ID: uc001api.1.6
GENE: ENO1(6)
chr1:8927260-8927509-


(2)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(3)
BRAIN 		(7)
BREAST 		(26)
CELL-LINE 		(1)
FIBROBLAST 		(2)
HEART 		(9)
HELA 		(1)
KIDNEY 		(2)
OTHER 		(10)
SKIN 		(1)
XRN.ip

Sense strand
TGGCTGGAGTTGGGCTCTGTCTTAGAGGGGAAAAGCAGTGGTGAGTCCACATAGAATGCTATTTGTATTTCTAGTAACAGTGAAATGGAGGTGTGATGGGGGAGGAGATGGTGCAGAATACAACCCTCAGGGCAGTACAGCAGGAGAAAAGCTGGTGAATCAGAAATGACTTCATTCCACTCGGTTCTCTTCTGTTCTAGCTAAGTTTGGTGCGAACGCCATTCTGGGGGTGTCCCTTGCCGTCTGCAAA
.....................................................................................................................................((.((((.(((((((.((.((((((((((....))).))))..)))))...))))))))))).))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189787DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTTCT....................................................23119.0019.00-4.006.00-3.00-1.001.00-1.00--2.00-------------------------1.00----------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTCT....................................................22112.0012.001.004.00--1.00-2.003.00----------------------------------------------------1.00------
.........................................................................................................................................CAGCAGGAGAAAAGCTGGTGA............................................................................................21110.0010.00---9.00------------------------------1.00--------------------------------
................................................................................................TGGGGGAGGAGATGGTATAG......................................................................................................................................206.000.006.00------------------------------------------------------------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTTC.....................................................2214.004.001.00-3.00----------------------------------------------------------------
.............................................................................................................................................................AATCAGAAATGACTTCATTCCA.......................................................................2214.004.003.00---------------------------------------------1.00--------------------
.................................................................................................................................................................................................................GTGCGAACGCCATTCTGG.......................1814.004.00----------2.00---2.00----------------------------------------------------
..................................................................................................................................................................................ACTCGGTTCTCTTCTGTTCT....................................................2013.003.00--3.00----------------------------------------------------------------
...............................................................................................................................CAGGGCAGTACAGCAGGAG........................................................................................................1913.003.00--------3.00----------------------------------------------------------
.............................................................................................................................................AGGAGAAAAGCTGGTGAATCAGAAATGACTTC.............................................................................3213.003.00-----------2.00-------------------1.00-----------------------------------
................................................................................................TGGGGGAGGAGATGGTGTAG......................................................................................................................................203.000.003.00------------------------------------------------------------------
...................................................................................................................................................................................CTCGGTTCTCTTCTGTTCTAGT.................................................2213.003.00-2.00-------------------------1.00---------------------------------------
.......................................GGTGAGTCCACATAGAATGC...............................................................................................................................................................................................2013.003.00-----2.00---------------------------------1.00---------------------------
...................................................................................................................................................................................CTCGGTTCTCTTCTGTTCTAG..................................................2113.003.00---------1.00--------------------------------1.00-1.00----------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTG........................................................1812.002.001.00--------1.00---------------------------------------------------------
.............................................................................................................................................................................................................TTTGGTGCGAACGCCATTCTGG.......................2212.002.00----------------2.00--------------------------------------------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTG........................................................1912.002.002.00------------------------------------------------------------------
.........................................................................................................................................................................................................TAAGTTTGGTGCGAACGC...............................1812.002.00-------------------------------------------------------1.00---------1.00-
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTCTAT..................................................242.000.00--2.00----------------------------------------------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTC.....................................................2112.002.00-2.00-----------------------------------------------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTCTAG..................................................2412.002.00---------------------------------1.00----------------1.00----------------
......................................................................................................................................................................................................................................TGTCCCTTGCCGTCTGCA..1812.002.00----2.00--------------------------------------------------------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTTCCAG..................................................2512.004.00-------------------2.00-----------------------------------------------
........................................................................................................................................ACAGCAGGAGAAAAGCTGGTGA............................................................................................2212.002.00---------------------2.00---------------------------------------------
................................................................................................................................................AGAAAAGCTGGTGAAT..........................................................................................1681.121.12--0.38-----0.75----------------------------------------------------------
...........................................................................................................................................................................................................AGTTTGGTGCGAACGCCATTCTGGGG.....................2611.001.00-------------1.00-----------------------------------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTT......................................................2011.001.00------1.00------------------------------------------------------------
..............................................................................................................................................................................TTCCACTCGGTTCTCTTCTGTTCT....................................................2411.001.00------1.00------------------------------------------------------------
..............................................................................................................................................................................................................TTGGTGCGAACGCCATTCTGGGG.....................2311.001.00------------------------1.00------------------------------------------
................................................................................................................................AGGGCAGTACAGCAGGAGAAAAGCTGGCG.............................................................................................291.000.00---------------------------------------------1.00---------------------
.......................................................................................................................................TACAGCAGGAGAAAAGCTGGTG.............................................................................................2211.001.00------------------------------1.00------------------------------------
..................................................................................................................................................AAAAGCTGGTGAATCAG.......................................................................................1711.001.00-----------------------------1.00-------------------------------------
...................................................................................................................................................................................................................GCGAACGCCATTCTGGGGG....................1911.001.00--------------------------------------------------------------1.00----
................................................................................................TGGGGGAGGAGATGGTGTAGA.....................................................................................................................................211.000.00-----------------------------------1.00-------------------------------
..................................................................................................................................................................GAAATGACTTCATTCCACTCGGTTCT..............................................................2611.001.00--------------------------------1.00----------------------------------
................................................................................................................GCAGAATACAACCCTCAG........................................................................................................................1811.001.00-------------1.00-----------------------------------------------------
...................................................................................................................................................................................................................................GGGTGTCCCTTGCCGTCCGC...201.000.00------------------1.00------------------------------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTT.....................................................2111.001.00-1.00-----------------------------------------------------------------
.......................................................................................................................................TACAGCAGGAGAAAAGCTGGTGA............................................................................................2311.001.00-------------------------------------1.00-----------------------------
...........................................................................................................................................................................................................AGTTTGGTGCGAACGC...............................1611.001.00---------------------------------------------------------1.00---------
.......................................................................................................................................................................................................................ACGCCATTCTGGGGGTG..................1711.001.00--------------------1.00----------------------------------------------
..................................................................................................................................................................................................................TGCGAACGCCATTCTGGG......................1811.001.00----------------------------------------------------1.00--------------
.....................................................................................................................................................................................CGGTTCTCTTCTGTTCTAG..................................................1911.001.00-----------------------1.00-------------------------------------------
........................................................................................................................................................................................................CTAAGTTTGGTGCGAACGCC..............................2011.001.00-----------------------------------------------1.00-------------------
........................................GTGAGTCCACATAGAATG................................................................................................................................................................................................1811.001.00-----1.00-------------------------------------------------------------
...................................................................................................................................................................................CTCGGTTCTCTTCTGTTCTAGA.................................................2211.003.00-----------------------------------------------------------1.00-------
.......................................................................................................................................TACAGCAGGAGAAAAGCCGGT..............................................................................................211.000.00---------------1.00---------------------------------------------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTT......................................................2111.001.00-1.00-----------------------------------------------------------------
..........................................................................................................................ACCCTCAGGGCAGTACAGCAGGAGAA......................................................................................................2611.001.00--------------------------------------------------------1.00----------
................................................................................................TGGGGGAGGAGATGGTAGTT......................................................................................................................................201.000.00-----------------1.00-------------------------------------------------
.................................................................................................................................................GAAAAGCTGGTGAATTACT......................................................................................191.000.00-----------------------------------------------------1.00-------------
.......................................................................................................................................................................................GTTCTCTTCTGTTCTAGCTAAG.............................................2211.001.00----------------------------------------------------------1.00--------
.......................................................................................................................................................................................................................ACGCCATTCTGGGGGTGTCCCT.............2211.001.00-----------------------------------------1.00-------------------------
................................................................................................................................................................................................................GGTGCGAACGCCATTCTGGGGGTGTC................2611.001.00-------------------------------------------------------------1.00-----
.................................................................................................................................................GAAAAGCTGGTGAATCAGAAATGAC................................................................................2511.001.00-----1.00-------------------------------------------------------------
........................................GTGAGTCCACATAGAATGC...............................................................................................................................................................................................1911.001.00----------------------------------------1.00--------------------------
................................................................................................TGGGGGAGGAGATGGTGTAGT.....................................................................................................................................211.000.00-----------------1.00-------------------------------------------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTTCC....................................................2311.004.00-1.00-----------------------------------------------------------------
.................................................................................................................................................................................................................GTGCGAACGCCATTCTGGGGGTGTCCCTT............2911.001.00------------------------------------------------------1.00------------
...............................................................................................................................................................................TCCACTCGGTTCTCTTCTGTTCTA...................................................2411.001.001.00------------------------------------------------------------------
................................................................................................................................................................................................................................TGGGGGTGTCCCTTGCCG........1811.001.00------------------------------------------------------------------1.00
................................................................................................................................................................................CCACTCGGTTCTCTTCTGTTCCAG..................................................2411.002.00---------------1.00---------------------------------------------------
..................................................................................................................................................................................................................TGCGAACGCCATTCTGGGGGCG..................221.000.00--------------------1.00----------------------------------------------
................................................................................................................................................................................CCACTCGGTTCTCTTCTGT.......................................................1911.001.00----------------------1.00--------------------------------------------
...................................................................................................................................................................................................................GCGAACGCCATTCTGG.......................1611.001.00--------------------------1.00----------------------------------------
......................................................................................................................................................................................................................AACGCCATTCTGGGG.....................1511.001.00----------1.00--------------------------------------------------------
......................................................................................................................................................................................................................AACGCCATTCTGGGGGT...................1711.001.00------------------------------------------------1.00------------------
.................................................................................................................................................................................................................................GGGGGTGTCCCTTGCCGTCT.....2011.001.00-------------------------------------------------1.00-----------------
.................................................................................GAAATGGAGGTGTGATGGGGGAGG.................................................................................................................................................2411.001.00----------------------------------------------------------------1.00--
......................................................................................................................................................................................................................AACGCCATTCTGGGGGTGTC................2011.001.00------------------------------------1.00------------------------------
...........................................................................................................................................................................................................AGTTTGGTGCGAACGCC..............................1711.001.00-------------------------------------------1.00-----------------------
......................................................................................................................................................................................................................AACGCCATTCTGGGGGTG..................1811.001.00------------------1.00------------------------------------------------
...................................................................................................................................................................................................................................GGGTGTCCCTTGCCGTCT.....1811.001.00----------------------------1.00--------------------------------------
.........................................................................................................................................CAGCAGGAGAAAAGCTGGT..............................................................................................1911.001.00-------------------------1.00-----------------------------------------
.GGCTGGAGTTGGGCTCTG.......................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------------1.00---
...CTGGAGTTGGGCTCTGTCTTAGAGGGGAAA.........................................................................................................................................................................................................................3011.001.00-----1.00-------------------------------------------------------------
..............................................................................................................................................GGAGAAAAGCTGGTGAAT..........................................................................................1820.500.50-----------0.50-------------------------------------------------------
....................................................................................................................................CAGTACAGCAGGAGAAA.....................................................................................................1730.330.33-----0.33-------------------------------------------------------------
...........................................................................................................................................................................................................................................CTTGCCGTCTGCAA.14100.100.10----------------------0.10--------------------------------------------

Antisense strand
TGGCTGGAGTTGGGCTCTGTCTTAGAGGGGAAAAGCAGTGGTGAGTCCACATAGAATGCTATTTGTATTTCTAGTAACAGTGAAATGGAGGTGTGATGGGGGAGGAGATGGTGCAGAATACAACCCTCAGGGCAGTACAGCAGGAGAAAAGCTGGTGAATCAGAAATGACTTCATTCCACTCGGTTCTCTTCTGTTCTAGCTAAGTTTGGTGCGAACGCCATTCTGGGGGTGTCCCTTGCCGTCTGCAAA
.....................................................................................................................................((.((((.(((((((.((.((((((((((....))).))))..)))))...))))))))))).))....................................................
....................................................................................................................................133................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR189782GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)		SRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		GSM1105753INPUT(GSM1105753)
small RNA sequencing data. (hela)		DRR001488(DRX001042)
Hela short nuclear cell fraction, LNA(+). (hela)		GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		SRR387909(GSM843861)
specific-host: Homo sapienshost cell line: Su. (cell line)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR037933(GSM510471)
293cand4_rep2. (cell line)		SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR189787DRR001489(DRX001043)
Hela short nuclear cell fraction, control. (hela)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189786SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR191595(GSM715705)
72genomic small RNA (size selected RNA from t. (breast)		SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR037943(GSM510481)
293DcrTN. (cell line)		SRR037934(GSM510472)
293cand4_rep3. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)		GSM956925Ago2PAZ(GSM956925)
cell line: HEK293 cell linepassages: 15-20ip . (ago2 cell line)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR029131(GSM416760)
MCF7. (cell line)		SRR363676(GSM830253)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)		DRR001487(DRX001041)
Hela long nuclear cell fraction, LNA(+). (hela)		DRR001486(DRX001040)
Hela long cytoplasmic cell fraction, LNA(+). (hela)		SRR191576(GSM715686)
86genomic small RNA (size selected RNA from t. (breast)		SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)		SRR191605(GSM715715)
76genomic small RNA (size selected RNA from t. (breast)		RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)		SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR343334SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553575(SRX182781)
source: Kidney. (Kidney)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		SRR444067(SRX128915)
Sample 24cDNABarcode: AF-PP-340: ACG CTC TTC . (cell line)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)		DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR326281(GSM769511)
Dicer mRNA was knocked down using siDicer, cy. (cell line)		SRR191524(GSM715634)
119genomic small RNA (size selected RNA from . (breast)
...........................................................................................TGTGATGGGGGAGGAGATG............................................................................................................................................ 1911.001.00---------------------------------------------------1.00---------------