGCAGGAGGAAGGAACAGCTTGGGCAGAGGCCCTGAGGTGGGGCAGTGGTGCAGGTGTCTGTGCGGGATCATGATGATGGCTTCCTTCCCCCTCGGGCTCCTGGCAGGAGTGTGTCATCTTCTGTGTGCGGGAGGAACCTGTGCTTTTCCTGCGTGC
...............................................................................................................................((((.((((.....((((((....))))))((((((((....)))).)))).))))))))...............................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR015361(GSM380326)
Memory B cells (MM55). (B cell)		SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)		SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)		SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR033732(GSM497077)
bjab cell line (bjab103). (B cell)		SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR015360(GSM380325)
Plasma B cells (PC137). (B cell)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR029126(GSM416755)
143B. (cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR189784SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR191604(GSM715714)
74genomic small RNA (size selected RNA from t. (breast)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR040036(GSM532921)
G243N. (cervix)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR038855(GSM458538)
D10. (cell line)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		TAX577738(Rovira)
total RNA. (breast)		SRR189782SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		TAX577746(Rovira)
total RNA. (breast)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330886(SRX091724)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040016(GSM532901)
G645N. (cervix)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR094131(GSM651907)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)		GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR040007(GSM532892)
G601T. (cervix)		SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................................................................................GGAGTGTGTCATCTTCTGTGTGCGG.......................... 2511.001.00--------------------1.00--------------------------------
...............GGGAGGGTCACAGGGATTCT....................................................................................................................................................................................................................... 201.000.00----------------------------------1.00------------------
...........................................................................................................................................................................GGCTTCCTTCCCCCTTCA............................................................. 181.000.00---------------------1.00-------------------------------
...........................GGGAGGTAGCATTTGG............................................................................................................................................................................................................... 1630.330.33-------------------0.33---------------------------------