ID: rheMac3_genscan_chr6.2787_1
GENE: Other-tpm1(2)
chr6:161708912-161709114-


Display Libraries
(2)
KIDNEY
(1)
OTHER
(2)
TESTES

Sense strand
CAAGCAGCTGGAGGGGCAGCGGAAAAAGCTGAAGAGGACAGAGGCGAAAAGTATTCTCAATCCGTGAAGTAGGCCCAGGAGAAACTGGAGCGGGCTGAGAAGGCCACCGACGCTGAGGCGGATATGGCCTCCCTTAACCGCCACATTCAACAGGAAGAGGAGGAGCCGGACCGGGCCCAGGAGCGCTGTCTACAGCCCTGCAA
..................................................((.((((((..((((.........((((......)))).))))..)))))).))...................................................................................................
..................................................51......................................................107..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR553581(SRX182787)
source: Testis. (testes)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553606(SRX182812)
source: Kidney. (Kidney)
.....................................................TTCTCAATCCGTGAAGTAG...................................................................................................................................1914.004.003.001.00---
.......................................................................................GAGCGGGCTGAGAAGGCCA.................................................................................................1914.004.001.003.00---
......................................................TCTCAATCCGTGAAGTAGG..................................................................................................................................1913.003.003.00----
...............................AAGAGGACAGAGGCGAAAA.........................................................................................................................................................1913.003.003.00----
.......................................................CTCAATCCGTGAAGTAGGC.................................................................................................................................1913.003.002.001.00---
...................................................................................................................................................................AGCCGGACCGGGCCCAGGA.....................1912.002.001.001.00---
.....................................................TTCTCAATCCGTGAAGTAGG..................................................................................................................................2012.002.00-2.00---
............................................................TCCGTGAAGTAGGCCCAGG............................................................................................................................1912.002.002.00----
............................................................TCCGTGAAGTAGGCCCAGGAGAAAC......................................................................................................................2511.001.001.00----
.....................................................TTCTCAATCCGTGAAGGAG...................................................................................................................................191.000.001.00----
...............................................................................................TGAGAAGGCCACCGACGCTGAGGCGGA.................................................................................2711.001.001.00----
.............................................................CCGTGAAGTAGGCCCAGGAGAAACTGG...................................................................................................................2711.001.001.00----
.............................................................CCGTGAAGTAGGCCCAGGAGAAACTGT...................................................................................................................271.000.001.00----
..................GCGGAAAAAGCTGAAGAGG......................................................................................................................................................................1911.001.00-1.00---
.......................................................................................................................................AACCGCCACATTCAACAGG.................................................1911.001.001.00----
......................................................TCTCAATCCGTGAAGTAGGC.................................................................................................................................2011.001.001.00----
.....................................................................TAGGCCCAGGAGAAACTGGAGCGGGC............................................................................................................2611.001.001.00----
..............................................................................GAGAAACTGGAGCGGGCTGAGAAGGC...................................................................................................2611.001.001.00----
.........................................................................CCCAGGAGAAACTGGAGCGGGCTGA.........................................................................................................2511.001.001.00----
...........................................GCGAAAAGTATTCTCAATCCGTGAAGTAG...................................................................................................................................2911.001.00-1.00---
....................................................................................................................................................AACAGGAAGAGGAGGAGCCGG..................................2111.001.00-1.00---
................................AGAGGACAGAGGCGAAAAG........................................................................................................................................................1911.001.001.00----
........................................................TCAATCCGTGAAGTAGGCCCAGGAGA.........................................................................................................................2611.001.001.00----
.....................................................................................TGGAGCGGGCTGAGAAGGCCACCGACGC..........................................................................................2811.001.001.00----
......................................................TCTCAATCCGTGAAGTAGGCCCAGGAG..........................................................................................................................2711.001.001.00----
..........................................................................................CGGGCTGAGAAGGCCACCGACGCTGAGGC....................................................................................2911.001.00-1.00---
................................................................................GAAACTGGAGCGGGCTGAGAAGGCCACC...............................................................................................2811.001.001.00----
........................AAAGCTGAAGAGGACAGAG................................................................................................................................................................1911.001.001.00----
.......................................................................................GAGCGGGCTGAGAAGGCCATA...............................................................................................211.004.001.00----
...................................................TATTCTCAATCCGTGAAGTAGGCCCAGGA...........................................................................................................................2911.001.001.00----
....................................................................................................................................................AACAGGAAGAGGAGGAGCCGGACCGGT............................271.000.001.00----
........................................................TCAATCCGTGAAGTAG...................................................................................................................................1621.001.001.00----
..........................................................AATCCGTGAAGTAGGCCCAGGAGAAACTGGAGC................................................................................................................3311.001.00-1.00---
......................................................TCTCAATCCGTGAAGTAG...................................................................................................................................1811.001.00-1.00---
...................CGGAAAAAGCTGAAGAGGA.....................................................................................................................................................................1920.500.500.50----
..................................................................................AACTGGAGCGGGCTGAGA.......................................................................................................1820.500.500.50----
...................................................................................ACTGGAGCGGGCTGAG........................................................................................................1620.500.50--0.50--
..........................AGCTGAAGAGGACAGAG................................................................................................................................................................1730.330.330.33----
...........................................................................................................................................GCCACATTCAACAGG.................................................1570.140.14---0.14-

Antisense strand
CAAGCAGCTGGAGGGGCAGCGGAAAAAGCTGAAGAGGACAGAGGCGAAAAGTATTCTCAATCCGTGAAGTAGGCCCAGGAGAAACTGGAGCGGGCTGAGAAGGCCACCGACGCTGAGGCGGATATGGCCTCCCTTAACCGCCACATTCAACAGGAAGAGGAGGAGCCGGACCGGGCCCAGGAGCGCTGTCTACAGCCCTGCAA
..................................................((.((((((..((((.........((((......)))).))))..)))))).))...................................................................................................
..................................................51......................................................107..............................................................................................
SizePerfect hitTotal NormPerfect NormSRR553581(SRX182787)
source: Testis. (testes)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553606(SRX182812)
source: Kidney. (Kidney)
.................................................................................................................................TCTTCCTGTTGAATGTGGCGGTTAAGGGA............................................. 291132.00132.00111.0021.00---
........................................TACTTCACGGATTGAGAATACTTTTCGCCTC.................................................................................................................................... 31124.0024.0017.007.00---
..................................................................................................................................gTCTTCCTGTTGAATGTGGCGGTTAAGGG............................................ 2922.000.0021.001.00---
.....................................................................................................................................aggaTCTTCCTGTTGAATGTGGCGGAGGA......................................... 2919.000.0019.00----
..............................................................................................................................TCCTGTTGAATGTGGCGGTTAAGGGAGGC................................................ 29111.0011.009.002.00---
................................................TGGGCCTACTTCACGGATTGAGAATACTT.............................................................................................................................. 29111.0011.0010.001.00---
...........................................................................................................................................TCTTCCTGTTGAATGTGGC............................................. 1918.008.006.002.00---
..............................................................................................................................................................................TTGCAGGGCTGTAGACAGCGCTCCTGGGC 2917.007.005.002.00---
.......................................TTCACGGATTGAGAATACTTTTCGCCTCT....................................................................................................................................... 2917.007.004.003.00---
...............................................TGGGCCTACTTCACGGATTGAGAATACTTT.............................................................................................................................. 3015.005.003.002.00---
.........................................TACTTCACGGATTGAGAATACTTTTCGCCT.................................................................................................................................... 3014.004.003.001.00---
....................................................................................................................................................................TAGACAGCGCTCCTGGGCCCGGTCCGGC........... 2814.004.003.001.00---
..................................................................................................................................TCTTCCTGTTGAATGTGGCGGTTAAGGG............................................. 2814.004.003.001.00---
.................................................TGGGCCTACTTCACGGATTGAGAATACT.............................................................................................................................. 2814.004.004.00----
..................................................................................................................................................................TAGACAGCGCTCCTGGGCCCGGTCCGGCTC........... 3013.003.001.002.00---
....................................................................................................................................................................TGTAGACAGCGCTCCTGGGCCCGGTCCGGC......... 3013.003.001.002.00---
..............................................................................................................................TTCCTGTTGAATGTGGCGGTTAAGGGAGGC............................................... 3013.003.00-3.00---
..........................................TACTTCACGGATTGAGAATACTTTTCGCC.................................................................................................................................... 2913.003.00-3.00---
..............................................................................................................................................................................TGCAGGGCTGTAGACAGCGCTCCTGGGC. 2812.002.001.001.00---
.....................................TTCACGGATTGAGAATACTTTTCGCCTCTGT....................................................................................................................................... 3112.002.002.00----
.....................................................................................................................................gggaTCTTCCTGTTGAATGTGGCGGAGGG......................................... 292.000.002.00----
......................................TTCACGGATTGAGAATACTTTTCGCCTCTG....................................................................................................................................... 3012.002.002.00----
........................................ACTTCACGGATTGAGAATACTTTTCGCCTC..................................................................................................................................... 3012.002.002.00----
.............................................ctccTACTTCACGGATTGAGAATACTCCTC................................................................................................................................ 302.000.002.00----
.........................................................................................................................................TCTTCCTGTTGAATGTGGCGG............................................. 2112.002.002.00----
......................................................TCTCCTGGGCCTACTTCACGGATTGAGA......................................................................................................................... 2812.002.002.00----
...................................................................................................................................TCCTCTTCCTGTTGAATGTGGCGGTTAAGG.......................................... 3012.002.001.001.00---
.............................................................................................TCAGCGTCGGTGGCCTTCTCAGC....................................................................................... 2312.002.00-2.00---
.......................................................................................................................................TCTTCCTGTTGAATGTGGCGGTT............................................. 2312.002.002.00----
...........................................GCCTACTTCACGGATTGAGAATACTTTTCGC................................................................................................................................. 3112.002.002.00----
..............................................................................................................................................................................CAGGGCTGTAGACAGCGCTCCTGGGC... 2612.002.001.001.00---
.....................................................................................................................................ggaTCTTCCTGTTGAATGTGGCGGTAGG.......................................... 282.000.001.001.00---
.......................................................................................................................................TCCTCCTCTTCCTGTTGAATGTGGCGGTT....................................... 2912.002.001.001.00---
.................................................CCTGGGCCTACTTCACGGATTGAGAATACT............................................................................................................................ 3011.001.001.00----
.............................TTCGCCTCTGTCCTCTTCA........................................................................................................................................................... 1911.001.001.00----
.....................................................................................................................................agaaTCTTCCTGTTGAATGTGGCGGAAGA......................................... 291.000.001.00----
.............................................................................................................................CTGTTGAATGTGGCGGTTAAGGGAGGCC.................................................. 2811.001.00-1.00---
..........................................ccTACTTCACGGATTGAGAATACTTTTCGCC.................................................................................................................................. 311.000.001.00----
...............................................................................................................................TTCCTGTTGAATGTGGCGGTTAAGGGAGG............................................... 2911.001.001.00----
....................................................................................................................................TCTTCCTGTTGAATGTGGCGGTTAAG............................................. 2611.001.001.00----
.........................................................................................................................................cggaTTCCTGTTGAATGTGAGGC........................................... 231.000.001.00----
........................................................................................................................................TCCTCTTCCTGTTGAATGTGGCGGT.......................................... 2511.001.001.00----
...................................................................................................................................CCTCTTCCTGTTGAATGTGGCGGTTAAGG........................................... 2911.001.001.00----
......................................................................................................................................................................................GCAGGGCTGTAGACAGCGC.. 1911.001.00-1.00---
...................................CACGGATTGAGAATACTTTTCGCCTCTGTCC......................................................................................................................................... 3111.001.001.00----
.........................................................................................................................................tgTCCTCCTCTTCCTGTTGAATGTGGCGT..................................... 291.000.001.00----
..................................................................................................................................ggTCTTCCTGTTGAATGTGGCGGTTAAGGG........................................... 301.000.001.00----
.........................................................................................................................................taTCCTCTTCCTGTTGAATGTGGCAT........................................ 261.000.001.00----
.............................................................................................................................................tggcTCCTCCTCTTCCTGTTGAACGGT................................... 271.000.001.00----
...........................................TACTTCACGGATTGAGAATACTTTTCGC.................................................................................................................................... 2811.001.001.00----
...............................................................................................................................TCTTCCTGTTGAATGTGGCGGTTAAGGGAGG............................................. 3111.001.001.00----
........................................................................................................................................................................................TTGCAGGGCTGTAGACAGC 1911.001.001.00----
..................................................................................................................................tTCTTCCTGTTGAATGTGGCGGTTAAGGT............................................ 291.000.001.00----
................................................................................................................................................CCTCCTCTTCCTGTTGAAT........................................ 1911.001.00-1.00---
......................................................................................TCAGCGTCGGTGGCCTTCTCAGCCCGCTCC....................................................................................... 3011.001.001.00----
....................................................................................................................................agtTCTTCCTGTTGAATGTGGCGGTTTGA.......................................... 291.000.001.00----
..............................................................................................................................TGTTGAATGTGGCGGTTAAGGGAGGC................................................... 2611.001.00-1.00---
.....................................................................................................................................cggaTCTTCCTGTTGAATGTGGCGGAGGC......................................... 291.000.001.00----
........................................................................................................................................................................TAGACAGCGCTCCTGGGCCCGGTC........... 2411.001.001.00----
....................................CACGGATTGAGAATACTTTTCGCCTCTGTC......................................................................................................................................... 3011.001.00-1.00---
..................................................................................................................................................................................cggcCAGGGCTGTAGACAGCGCCGGC 261.000.00-1.00---
...........................................................................................................................................TCCTCCTCTTCCTGTTGAATGTGGC....................................... 2511.001.00-1.00---
....................................................................................................................AAGGGAGGCCATATCCGCC.................................................................... 1911.001.001.00----
..................................................................................................................................ggggTCCTGTTGAATGTGGCGGTTAGGGG............................................ 291.000.001.00----
...................................................................................................................................ggatTTCCTGTTGAATGTGGCGGTTTAGG........................................... 291.000.00-1.00---
...................................................................................................................................aTCTTCCTGTTGAATGTGGCGGTTAAGA............................................ 281.000.00-1.00---
.............................................TACTTCACGGATTGAGAATACTTTTC.................................................................................................................................... 2611.001.001.00----
...............................................GGGCCTACTTCACGGATTGAGAATACTTT............................................................................................................................... 2911.001.001.00----
....................................................................................................................................aTCCTCTTCCTGTTGAATGTGGCGGTTAAA......................................... 301.000.001.00----
.........................................ACTTCACGGATTGAGAATACTTTTCGCCT..................................................................................................................................... 2911.001.00-1.00---
...........................................TCACGGATTGAGAATACTTTTCGC........................................................................................................................................ 2411.001.001.00----
.................................................................................................................................aTCTTCCTGTTGAATGTGGCGGTTAAGGGA............................................ 301.000.001.00----
................................................................................................................................................................TAGACAGCGCTCCTGGGCCCGGTCCGGCTCCT........... 3211.001.001.00----
..................................................................................................................................cgggTCCTGTTGAATGTGGCGGTTAGGGC............................................ 291.000.001.00----
...............................................................................................................................TCCTGTTGAATGTGGCGGTTAAGGGAGG................................................ 2811.001.001.00----
...........................................................................................................................................CTCTTCCTGTTGAATGTGGC............................................ 2011.001.001.00----
............................................................................................aTCAGCGTCGGTGGCCTTCTCAGCA...................................................................................... 251.000.001.00----
.....................................................................................................................................................................TAGACAGCGCTCCTGGGCCCGGTCCGG........... 2711.001.001.00----
................................................TCACGGATTGAGAATACTT........................................................................................................................................ 1911.001.00-1.00---
.......................................................................................................................................gatTCCTCTTCCTGTTGAATGTGGCGTAG....................................... 291.000.001.00----
.............................................................................................................................................ctTCTTCCTGTTGAATGTC........................................... 191.000.001.00----
.....................................................................................................................................aTCTTCCTGTTGAATGTGGCGGTTAA............................................ 261.000.00-1.00---
...........................................................................................................................................TCCTGTTGAATGTGGC................................................ 1620.500.500.50----
..........................................................................................................................................................................................TGCAGGGCTGTAGACA. 1620.500.500.50----
............................................................................................................................................................GTCCGGCTCCTCCTC................................ 1580.120.12----0.12