ID: rheMac3_genscan_chr4.855_5
GENE: MDC1(6)
chr4:30980212-30980394-


Display Libraries
(1)
HEART
(2)
KIDNEY
(3)
OTHER
(2)
TESTES

Sense strand
TTATCAAGGAAGAGGAAGAAGATACTGCAGAGAAGCCAGGGAAGGAAGAGGTGAGGAGAGGGCTAGGACCACAAAGCTGGGAAAAATGGCTTTGGGGCTCTGAAACTCCCACCAAGATTTTTCTCAATCTCAGGATGTCATGACTCCAAAACCAGGCAAGAGAAAGAGAGACCAGGCAGAGGA
..................................................(((.(((((((((.....((.((((((((.......)))))))))))))))....))))))).......................................................................
..................................................51................................................................117................................................................
SizePerfect hitTotal NormPerfect NormSRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553579(SRX182785)
source: Heart. (Heart)
..........................................................................................TTTGGGGCTCTGAAACTCCCACA......................................................................239.001.002.00-2.003.001.00--1.00
..........................................................................................TTTGGGGCTCTGAAACTCCCA........................................................................2119.009.002.001.004.001.00--1.00-
..........................................................................................TTTGGGGCTCTGAAACTCCC.........................................................................2018.008.004.002.001.001.00----
......................................................................................................................................ATGTCATGACTCCAAAACCAGT...........................227.001.003.001.001.00---1.001.00
..........................................................................................TTTGGGGCTCTGAAACTCC..........................................................................1916.006.003.001.002.00-----
...................................................................................AAATGGCTTTGGGGCTCTGAAAC.............................................................................2313.003.002.00----1.00--
..........................................................................................TTTGGGGCTCTGAAACTCCCACT......................................................................233.001.00---2.00---1.00
.....................................................................................ATGGCTTTGGGGCTCTGAAACTCC..........................................................................2412.002.001.001.00------
.............................................................................TGGGAAAAATGGCTTTGG........................................................................................1812.002.00--1.00---1.00-
............................................................................................................................................TGACTCCAAAACCAGGCAAGAGAAAGAGAGT............312.000.00----2.00---
...................................................................................AAATGGCTTTGGGGCTCTGAAA..............................................................................2212.002.001.001.00------
...........................................................................................TTGGGGCTCTGAAACTCC..........................................................................1812.002.001.001.00------
...........................................................................................TTGGGGCTCTGAAACTCCCACA......................................................................222.000.002.00-------
...........................................................................................TTGGGGCTCTGAAACTCCGTGT......................................................................222.002.001.00--1.00----
...........................................................................................TTGGGGCTCTGAAACTCCCACC......................................................................2212.002.002.00-------
..........................................................................................TTTGGGGCTCTGAAACTC...........................................................................1812.002.001.001.00------
...........................................................................................TTGGGGCTCTGAAACTCCCA........................................................................2012.002.00---2.00----
...........................................................................................TTGGGGCTCTGAAACTCCCACCATT...................................................................252.000.00---2.00----
..........................................................................................TTTGGGGCTCTGAAACTCCCAT.......................................................................221.009.00-----1.00--
..........................................................................................TTTGGGGCTCTGAAACTCCCAC.......................................................................2211.001.00--1.00-----
...........................................................GGGCTAGGACCACAAAGCTGGGA.....................................................................................................2311.001.00--1.00-----
.........................................................................................................................................TCATGACTCCAAAACCAGGCAAGAGAA...................2711.001.00----1.00---
..........................................................................................TTTGGGGCTCTGAAACTCTCA........................................................................211.002.001.00-------
.....................................................................................ATGGCTTTGGGGCTCTGAAACTCCC.........................................................................2511.001.00-1.00------
.....................ATACTGCAGAGAAGCCAGGGAAGGA.........................................................................................................................................2511.001.00-----1.00--
..........................................................................................TTTGGGGCTCTGAAACTCGTGT.......................................................................221.002.00------1.00-
.....................ATACTGCAGAGAAGCCAGGGAAGGAAGA......................................................................................................................................2811.001.00----1.00---
.................................................................................................................................TCAGGATGTCATGACTCCAAAACCAGGC..........................2811.001.00----1.00---
..........................................................................................TTTGGGGCTCTGAAACTCCA.........................................................................201.006.001.00-------
.......................ACTGCAGAGAAGCCAGGGAAGGAAGAGT....................................................................................................................................281.000.00-----1.00--
...........................................................GGGCTAGGACCACAAAGCTGGTA.....................................................................................................231.000.00--1.00-----
............................................................................................................................................TGACTCCAAAACCAGGCAAGAGAAAGAGT..............291.000.00----1.00---
...........................................................................................TTGGGGCTCTGAAACTCCCACTTT....................................................................241.000.00--1.00-----
.............................................................................TGGGAAAAATGGCTTTGGGGCTCTGAA...............................................................................2711.001.00-1.00------
............................................................GGCTAGGACCACAAAGCTGGGA.....................................................................................................2211.001.00-1.00------
......................................................................................................................................ATGTCATGACTCCAAAACCAG............................2111.001.001.00-------
............................................................................................TGGGGCTCTGAAACTCCCACA......................................................................211.000.00---1.00----
...........................................................................................TTGGGGCTCTGAAACTCCCGTGA.....................................................................231.000.001.00-------
...........................................................................................TTGGGGCTCTGAAACTCGTGA.......................................................................211.000.00-1.00------
..........................................................................................TTTGGGGCTCTGAAACTCGT.........................................................................201.002.00-1.00------
..........................................................................................TTTGGGGCTCTGAAACTCCGTGT......................................................................231.006.00-1.00------
.......................................................................................................................................TGTCATGACTCCAAAACCAGGCAAGAGAAA..................3011.001.00-----1.00--
...................................................................................................................................AGGATGTCATGACTCCAAAACCAGGCAAGAGT....................321.000.00----1.00---
..........................................................................................TTTGGGGCTCTGAAACTCCCAA.......................................................................221.009.00---1.00----
..........................................................................................TTTGGGGCTCTGAAACTTCCA........................................................................211.000.00-1.00------
....................................................................................AATGGCTTTGGGGCTCTGAAACTCCCACC......................................................................2911.001.00-----1.00--
......................................................................................TGGCTTTGGGGCTCTGAAACTCC..........................................................................2311.001.00-1.00------
.....................................................................................ATGGCTTTGGGGCTCTGAAAC.............................................................................2111.001.00--1.00-----
..........................................................................................TTTGGGGCTCTGAAACTCCCAAGA.....................................................................241.009.001.00-------
...........................................................................................TTGGGGCTCTGAAACTCCCACCAAGT..................................................................261.000.001.00-------
...........................................................................................TTGGGGCTCTGAAACTGTGA........................................................................201.000.00-----1.00--
......................................................................................................................................................ACCAGGCAAGAGAAAGAGAGACCAGGCAGA...3011.001.00----1.00---
...........................................................................................TTGGGGCTCTGAAACTCGTGT.......................................................................211.000.001.00-------
..........................................................................................TTTGGGGCTCTGAAACTAGA.........................................................................201.000.00--1.00-----
..................................................................................................TCTGAAACTCCCACC......................................................................15160.060.06-0.06------

Antisense strand
TTATCAAGGAAGAGGAAGAAGATACTGCAGAGAAGCCAGGGAAGGAAGAGGTGAGGAGAGGGCTAGGACCACAAAGCTGGGAAAAATGGCTTTGGGGCTCTGAAACTCCCACCAAGATTTTTCTCAATCTCAGGATGTCATGACTCCAAAACCAGGCAAGAGAAAGAGAGACCAGGCAGAGGA
..................................................(((.(((((((((.....((.((((((((.......)))))))))))))))....))))))).......................................................................
..................................................51................................................................117................................................................
SizePerfect hitTotal NormPerfect NormSRR553577(SRX182783)
source: Frontal Cortex. (Frontal Cortex)
SRR553605(SRX182811)
source: Frontal Cortex. (Frontal Cortex)
SRR553578(SRX182784)
source: Cerebellum. (Cerebellum)
SRR553580(SRX182786)
source: Kidney. (Kidney)
SRR553581(SRX182787)
source: Testis. (testes)
SRR553607(SRX182813)
source: Testis. (testes)
SRR553606(SRX182812)
source: Kidney. (Kidney)
SRR553579(SRX182785)
source: Heart. (Heart)