ID: mmu-mir-7090
GENE: Ctnnb1(6)
chr9:120864066-120864315+


(7)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(25)
BRAIN 		(4)
CELL-LINE 		(2)
DGCR8.mut 		(9)
EMBRYO 		(11)
ESC 		(5)
FIBROBLAST 		(4)
HEART 		(3)
KIDNEY 		(6)
LIVER 		(1)
LUNG 		(4)
LYMPH 		(14)
OTHER 		(6)
OTHER.mut 		(1)
PIWI.mut 		(1)
SKIN 		(4)
SPLEEN 		(19)
TESTES 		(2)
TOTAL-RNA 		(2)
UTERUS

Sense strand
AAGGAGTTGGTAGGAATGTTACAGATGGTGAAACTGTCCATAAACAATAGAAGGGTATAGCAGCCATTTGACATGAGTTATCACTGGCAAGGTAGATTAGAAAAGCTGTGTGACATTCTAAAAAACTGAAGGAAATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAGGTGGGATGCAGGCACTGGGGCTTCATCTGACAGACCCAAGTCAGCGACTT
..............................................................................................................................................(((((((((.(((((.((...(((((....))))).....)).)))))))))))).))..................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT1()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206939(GSM723280)
other. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjLiverWT1()
Liver Data. (liver)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR206940(GSM723281)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR206941(GSM723282)
other. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM314558(GSM314558)
ESC wild type (454). (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR206942(GSM723283)
other. (brain)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR553586(SRX182792)
source: Testis. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGT.................................................21175.0018.007.004.006.009.003.001.00-1.0010.002.002.002.00-1.001.00--1.00-1.005.00---2.00-----1.00-1.00----3.001.00---1.00-1.00---1.001.00-------------1.002.001.00--1.00-1.00-------------1.00------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTT................................................22124.0018.00-4.00-2.001.001.00---1.001.001.00--1.00---5.00-------------1.00-1.00----------------1.00-------2.00-------1.00---1.00-------------------------------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGCAG..................................................21120.0020.005.003.002.002.001.00--2.00----1.00-----------1.00--------------------------1.00-----1.00----------1.00----------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTTT...............................................23119.0018.006.002.00--1.001.00-1.00-1.00--------------------1.00-------1.00---1.00----------------------------1.00--------1.001.00-----------------------------1.00---------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAG..................................................20118.0018.00-3.00-2.002.00-4.00----1.00------------1.00------1.00--1.001.00-------------1.00---------------1.00-------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAT..................................................2010.000.0010.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAGG.....................................................................................2219.009.00-1.00--1.00-----1.00-1.00-------------2.00------------------1.00-------------------------------------------1.00--------------1.00----------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAGGGC...................................................................................2419.009.00-2.001.00--1.00-3.00--------------------------------------------------2.00--------------------------------------------------------------
........................................................................................................................................................................................................GTGGGATGCAGGCACTGG................................1818.008.00------8.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGA.................................................2118.0018.001.00-2.001.00----------1.00-------------------------------------------------------------------1.00--------------------1.00-------------1.00---
.................................................................................................................................................................................GCCTTTGATGTCTGACTTTG.....................................................2017.007.00---------------4.00--------------------------------------------------------------1.001.00-------------------------1.00---------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGA.......................................................................................2216.006.00--------------------------------------------------------1.00---1.00-----------2.001.00-----------1.00-----------------------------------
.................................................................................................................................................................................................................................TCTGACAGACCCAAGTCAGCGAC..2315.005.00--3.00----1.00--------------1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTGCAG..................................................1915.005.00-----------1.00-----------4.00-------------------------------------------------------------------------------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAG......................................................................................2114.004.00-1.00--------------1.00----------1.00-----------------------------------1.00---------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAG......................................................................................2314.004.00-------------1.00-------1.00-----------1.00------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGCAT..................................................214.000.00-------------1.00-----------------------------------------1.00--------------------------------------1.00--------------1.00-----------
..............................................................................................................................................CTCAGAGTTGGGACACCATGAGG.....................................................................................2314.004.00-1.00-1.001.00---------------------------------1.00----------------------------------------------------------------------------------
..................................................................................................AGAAAAGCTGTGTGACATTCT...................................................................................................................................2113.003.00-------2.00-------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGT.......................................................................................2213.001.00--------------------------------------------------------------------------1.00------------1.00--1.00------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTA................................................2213.0018.00---1.00-1.00---1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGC....................................................1913.003.00----2.00---------------------------------------------1.00----------------------------------------------------------------------
................................................................................................................................................................................................................................ATCTGACAGACCCAAGTCAGCGACT.2513.003.00--1.00---------1.00----------------------1.00-------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACTGGGGCTTCATCTGACAGACCC.............2413.003.00------------------------------------3.00------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGAA................................................2213.0018.00---1.00---------------------------------------------------------2.00-----------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAGG.....................................................................................2412.002.00--------------------------------------------------------------1.00---1.00------------------------------------------------------
..........................................................................................................................................................................................................GGGATGCAGGCACTGGGGC.............................1912.002.00-----------------------------------------------------------------------------1.00-----------------------------------1.00-------
....................ACAGATGGTGAAACTGTCCAT.................................................................................................................................................................................................................2112.002.00----------------2.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................TGACAGACCCAAGTCAGCGA...2012.002.00--1.00------------------------------------1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................CCTTTGATGTCTGACTTTGCAG..................................................2212.002.00----------1.00------------------------1.00-------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGC....................................................1812.002.00-------------------------------2.00-----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GGGCTTCATCTGACAGACT..............192.000.00----------2.00--------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................TCTGACAGACCCAAGTCAGCGA...2212.002.00-------------------------2.00-----------------------------------------------------------------------------------------------
.......................................................................................................................AAAAAACTGAAGGAAATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAG..................................................8112.002.00----------------------------------------2.00--------------------------------------------------------------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAGGT....................................................................................2312.009.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................GGGCTAACAGGCCTGCCTTTGATGTCT............................................................2712.002.00---------------------------------------------------------------------2.00---------------------------------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGCAGT.................................................2212.0020.00--1.00-----------------------------------------------------------------------------------------------1.00----------------------
............................................................................................................................................TTCTCAGAGTTGGGACACCATGAG......................................................................................2412.002.00--------------1.00------------------------------------------1.00---------------------------------------------------------------
..................................................................................................................................................................................CCTTTGATGTCTGACTTTGC....................................................2012.002.00---------------------------------1.00--------------------------------------------------------------------1.00------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGAGA...............................................2312.0018.00-1.00-1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................ATGCAGGCACTGGGGCTTC..........................1912.002.00-------------2.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................CTCAGAGTTGGGACACCATGAGGG....................................................................................2412.002.00-1.00--1.00--------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTTA...............................................2312.0018.00----------------------------------------------------------------------------------------------------------1.00---------1.00----
...............................................................................................................................................TCAGAGTTGGGACACCATGAGA.....................................................................................2212.004.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................GGCTTCATCTGACAGACCC.............1912.002.00----------------------------------------------2.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................GGCACTGGGGCTTCATCTGACAGACCC.............2712.002.00-----------------1.00--------------------------------1.00----------------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAGA.....................................................................................2412.004.00--------------1.00-1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACTGGGGCTTCATCTGACAGACC..............2312.002.00-----------------1.00----------------------------------1.00--------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGAGT...............................................2312.0018.00-----1.00----------------------------------------------------------------------------------1.00--------------------------------
............................................................................GTTATCACTGGCAAGGTAGA..........................................................................................................................................................2012.002.00------------2.00------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................CTGACAGACCCAAGTCAGCGAC..2211.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................CAGAGTTGGGACACCATGAGGGC...................................................................................2311.001.00-------------------------------------------1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................GGGGCTTCATCTGACAG.................1711.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................GGTGGGATGCAGGCACTGGGGCT............................2311.001.00------------------------------------------------------------1.00------------------------------------------------------------
.....................................................................................................AAAGCTGTGTGACATTCTAAAAAACTGAAG.......................................................................................................................3011.001.00----------------------------------------------------------------------1.00--------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTAA...............................................2311.0018.00--------------------------------------------------------1.00----------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAT......................................................................................2311.006.00---------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCATT.................................................211.000.00--------------------------------------------------------------------------------------------1.00----------------------------
...............................................................................................................................................................................CTGCCTTTGATGTCTGACTTTGC....................................................2311.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGCACTGGGGCTTCATCTGAC...................2211.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
..............................................................................................................................................CTCAGAGTTGGGACACCATGAGGGC...................................................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TGCAGGCACTGGGGCTTCATCTGACAGACC..............3011.001.00-------------------------1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................TGCAGGCACTGGGGCTTC..........................1811.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................CTCAGAGTTGGGACACCATGA.......................................................................................2111.001.00------------------------------------------------------1.00------------------------------------------------------------------
...........................................................................................................................................................................AGGCCTGCCTTTGATGTCTGACTTTGCAG..................................................2911.001.00---------1.00---------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................ATCTGACAGACCCAAGTCAGCGAC..2411.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCACTGGGGCTTCATCTGACAGAC...............2411.001.00-------------------------------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................................................................................GGCTTCATCTGACAGACC..............1811.001.00--------------------------------------------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................GGGGCTTCATCTGACAGACCCA............2211.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATG........................................................................................2111.001.00-------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................CTCAGAGTTGGGACACCAT.........................................................................................1911.001.00-----------------------------------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTGCAGT.................................................2011.005.00--------------------------------------------------------------------------------------------------------------1.00----------
.............................................................................................AGATTAGAAAAGCTGTGTGACATT.....................................................................................................................................2411.001.00--1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................CCTGCCTTTGATGTCTGACTTTGCAG..................................................2611.001.00---------------------------1.00---------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGAAA...............................................2311.0018.00----------------------------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................AATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAG..................................................6711.001.00----------------------------------------1.00--------------------------------------------------------------------------------
..............................................................................................................................................CTCAGAGTTGGGACACCATGAGGT....................................................................................2411.004.00-1.00-----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCCGT.................................................2111.002.00--1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTAT...............................................2311.0018.00------------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GACAGACCCAAGTCAGCGACTT2211.001.00--1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTTC...............................................2311.0018.00--1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGGGGCTTCATCTGACAGAC...............2111.001.00-------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTTCAT..................................................211.000.00---------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTGCAGTT................................................2111.005.00-----1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTGGGATGCAGGCACTGGG...............................1911.001.00----------------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGGGCTTCATCTGACAGAAAG.............211.000.00--------------------------1.00----------------------------------------------------------------------------------------------
...........................................................................................................GTGTGACATTCTAAAAAACTGAAGGAAA...................................................................................................................2811.001.00-----------------------------------------------------------------------------------------------------------1.00-------------
..............................................................................................................................................CTCAGAGTTGGGACACCATGAGGAAA..................................................................................2611.004.00-------------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGGATGCAGGCACTGGGGCTTC..........................2311.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTG.....................................................1651.001.00---------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CTGGGGCTTCATCTGACAGA................2011.001.00---------------------------------------------------------------------------------------------1.00---------------------------
.............................................................................................................................................................................GCCTGCCTTTGATGTCTGACTTTGCAG..................................................2711.001.00-----------------------------------------------------1.00-------------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAA......................................................................................2311.006.00-------------------------------------------------------1.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................TGACAGACCCAAGTCAGCGAC..2111.001.00------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGC.................................................2111.0018.00-------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................TTCATCTGACAGACCCAA...........1811.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCACTGGGGCTTCATCTGACAGA................2311.001.00-----------------------------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGCAC..................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTGGGATGCAGGCACTGGGGCTTCATCTG.....................2911.001.00------------------------------------------------------------------------------------------------1.00------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAAA.....................................................................................221.000.00------------------------------------------------------1.00------------------------------------------------------------------
................................................................................................................................................................................................................CAGGCACTGGGGCTTCCTCT......................201.000.00-------------------------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................................................................................GGGATGCAGGCACTGGGGCT............................2011.001.00-----------------------------------------------------------------------------------------------------1.00-------------------
...............................................................................................................................GAAGGAAATAAAGTTCTCAGAGTT...................................................................................................2411.001.00--1.00----------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................GCACTGGGGCTTCATCTGAC...................2011.001.00---------------------------------------------------------------------------------------------------1.00---------------------
....................................................................................................................................................................................................................CACTGGGGCTTCATCTGACAGACCCAA...........2711.001.00--------------------------------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTCT...............................................2311.0018.00----------------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................CAGACCCAAGTCAGCGA...1711.001.00----------------------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................AGACCCAAGTCAGCGACTT1911.001.00---------------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................................................................TCTCAGAGTTGGGACACCATGAGGGCTAAC...............................................................................3011.001.00---------------------------------------------------------------------------1.00---------------------------------------------
.......................................................................................................................................................................................................GGTGGGATGCAGGCACTGGGGCTT...........................2411.001.00-----------------------------------------------1.00-------------------------------------------------------------------------
........GGTAGGAATGTTACAGATGGT.............................................................................................................................................................................................................................2111.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCAGGCACTGGGGCTTCATCTGA....................2311.001.00-----------------------------------------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................................................................GGATGCAGGCACTGGGGCT............................1911.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................GCAGGCACTGGGGCTTCATCTGACAGACC..............2911.001.00-----------------1.00-------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................GGATGCAGGCACTGGGGCTTT..........................211.000.00----------------------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGGCACTGGGGCTTCATCTGACAGACC..............2711.001.00-------------------1.00-----------------------------------------------------------------------------------------------------
...........AGGAATGTTACAGATGGTGAAACT.......................................................................................................................................................................................................................2411.001.00----------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTGCAGATA...............................................2211.005.00-------1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAGGG....................................................................................2311.001.00---------------------1.00---------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GTGGGATGCAGGCACTGGGGCTTCA.........................2511.001.00-----------------------------------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCAGTTTT..............................................2411.0018.00------------------------------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCATGT................................................221.000.00---------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................GGGGCTTCATCTGACAGACCC.............2111.001.00-----------------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................TTCTCAGAGTTGGGACACCATGAGGGCTA.................................................................................2911.001.00----------------------------------------------------------------------------------------------------------------1.00--------
..........................................................................................................................................................................................................GGGATGCAGGCACTGGGGCTTCATCT......................2611.001.00------------------------------------------------------------------------------------------------------------1.00------------
....................................................................................................................................................................................................................................GACAGACCCAAGTCAGCGACTTTT2411.001.00----------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................GGCTAACAGGCCTGCGTTC...................................................................191.000.00-------------------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................CTTTGATGTCTGACTTTGCAGTG................................................2311.0020.00---------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGGATGCAGGCACTGGG...............................1811.001.00----------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................................................................CTGCCTTTGATGTCTGACTTTGCAG..................................................2511.001.00------------------------------------------------------------------------------------------------------------------1.00------
......................................................................................................................................................................................................................CTGGGGCTTCATCTGACA..................1811.001.00------------------------------------------------------------------1.00------------------------------------------------------
...................................................................................................................................................................................................................................TGACAGACCCAAGTCAGCG....1911.001.00---------------------------------------1.00---------------------------------------------------------------------------------
...............................................................................................................................................TCAGAGTTGGGACACCATGAGGTA...................................................................................2411.009.00-----1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AGGGCTAACAGGCCTGCCTTTG..................................................................2211.001.00--------------------------------------------------------------1.00----------------------------------------------------------
..............................................................................................GATTAGAAAAGCTGTGTGACATTCT...................................................................................................................................2511.001.00-------------------------------------------------------------------------------------------------------------------1.00-----
................................................................................................................................................................................................................CAGGCACTGGGGCTTCATCTGACAG.................2511.001.00----------------------------------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................AGGCACTGGGGCTTCATCT......................1911.001.00---------------------1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TTTGATGTCTGACTTTGCCGTT................................................2211.002.00--------------------------------------------------------------------------------------1.00----------------------------------
...........................................................................................................................................................................................................................GCTTCATCTGACAGA................1530.670.67-------------------------0.67-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................GGGATGCAGGCACTGGG...............................1740.500.50------------------------------------------0.50------------------------------------------------------------------------------
........................................................................................................................................AAAGTTCTCAGAGTTGGG................................................................................................1820.500.50----------0.50--------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GATGTCTGACTTTGCAG..................................................1720.500.50--------------------------0.50----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................TTGATGTCTGACTTTGC....................................................1720.500.50----------------------------------------------------------------------------------------------------------------------0.50--
..................................................................................................................................................................................CCTTTGATGTCTGACTTTG.....................................................1920.500.50------------------------------------------------------------------------------------------------------------------------0.50
......................................................................................................................................................................................TGATGTCTGACTTTGCAG..................................................1820.500.50-----------------------------------------------------------------------------------------------------------------------0.50-
.......................................................................................................................................................................................................................TGGGGCTTCATCTGA....................1550.200.20--------------0.20----------------------------------------------------------------------------------------------------------

Antisense strand
AAGGAGTTGGTAGGAATGTTACAGATGGTGAAACTGTCCATAAACAATAGAAGGGTATAGCAGCCATTTGACATGAGTTATCACTGGCAAGGTAGATTAGAAAAGCTGTGTGACATTCTAAAAAACTGAAGGAAATAAAGTTCTCAGAGTTGGGACACCATGAGGGCTAACAGGCCTGCCTTTGATGTCTGACTTTGCAGGTGGGATGCAGGCACTGGGGCTTCATCTGACAGACCCAAGTCAGCGACTT
..............................................................................................................................................(((((((((.(((((.((...(((((....))))).....)).)))))))))))).))..................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormmjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT1()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR206939(GSM723280)
other. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjLiverWT1()
Liver Data. (liver)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR206940(GSM723281)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR206941(GSM723282)
other. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM314558(GSM314558)
ESC wild type (454). (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037937(GSM510475)
293cand2. (cell line)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR206942(GSM723283)
other. (brain)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		mjLiverWT3()
Liver Data. (liver)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR553586(SRX182792)
source: Testis. (testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
.................................................................................................................................................AGAGTTGGGACACCATGAGGGCT.................................................................................. 2311.001.00---------------------------------------------1.00---------------------------------------------------------------------------
..........TAGGAATGTTACAGAATCA............................................................................................................................................................................................................................. 191.000.00----------------------------------------------------------------------------------------------------1.00--------------------
.......................................................................................................................................................................................................................TGGGGCTTCATCTGATTG................. 1851.000.00-----------------------------------------------------------------------------------1.00-------------------------------------