ID: rheMac3_genscan_chr7.945_18.5p
GENE: RPL4(19)
chr7:44712023-44712372-


Display Libraries
(1)
HEART
(2)
KIDNEY
(3)
OTHER
(2)
TESTES

Sense strand
CACCCTGCGCAAAAACAACAGACAGCCCTACGCTGTCAGTGAATTAGCAGGTATGGATTTATACCTTCTGCAGATATTTTAGGGATTGCTTTACAGTAGTGATGAAATTCCACTTCATTGGTCCGTGTTTCTGAACCACATGATTTTCTCGGATGTTCTGATGCTGTTTGCTACCATGCGTAATAATCATAGGTTGGTATTTATGATGAAGCAGCTAAAGTTTTTCTCTCTCAATTTTAGGTCATCAGACCAGTGCTGAGTCTTGGGGTACTGGCAGAGCTGTGGCTCAAATTCCCAGAGTTCGAGGTGGTGGGACTCACCGCTCTGGCCAGGGTGCTTTTGGAAACGTA
............................................................................................((((((.....(((..(((...((((((((.((......)).)))).)))).......)))..)))...)))))).......................................................................................................................................................................................
.........................................................................................90...........................................................................167.....................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553579(SRX182785)
source: Heart. (Heart)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................291464.00464.0097.0063.0073.0055.0085.0055.0030.006.00
.......................................................................................................................................CCACATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................281125.00125.0029.0035.0011.0021.0012.008.006.003.00
...........................................................................................................................................ATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................24196.0096.0047.0013.0012.0013.003.004.001.003.00
.........................................................................................................................................ACATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................26194.0094.0043.0015.008.007.009.008.002.002.00
.............................................................................................................................................GATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................22190.0090.0037.0013.0010.0011.007.006.003.003.00
........................................................................................................................................CACATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................27177.0077.0040.006.005.0010.007.007.001.001.00
..........................................................................................................................................CATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................25159.0059.0032.004.007.006.003.006.00-1.00
.....................................................................................................................................AACCACATGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................30155.0055.0013.009.006.004.008.006.007.002.00
............................................................................................................................................TGATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................23141.0041.0010.005.006.006.002.009.00-3.00
..............................................................................................................................................ATTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................21137.0037.0016.006.008.003.001.001.001.001.00
..............................................................................................................................GTTTCTGAACCACATGATT.............................................................................................................................................................................................................19129.0029.00-1.0011.0015.00--2.00-
...............................................................................................................................TTTCTGAACCACATGATT.............................................................................................................................................................................................................18124.0024.004.00-9.009.00--2.00-
....................................................................................................................................................TCGGATGTTCTGATG...........................................................................................................................................................................................15119.0019.008.006.00-2.00-2.00-1.00
...............................................................................................................................................TTTTCTCGGATGTTCTGATG...........................................................................................................................................................................................20117.0017.00-6.008.00-2.001.00--
................................................................................................................................................TTTCTCGGATGTTCTGATG...........................................................................................................................................................................................19110.0010.003.002.002.003.00----
...................................................................................................................................................CTCGGATGTTCTGATG...........................................................................................................................................................................................1617.007.001.002.00--1.003.00--
..............................................................................................AGTAGTGATGAAATTC................................................................................................................................................................................................................................................1626.006.000.501.501.501.001.50---
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGAT............................................................................................................................................................................................2816.006.004.00--1.00-1.00--
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGATT...........................................................................................................................................................................................295.006.00--2.002.00-1.00--
................................................................................................................................TTCTGAACCACATGATT.............................................................................................................................................................................................................1724.504.501.000.501.001.00--1.00-
..................................................................................................................................................TCTCGGATGTTCTGATG...........................................................................................................................................................................................1714.004.00-1.001.001.00---1.00
..............................................................................................AGTAGTGATGAAATTCC...............................................................................................................................................................................................................................................1714.004.001.00-1.001.00--1.00-
.................................................................................................................................................TTCTCGGATGTTCTGATG...........................................................................................................................................................................................1813.003.001.001.00----1.00-
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTTATG...........................................................................................................................................................................................293.000.00--1.002.00----
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTCATG...........................................................................................................................................................................................292.000.00-----2.00--
..............................................................................................................................GTTTCTGAACCACATGATTTTCTCGGA.....................................................................................................................................................................................................2712.002.00--1.001.00----
..............................................................................................AGTAGTGATGAAATTCCACTTCATTGG.....................................................................................................................................................................................................................................2712.002.00-----2.00--
.......................................................................................................................................CCACATGATTTTCTCGGATGTTCTGA.............................................................................................................................................................................................2612.002.00-----2.00--
.........................................................................................................................................ACATGATTTTCTCGGATGTTCTGATT...........................................................................................................................................................................................262.000.002.00-------
..........................................................................................................................................CATGATTTTCTCGGATGTTCTTATG...........................................................................................................................................................................................252.000.001.00-1.00-----
.............................................................................................................................TGTTTCTGAACCACATGATT.............................................................................................................................................................................................................2012.002.00---1.00--1.00-
...........................................................................................................................................ATGATTTTCTCGGATGTTCTGA.............................................................................................................................................................................................2212.002.001.00---1.00---
..............................................................................................AGTAGTGATGAAATTCCACTTCATTGGTCCG.................................................................................................................................................................................................................................3112.002.00-2.00------
.......................................................................................................................................CCACATGATTTTCTCGGATGTTCTGATT...........................................................................................................................................................................................282.001.00---2.00----
..............................................................................................AGTAGTGATGAAATTCCACTTCATTGGTCCGTG...............................................................................................................................................................................................................................3312.002.00------2.00-
............................................................................................................................GTGTTTCTGAACCACATGATT.............................................................................................................................................................................................................2112.002.00---1.00--1.00-
..............................................................................................AGTAGTGATGAAATTCCACTTCA.........................................................................................................................................................................................................................................2311.001.00------1.00-
..............................................................................................................................................ATTTTCTCGGATGTTCTTATG...........................................................................................................................................................................................211.000.001.00-------
.......................................................................................................................................CCACATGATTTTCTCGGATGTTCTGAT............................................................................................................................................................................................2711.001.00--1.00-----
.................................................................................................AGTGATGAAATTCCACTTCATTGGTC...................................................................................................................................................................................................................................2611.001.001.00-------
........................................................................................................................................CACATGATTTTCTCGGATGTTGATG.............................................................................................................................................................................................251.000.00-----1.00--
...........................................................................................................................................ATGATTTTCTCGGATGTTCTGAT............................................................................................................................................................................................2311.001.001.00-------
.............................................................................................CAGTAGTGATGAAATTCC...............................................................................................................................................................................................................................................1811.001.00---1.00----
...........................................................................................................................................................................................................................................................................................................GTTCGAGGTGGTGGGACTCACCGCTCTGGC.....................3011.001.001.00-------
..............................................................................................AGTAGTGATGAAATTCCACTTCATTGGAA...................................................................................................................................................................................................................................291.002.00---1.00----
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGAAA...........................................................................................................................................................................................291.000.00-1.00------
............................TACGCTGTCAGTGAATTAGCAG............................................................................................................................................................................................................................................................................................................2211.001.00-1.00------
..........................................................................................................................................................................................................................................................................................................AGTTCGAGGTGGTGGGACTCACCGCTCTGGC.....................3111.001.001.00-------
................................................................................................................................TTCTGAACCACATGATTTTCTGATG.....................................................................................................................................................................................................251.000.00-------1.00
...................................................................................................................................TGAACCACATGATTTTCTCGGAT....................................................................................................................................................................................................2311.001.00-1.00------
.......................................................................................................................................CCACATGATTTTCTCGGATGTTCTGCTG...........................................................................................................................................................................................281.000.00--1.00-----
.....................................................................................................................................AACCACATGATTTTCTCGGATGTTCTGATT...........................................................................................................................................................................................301.000.00--1.00-----
................................................................................................................................TTCTGAACCACATGATTTTCTCGGATG...................................................................................................................................................................................................2711.001.00-----1.00--
.......................................................................................................................................................GATGTTCTGATGCTGTT......................................................................................................................................................................................1711.001.00-----1.00--
.........................................................................................................................................ACATGATTTTCTCGGATGTTCTCATG...........................................................................................................................................................................................261.000.00--1.00-----
.....................................................................................................................................AACCACATGATTTTCTCGGATGTTCTTATG...........................................................................................................................................................................................301.000.00---1.00----
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGAAG...........................................................................................................................................................................................291.000.00----1.00---
..................................................................................................................TCATTGGTCCGTGTTTCTGAACCA....................................................................................................................................................................................................................2411.001.001.00-------
.............................................................................................................CCACTTCATTGGTCCGTGTTTCTGAACC.....................................................................................................................................................................................................................2811.001.001.00-------
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTTATT...........................................................................................................................................................................................291.000.00---1.00----
...........................................................................................................................................ATGATTTTCTCGGATGTTCTTATG...........................................................................................................................................................................................241.000.00---1.00----
...........................CTACGCTGTCAGTGAATTAGC..............................................................................................................................................................................................................................................................................................................2111.001.001.00-------
................................................................................................................CTTCATTGGTCCGTGTTTCTGAACCATATG................................................................................................................................................................................................................301.000.00----1.00---
.................................................................................................AGTGATGAAATTCCACTTCATTGGTCCGTG...............................................................................................................................................................................................................................3011.001.00--1.00-----
..............................................................................................AGTAGTGATGAAATTCCACTTCATTGGTCCGT................................................................................................................................................................................................................................3211.001.00--1.00-----
............................TACGCTGTCAGTGAATTAGCAGGTCATC......................................................................................................................................................................................................................................................................................................281.000.00--1.00-----
.....................................................................................................................................AACCACATGATTTTCTCGGATGTTCTGA.............................................................................................................................................................................................2811.001.00---1.00----
...............................................................................................................................TTTCTGAACCACATGATTTTCTCGGATG...................................................................................................................................................................................................2811.001.00--1.00-----
.......................................................................................................................GGTCCGTGTTTCTGAACCACATGATT.............................................................................................................................................................................................................2611.001.00----1.00---
..........................................................................................................................................CATGATTTTCTCGGATGTTCTGA.............................................................................................................................................................................................2311.001.00----1.00---
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGGTG...........................................................................................................................................................................................291.000.00-1.00------
.....................................................................................................................TTGGTCCGTGTTTCTGAACC.....................................................................................................................................................................................................................2011.001.00-1.00------
..............................................................................................................................GTTTCTGAACCACATGACT.............................................................................................................................................................................................................191.000.00--1.00-----
......................................................................................................................................ACCACATGATTTTCTCGGATGTTCTGATA...........................................................................................................................................................................................291.006.00---1.00----
..........................................................................................................................................CATGATTTTCTCGGATGTTCTGCTG...........................................................................................................................................................................................251.000.001.00-------
...................................................................................................................CATTGGTCCGTGTTTCTGAACCACATGATT.............................................................................................................................................................................................................3011.001.00------1.00-
..............................................................................................AGTAGTGATGAAATTCCACTTCATTG......................................................................................................................................................................................................................................2611.001.00------1.00-
.....................................................................................................................TTGGTCCGTGTTTCTGAACCACATGATT.............................................................................................................................................................................................................2811.001.00---1.00----
..............................................................................................AGTAGTGATGAAATT.................................................................................................................................................................................................................................................15140.790.790.070.070.290.070.14--0.14
...........................................................................................................................................ATGATTTTCTCGGATGTTTTGA.............................................................................................................................................................................................220.500.50----0.50---
...........................................................................................................................................ATGATTTTCTCGGATGTT.................................................................................................................................................................................................1820.500.500.50-------
...............................................................................................GTAGTGATGAAATTCC...............................................................................................................................................................................................................................................1620.500.50-0.50------
....CTGCGCAAAAACAAC...........................................................................................................................................................................................................................................................................................................................................1520.500.50-----0.50--
...........................................................................................................................................ATGATTTTCTCGGATG...................................................................................................................................................................................................1620.500.500.50-------
............................................................................................................................................TGATTTTCTCGGATG...................................................................................................................................................................................................1540.250.250.25-------
..................................................................................................................................CTGAACCACATGATT.............................................................................................................................................................................................................15120.250.250.17-0.08-----
................................................................................................................................................................................................................................................................TGAGTCTTGGGGTACTGGCAGAGCT.....................................................................2550.200.20------0.20-
...............................................................................................GTAGTGATGAAATTC................................................................................................................................................................................................................................................1560.170.170.17-------
.................................................................................................................................................................................................................................................................GAGTCTTGGGGTACTGG............................................................................1760.170.17-------0.17

Antisense strand
CACCCTGCGCAAAAACAACAGACAGCCCTACGCTGTCAGTGAATTAGCAGGTATGGATTTATACCTTCTGCAGATATTTTAGGGATTGCTTTACAGTAGTGATGAAATTCCACTTCATTGGTCCGTGTTTCTGAACCACATGATTTTCTCGGATGTTCTGATGCTGTTTGCTACCATGCGTAATAATCATAGGTTGGTATTTATGATGAAGCAGCTAAAGTTTTTCTCTCTCAATTTTAGGTCATCAGACCAGTGCTGAGTCTTGGGGTACTGGCAGAGCTGTGGCTCAAATTCCCAGAGTTCGAGGTGGTGGGACTCACCGCTCTGGCCAGGGTGCTTTTGGAAACGTA
............................................................................................((((((.....(((..(((...((((((((.((......)).)))).)))).......)))..)))...)))))).......................................................................................................................................................................................
.........................................................................................90...........................................................................167.....................................................................................................................................................................................
SizePerfect hitTotal NormPerfect NormSRR553579(SRX182785)
source: Heart. (Heart)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
..................................................................................................................gAACACGGACCAATGG............................................................................................................................................................................................................................ 161.000.00---1.00----
..................................................................................................................gAAACACGGACCAATGG........................................................................................................................................................................................................................... 171.000.00-----1.00--
..................................................................................................................AACACGGACCAATGA............................................................................................................................................................................................................................. 1511.001.00----1.00---