ID: mmu-mir-7088
GENE: Mst1(3)
chr9:107983779-107983964+


(1)
AGO.mut 		(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
BRAIN 		(1)
CELL-LINE 		(1)
EMBRYO 		(2)
ESC 		(1)
KIDNEY 		(7)
LIVER 		(4)
OTHER 		(4)
OTHER.mut 		(2)
PIWI.ip 		(4)
SKIN 		(5)
TESTES 		(5)
TOTAL-RNA

Sense strand
GCACACACAGCTATACCACTCGAGTCTGTGCCATCTCTTCCAGAAGAAAGGCAAGTGGTGGTGAGGAGGGGAAACAGGCTGAGTAACAGGGGCCACGAGGCCTCAGGCCCTGTTGACCTTCCTCCATTGCTTCCAGATTATGTGCGGACCTGCATTATGGACAATGGGGTCAGCTACCGGGGCACT
....................................................(((..((((..(((((((..((((((((........((((((....)))))).)))).))))..)))))))))))..)))......................................................
..................................................51...................................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		mjLiverWT3()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		SRR037937(GSM510475)
293cand2. (cell line)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
................................................................................................................TTGACCTTCCTCCATTGCTTCC....................................................22177.0077.0048.0017.003.00-1.004.00-2.001.00----------------1.00-----
................................................................................................................TTGACCTTCCTCCATTGCTTCCA...................................................23121.0021.008.003.009.00----1.00-----------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAT..................................................24116.0021.006.002.004.00------------1.001.00---1.00--------1.00-
................................................................................................................TTGACCTTCCTCCATTGCTTC.....................................................21115.0015.009.006.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCA....................................................22112.0015.002.001.003.00---5.00----------------1.00-------
................................................................................................................TTGACCTTCCTCCATTGCTTCCT...................................................2319.0077.006.003.00-----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAAC...............................................................................................................2518.008.003.002.003.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCT....................................................2217.0015.004.002.001.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTT......................................................2016.006.003.002.00---1.00-------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGA..................................................................................................................2214.004.00--2.00-----2.00----------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGT.................................................254.000.00-2.001.00------------------1.00---------
..................................................GCAAGTGGTGGTGAGGAGGGGAAT................................................................................................................2414.002.00-1.002.001.00---------------------------
...................................................CAAGTGGTGGTGAGGAGGGGAAT................................................................................................................233.000.00---3.00---------------------------
...........................................................................................................................................................TATGGACAATGGGGTATT.............183.000.00----3.00--------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTA.....................................................2113.006.00-2.001.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCT.......................................................1913.003.001.001.00---------1.00-------------------
.................ACTCGAGTCTGTGCCATCTCTTCCAGAAGA...........................................................................................................................................3012.002.00------------2.00------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAA..................................................2412.0021.00-----------1.00------------1.00------
................................................................................................................TTGACCTTCCTCCATTGCTTAA....................................................2212.006.00--2.00----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAATTT.............................................................................................................272.000.00-2.00-----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAA.................................................................................................................2312.002.002.00------------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAACT..............................................................................................................2611.008.00-1.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCAAT..................................................2411.0015.00-1.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGTATT..............................................281.000.001.00------------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGTTT...............................................271.000.001.00------------------------------
..................................................................................................................GACCTTCCTCCATTGCTTCCAGA.................................................2311.001.00----1.00--------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCC...................................................2311.0077.001.00------------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCATAAT...............................................2711.0021.001.00------------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAT.................................................................................................................2311.004.001.00------------------------------
....................................................................GGGAAACAGGCTGAGTAAC...................................................................................................1911.001.00----1.00--------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCTTA.................................................2511.0077.001.00------------------------------
........................................................................................................................................................CATTATGGACAATGGGG.................1711.001.00---1.00---------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCG...................................................2311.0077.00-1.00-----------------------------
................CACTCGAGTCTGTGCCATCTCTTCCA................................................................................................................................................2611.001.00-------------1.00-----------------
..................................................GCAAGTGGTGGTGAGGAGGGTAAT................................................................................................................241.000.00---1.00---------------------------
...CACACAGCTATACCACTCG....................................................................................................................................................................1911.001.00--1.00----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGAAA.................................................................................................................231.000.00---1.00---------------------------
..........................................................................................GGCCACGAGGCCTCATGGA.............................................................................191.000.00--------------------------1.00----
..................................................GCAAGTGGTGGTGAGGAG......................................................................................................................1811.001.00--1.00----------------------------
..........................................................................................................................................................TTATGGACAATGGGGTCAGCTACCGG......2611.001.00-----------------1.00-------------
...................................................................................................................................................................ATGGGGTCAGCTACCGG......1711.001.00----------------------1.00--------
.............................................................................................................................................GTGCGGACCTGCATTATGGACAATGGGG.................2811.001.00-------------1.00-----------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCTT..................................................2411.0077.00--1.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCACC.................................................2511.0021.001.00------------------------------
..................................................................AGGGGAAACAGGCTGTC.......................................................................................................171.000.00----------------------------1.00--
................................................................................................................TTGACCTTCCTCCATTGC........................................................1811.001.00----1.00--------------------------
......................................................GTGGTGGTGAGGAGGG....................................................................................................................1670.140.14------------------------------0.14

Antisense strand
GCACACACAGCTATACCACTCGAGTCTGTGCCATCTCTTCCAGAAGAAAGGCAAGTGGTGGTGAGGAGGGGAAACAGGCTGAGTAACAGGGGCCACGAGGCCTCAGGCCCTGTTGACCTTCCTCCATTGCTTCCAGATTATGTGCGGACCTGCATTATGGACAATGGGGTCAGCTACCGGGGCACT
....................................................(((..((((..(((((((..((((((((........((((((....)))))).)))).))))..)))))))))))..)))......................................................
..................................................51...................................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		mjLiverWT3()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		SRR037937(GSM510475)
293cand2. (cell line)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
..........................TGTGCCATCTCTTCCAGAACTCG......................................................................................................................................... 232.000.00---------2.00---------------------
..................................................................................................................GACCTTCCTCCATTGCTTCCAGAT................................................ 2412.002.00----------2.00--------------------
................CACTCGAGTCTGTGCCATCTCTTCCAT............................................................................................................................................... 2711.000.00---------------------------1.00---
.................ACTCGAGTCTGTGCCATCTCTTCCAGAA............................................................................................................................................. 2811.001.00--------------1.00----------------
.................................................................................................................................................................CAATGGGGTCAGCTAAT........ 171.000.00-------------------1.00-----------
.....................GAGTCTGTGCCATCTCTTCCAGAAGAAA......................................................................................................................................... 2811.001.00--------------1.00----------------
............................................................................................................CCTGTTGACCTTCCTCATGC.......................................................... 201.000.00------------------1.00------------