ID: hsa-mir-6890
GENE: QARS(9)
chr3:49137237-49137443-


(2)
AGO1.ip
(1)
AGO1.ip OTHER.mut
(3)
AGO2.ip
(1)
AGO3.ip
(10)
B-CELL
(7)
BRAIN
(11)
BREAST
(38)
CELL-LINE
(5)
HEART
(4)
HELA
(1)
KIDNEY
(8)
LIVER
(2)
OTHER
(18)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
GTAGCCTATCGAGTCAAGTATACACCACACCACCGCACAGGGGACAAATGGTGGGTGTAGAATGGGGTGGGGTGGTGGGGCTGCCGAGCAGGGCGATGGGCCATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACAGGTGCATCTATCCCACCTACGACTACACACACTGCCTCTGTGACTCCATCG
.......................................................................................................(((((((((((((....(((((.........))))).)))))).))))))).....................................................
................................................................................................97..........................................................157................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR343334SRR038859(GSM458542)
MM386. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR037935(GSM510473)
293cand3. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
.....................................................................................................CATGGGGTAGGGCAGAGTAG......................................................................................20125.0025.001.005.005.003.00-------1.00---3.00-------------1.00-1.00-------1.00------1.00-------------------------------------1.00-----1.00------1.00-------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGG.....................................................................................21124.0024.001.009.001.00---1.00----2.00----1.00-1.00------------1.00----1.00---1.001.00-1.00----------------------1.001.00----------------------------------1.00--------
......................................................................................................ATGGGGTAGGGCAGAGTAGG.....................................................................................20120.0020.003.00---2.003.00--------------1.00-1.001.00-1.00-1.002.00---1.00---------1.00--------------1.00---------------------------------1.001.00------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGC...................................................................................23119.0019.0011.00--1.00-1.00------------1.00----------------1.001.00---------------1.00------------1.00--1.00------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCT..................................................................................24113.0013.004.003.00-2.001.00---------------1.00----1.00-------------------------------------------1.00-----------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGC...................................................................................22111.0011.009.00---1.00-----------------------------------------------------------------------------------1.00----------------------
......................................................................................................ATGGGGTAGGGCAGAGTAG......................................................................................1918.008.00--6.00---2.00--------------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGA.....................................................................................2118.0025.00-5.00------1.00-------------------------------------------------1.00-----------------------------------------1.00----------
...................................................................................................GCCATGGGGTAGGGCAGAGTAG......................................................................................2218.008.00-8.00-------------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCT..................................................................................2318.008.006.00----------------------1.00---------------------------1.00-----------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGG....................................................................................2217.007.005.00---------------1.00--------------------------1.00-------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCAAT................................................................................2415.001.00---------4.00------------------------------------------------------------------1.00----------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGG.....................................................................................2215.005.002.00---------------1.00----------------------1.00-------------------------------------------------------1.00---------------
.......................................................................................................TGGGGTAGGGCAGAGTAGG.....................................................................................1915.005.004.00--------------------------------1.00-----------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGG....................................................................................2114.004.00----1.00-------------1.00-------------------------------------------1.00--------------------1.00---------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGT...................................................................................2214.004.001.00----------------3.00---------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGT........................................................................................1814.004.00--------------------------------1.00----2.00-----------------------------------1.00-------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGA....................................................................................2213.0024.00--------1.00--------------1.00------------------1.00--------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACA...................................................5513.003.00---------------------3.00-----------------------------------------------------------------------------------------
..............................................................................................................GGGCAGAGTAGGGCTGGATGGTAGGG.......................................................................2613.003.00-------------3.00-------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCA..................................................................................2412.0019.00----------------------------------------1.00-------------------------------1.00--------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGA...................................................................................2312.007.00-------------------2.00-------------------------------------------------------------------------------------------
...................ATACACCACACCACCACAG.........................................................................................................................................................................192.000.00----------2.00----------------------------------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGCTA.................................................................................262.000.002.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCATC.2912.002.00-------2.00-------------------------------------------------------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAGT.................................................2122.001.00---------------------------------------------0.50---------------------------------------0.50---------------------0.500.50--
......................................................................................................ATGGGGTAGGGCAGAGT........................................................................................1712.002.00--------------------------2.00------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGA...................................................................................2212.004.00------------------------1.00-------------1.00------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCGA.................................................................................2312.001.002.00--------------------------------------------------------------------------------------------------------------
........................................................................................................................................CCCACTGCCTATGCCCCACAGT.................................................222.000.00---------------------------------------------1.00----------------------------------------1.00------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAG......................................................................................2112.002.00-------------------1.00------------------------------------------------------------------------------1.00------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGA...................................................................................242.000.00----1.00---------------------------------------------------------------------1.00------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGA....................................................................................2112.0020.00----------------------------------2.00----------------------------------------------------------------------------
.................................CGCACAGGGGACAAATG.............................................................................................................................................................1712.002.00-------------------------------------------------------------1.00-------------------------1.00-----------------------
.........................................................................GGTGGGGCTGCCGAGCTG....................................................................................................................182.000.00-------------------------------------------------------1.00-----------------------------------------------1.00-------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGTTA..................................................................................2412.0024.00--------2.00------------------------------------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGA....................................................................................2011.005.00-----------------------------------------1.00---------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGAA...................................................................................2211.0020.00--------1.00------------------------------------------------------------------------------------------------------
...............................ACCGCACAGGGGACAA................................................................................................................................................................1611.001.00-------------------------------------------------1.00-------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCTT.................................................................................231.000.001.00--------------------------------------------------------------------------------------------------------------
..............................................AATGGTGGGTGTAGAACTG..............................................................................................................................................191.000.00-------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGT....................................................................................2211.0024.00--------------------------------------1.00------------------------------------------------------------------------
............................ACCACCGCACAGGGGAC..................................................................................................................................................................1711.001.00---------------------------------------------------------------------------1.00-----------------------------------
.....CTATCGAGTCAAGTATACACCACACCA...............................................................................................................................................................................2711.001.00------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGC...................................................................................2111.001.001.00--------------------------------------------------------------------------------------------------------------
...................................................TGGGTGTAGAATGGGTG...........................................................................................................................................171.000.00---------------------------------------------------------------------------------------------1.00-----------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTCA................................................................................2511.008.00------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGT.....................................................................................2011.008.00--------------------------------------------1.00------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGA.....................................................................................2211.002.00-----1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGTAT...................................................................................2311.0025.00----------------------------------------------------------------------------------------------1.00----------------
......................CACCACACCACCGCACAGGGGA...................................................................................................................................................................2211.001.00---------------------------------------------------------------1.00-----------------------------------------------
......................................................................................................................................................................TCCCACCTACGACTACACATA....................211.000.00-----------------------------------------------------------------------------------------------------1.00---------
.................................................................................................................................................................................ACTACACACACTGCCTCTG...........1911.001.00------------------------------------------------------------------------------1.00--------------------------------
....................................ACAGGGGACAAATGGAC..........................................................................................................................................................171.000.00-----------------------------------------------------1.00---------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTT.................................................................................2411.008.00---------------------------------------------------------------------------------------------------1.00-----------
.................................................................................................................CAGAGTAGGGCTGGATGGTAG.........................................................................2111.001.00--------------------------------------------------------------------------------1.00------------------------------
........................................................................................................................................CCCACTGCCTATGCCCCCGTA..................................................211.000.00-----------------------------------------------------------------------1.00---------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGC...................................................................................2411.001.00---1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................GGGCTGGATGGTAGGGGGA....................................................................191.000.00---------------------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................................................CTACGACTACACACACTGC................1911.001.00------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAG..................................................2021.001.00------------------------------------------------------------------------------------------------1.00--------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTT.................................................................................2511.0013.00--------------------------------------------------------1.00------------------------------------------------------
.......ATCGAGTCAAGTATACACCACACCA...............................................................................................................................................................................2511.001.00--------------1.00------------------------------------------------------------------------------------------------
..................................................................................................GGCCATGGGGTAGGGCAGAGTAGGGC...................................................................................2611.001.00--------------------1.00------------------------------------------------------------------------------------------
...............................................................................................................GGCAGAGTAGGGCTGTTCT.............................................................................191.000.00--------------------------------------------1.00------------------------------------------------------------------
...................................................................................................................GAGTAGGGCTGGATGGTAGGG.......................................................................2111.001.00------------------------------1.00--------------------------------------------------------------------------------
.....................................CAGGGGACAAATGGTGCA........................................................................................................................................................181.000.00-----------------------------------------------------------1.00---------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGCAGA.....................................................................................201.000.00------------------------------1.00--------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTT..................................................................................2311.004.00-------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCATCG3011.001.00-------1.00-------------------------------------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAG......................................................................................1811.001.00----------------------1.00----------------------------------------------------------------------------------------
.................................................GGTGGGTGTAGAATGCTG............................................................................................................................................181.000.00----------------------------------------------------------------1.00----------------------------------------------
................AGTATACACCACACCACCGCA..........................................................................................................................................................................2111.001.00------------1.00--------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGC......................................................................3511.001.00----------------------1.00----------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGATTAG......................................................................................191.000.00--1.00------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CACTGCCTCTGTGACTCCATC.2111.001.00----------------------------------------------------------------------------------1.00----------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCTTT................................................................................2611.0013.001.00--------------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGT....................................................................................2111.0020.00----1.00----------------------------------------------------------------------------------------------------------
........................................................................................................GGGGTAGGGCAGAGTAGG.....................................................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------
...............AAGTATACACCACACCACCGCACAGGGGA...................................................................................................................................................................2911.001.00--------------1.00------------------------------------------------------------------------------------------------
.................................................................................................................CAGAGTAGGGCTGGATGGTAGG........................................................................2211.001.00-----------------------------1.00---------------------------------------------------------------------------------
.............TCAAGTATACACCACACCACC.............................................................................................................................................................................2111.001.00----------------------------------------------------------------------1.00----------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCAGA................................................................................2511.0011.00------------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................AGAGTAGGGCTGGATGGTAGGGC......................................................................2311.001.00-----------------------------------------------------------------------------------------1.00---------------------
.....................................................................................................CATGGGGTAGGGCAGAGAAG......................................................................................201.000.00-1.00-------------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGA.....................................................................................2011.008.00-----1.00---------------------------------------------------------------------------------------------------------
..........................................................................................................................................CACTGCCTATGCCCCACAGA.................................................201.000.00------------------------------------------------------------1.00--------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGAA..................................................................................2311.004.00------1.00--------------------------------------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTAT.................................................................................2411.004.00-----------------------------------------------------------------------------1.00---------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGACGG.....................................................................................211.000.00-----------------------------------1.00---------------------------------------------------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGCTG.................................................................................2411.001.00----------1.00----------------------------------------------------------------------------------------------------
....................................................................................................CCATGGGGTAGGGCAGAGTAGGGCA..................................................................................2511.001.00------------------------------------------------1.00--------------------------------------------------------------
.................................................................................................................................................................................ACTACACACACTGCCTCTGTGACTCCAT..2811.001.00-------1.00-------------------------------------------------------------------------------------------------------
.................GTATACACCACACCACCGCACAGGGGAC..................................................................................................................................................................2811.001.00---------------------------------------------------------------------------------1.00-----------------------------
.......ATCGAGTCAAGTATACACCACATA................................................................................................................................................................................241.000.00------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................CATGGGGTAGGGCAGAGTAGGGCATA................................................................................2611.0019.00---------------------------------1.00-----------------------------------------------------------------------------
...................................................TGGGTGTAGAATGGGGGGA.........................................................................................................................................191.000.00--------------------------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................CCCACCTACGACTACACAGCC...................211.000.00-------------------------------------------------------------------------------1.00-------------------------------
......................................................................................................ATGGGGTAGGGCAGAGTAGGGTA..................................................................................2311.004.00---1.00-----------------------------------------------------------------------------------------------------------
........TCGAGTCAAGTATACACCACACC................................................................................................................................................................................2311.001.00--------------1.00------------------------------------------------------------------------------------------------
.......................................................................................................TGGGGTAGGGCAGAGTAGGGCTGGATGGTAG.........................................................................3111.001.00------------------------1.00--------------------------------------------------------------------------------------
.........................................................................................................................................CCACTGCCTATGCCCCACAGTTA...............................................2320.501.00---------------------------------------------------------------------------------------------------------0.50-----
.........................................................................................................................................CCACTGCCTATGCCCCACAGTT................................................2220.501.00-------------------------------------------------------------------------------------0.50-------------------------
..............................CACCGCACAGGGGAC..................................................................................................................................................................1520.500.50----------------------------------------------------------------------------------------------------------0.50----
...........................................................................................................GTAGGGCAGAGTAGGGC...................................................................................1720.500.50--------------------------------------------------------------------------------------------------------0.50------
..........................................................................................................................GCTGGATGGTAGGGCC.....................................................................1630.330.33----------------------------------------------0.33----------------------------------------------------------------
..................................GCACAGGGGACAAATG.............................................................................................................................................................1630.330.33--------------------------------------------------------------------------------------------------------0.33------
...........................................................................................................GTAGGGCAGAGTAGGG....................................................................................1640.250.25-------------------------------------------------------------------------------------------------------------0.25-
.........................................................................................................................................................................CACCTACGACTAC.........................1370.140.14-----------------------------------------------0.14---------------------------------------------------------------
.............................................................................................................AGGGCAGAGTAGGGC...................................................................................1580.120.12--------------------------------------------------------------------------------------------------------------0.12

Antisense strand
GTAGCCTATCGAGTCAAGTATACACCACACCACCGCACAGGGGACAAATGGTGGGTGTAGAATGGGGTGGGGTGGTGGGGCTGCCGAGCAGGGCGATGGGCCATGGGGTAGGGCAGAGTAGGGCTGGATGGTAGGGCCCACTGCCTATGCCCCACAGGTGCATCTATCCCACCTACGACTACACACACTGCCTCTGTGACTCCATCG
.......................................................................................................(((((((((((((....(((((.........))))).)))))).))))))).....................................................
................................................................................................97..........................................................157................................................
SizePerfect hitTotal NormPerfect NormSRR387910(GSM843862)
antibody for ip: Ago2. (ago2 cell line)
SRR207113(GSM721075)
IP against AGO 1 & 2. (ago1/2 cell line)
SRR207114(GSM721076)
IP against AGO 1 & 2, RRP40 knockdown. (ago1/2 RRP40 cell line)
GSM1105750AGO3(GSM1105750)
small RNA sequencing data. (ago3 hela)
SRR039193(GSM494812)
HL60 cell line is derived from acute promyelo. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)
SRR189782GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR189784SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)
SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)
SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)
SRR207116(GSM721078)
Nuclear RNA. (cell line)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
DRR001485(DRX001039)
Hela long total cell fraction, LNA(+). (hela)
RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330870(SRX091708)
tissue: skin psoriatic involveddisease state:. (skin)
SRR189787SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR033714(GSM497059)
Burkitt Lymphoma (BL134). (B cell)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000557(DRX000315)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR038858(GSM458541)
MEL202. (cell line)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR207111(GSM721073)
Whole cell RNA. (cell line)
SRR038855(GSM458538)
D10. (cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR038863(GSM458546)
MM603. (cell line)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
GSM1105749AGO2(GSM1105749)
small RNA sequencing data. (ago2 hela)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR039191(GSM494810)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR343334SRR038859(GSM458542)
MM386. (cell line)
SRR553575(SRX182781)
source: Kidney. (Kidney)
GSM450598(GSM450598)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR033723(GSM497068)
L1236 cell line (L1236). (B cell)
TAX577580(Rovira)
total RNA. (breast)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR033719(GSM497064)
6hr Activated B cell line (ABC158). (B cell)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR191562(GSM715672)
82genomic small RNA (size selected RNA from t. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR191553(GSM715663)
96genomic small RNA (size selected RNA from t. (breast)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR029125(GSM416754)
U2OS. (cell line)
TAX577740(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR000555(DRX000313)
THP-1 whole cell RNA, no treatment. (cell line)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR033713(GSM497058)
Burkitt Lymphoma (BL115). (B cell)
SRR038856(GSM458539)
D11. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191628(GSM715738)
52genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR094130(GSM651906)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR191600(GSM715710)
90genomic small RNA (size selected RNA from t. (breast)
SRR037934(GSM510472)
293cand4_rep3. (cell line)
GSM450597(GSM450597)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR038852(GSM458535)
QF1160MB. (cell line)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
TAX577743(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR191397(GSM715507)
30genomic small RNA (size selected RNA from t. (breast)
SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)
SRR060168(GSM565978)
5-8F_nucleus. (cell line)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
DRR000556(DRX000314)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR038862(GSM458545)
MM472. (cell line)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR326282(GSM769512)
Dicer mRNA was knocked down using siDicer, to. (cell line)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
TAX577588(Rovira)
total RNA. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039625(GSM531988)
HBV(-) HCV(-) HCC Tissue Sample. (liver)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450600(GSM450600)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR029131(GSM416760)
MCF7. (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR191587(GSM715697)
50genomic small RNA (size selected RNA from t. (breast)
SRR033720(GSM497065)
EBV activated B cell line (EBV159). (B cell)
DRR000558(DRX000316)
THP-1 whole cell RNA, after 3 day treatment w. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR037935(GSM510473)
293cand3. (cell line)
SRR444057(SRX128905)
Sample 15cDNABarcode: AF-PP-334: ACG CTC TTC . (skin)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
..................................GCACAGGGGACAAATGGACCA........................................................................................................................................................ 211.000.00----------1.00----------------------------------------------------------------------------------------------------
..................................................................................GCCGAGCAGGGCGATGGG........................................................................................................... 1811.001.00-----------------------------------------------1.00---------------------------------------------------------------