ID: mmu-mir-7041
GENE: Lrig1(1)
chr6:94556308-94556557-


(1)
AGO.mut 		(2)
AGO1.ip 		(9)
AGO2.ip 		(2)
AGO3.ip 		(21)
BRAIN 		(7)
CELL-LINE 		(1)
DCR.mut 		(3)
DGCR8.mut 		(12)
EMBRYO 		(6)
ESC 		(7)
FIBROBLAST 		(2)
HEART 		(2)
KIDNEY 		(13)
LIVER 		(3)
LYMPH 		(11)
OTHER 		(6)
OTHER.mut 		(2)
PANCREAS 		(2)
PIWI.ip 		(1)
PIWI.mut 		(8)
SKIN 		(5)
SPLEEN 		(16)
TESTES 		(8)
TOTAL-RNA

Sense strand
AAATTAATTTTACACGTATACTTAGGCACACAAGACTAAGACATGGTTGGTCTAGCTCCTCTCCACATACACATTCCAGGGGGTGGGGAGGGGAGAGACAGGGTGGTTATGAAGGCAGTGGTAAGCTGGACTCATCTTCCAATAGTGCCTCTGAGAGGGAATGGAGACTCAGTTGACCTCTGGTTCTCTTCTTCCCTCAGCACACAGTGGCTCTGCTGTATGTAGTGACTGCAGTACTGACACAGCCTAC
..........................................................................................................................................................(((((((.(((((..(((.......)))..)))))..)))))))....................................................
....................................................................................................................................................149................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjLiverWT1()
Liver Data. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		mjLiverWT3()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjTestesWT3()
Testes Data. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553584(SRX182790)
source: Heart. (Heart)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR206942(GSM723283)
other. (brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR206939(GSM723280)
other. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		GSM416732(GSM416732)
MEF. (cell line)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGA.................................................21147.002.001.00-12.00--1.00-5.00-5.00-2.00-2.00--1.00--1.00--1.00---1.00----------------2.00--------2.001.00----1.00---1.00-----1.001.00-------1.00--1.00----------1.001.00-----------------1.00-------1.00----
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACC........................................................................25136.0036.005.001.00-5.00-1.001.001.002.007.00----3.00--1.001.001.001.00-----------------1.001.00--1.00--------------------------------------------------1.00-------------1.00---1.00-----------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCAGA.................................................22134.003.00-1.003.00-7.001.001.002.00--1.002.00-2.00------1.002.00---2.001.001.00--------1.00------1.00------1.00--------2.00--------1.00--------------1.00---------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGT.................................................21127.002.002.004.00-1.00-1.002.001.00---1.00-1.00---1.00-----------1.00-3.00---------------------1.00----------------1.00-1.00---------------1.00-1.00---1.00----1.00-----1.00---1.00-------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGAC.........................................................................24122.0022.00--1.002.00-2.00--1.00--------1.003.00----5.00---------2.00-----1.00------1.00--------------1.00------------------------1.00----------------------------1.00-------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTT............................................................................21121.0021.00-1.00----2.001.00--------1.001.00------1.00---4.00--1.00--1.00-1.00--1.00------1.00---------1.00-----1.00----1.00-----------1.00-------1.00-----------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGA..........................................................................23119.0019.00-3.00-3.00--------------1.00-----1.00-1.00---------1.00-----1.00-1.00--1.00-1.00-----------1.00-2.00-----------1.00--------------------------------------------1.00--
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGT.............................................................................22117.0017.00----------3.00---2.00-1.00-------1.00-----1.00--------------2.00--1.00--1.00-----2.00-----------1.00-------------------------1.00--------1.00------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCT.......................................................................26116.0016.001.00--2.00--2.001.003.00--1.00----1.00--1.00------1.00----------1.00----------------1.001.00-------------------------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCAGT.................................................22115.003.002.002.001.00---1.00---------------1.00-----------1.001.00-2.001.00-------------------------------------------1.00------1.00---------------------------1.00-----
........................................................................................................................................................GAGAGGGAATGGAGACTCAGT.............................................................................21114.0014.00-------1.00--1.00----3.00----4.00-----------------------2.00---------1.00-----------2.00--------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGTT................................................22113.002.002.002.001.00---1.00---1.001.00-1.00-------1.00------------1.00-----1.00-----------------------1.00----------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCAGA.................................................23113.008.001.00-2.00-3.00---1.00----1.00-----1.00---------1.00---1.00--------------1.00----------------1.00---------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCAGT.................................................23112.008.00-1.001.00-3.00-------------1.001.00------1.00-----------1.00-------------------1.00------1.00---------------1.00-----------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAA................................................22111.002.00-----1.00--1.00---9.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACA........................................................................2518.0022.003.00------------------1.00-------3.00----------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCAG..................................................2218.008.00----6.00--------------------1.00--------------------------------------1.00----------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTAA..........................................................................2317.0021.001.00----1.00--1.00--1.00----1.00-------1.00----------------1.00---------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGT.............................................................................2017.007.00-1.00-1.00--1.00---1.00-------1.00---------------------1.00------------------------------------------------------------------------1.00---------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTA...........................................................................2216.0021.00---1.00-------------------------------------1.00---1.00---------1.00----------------------------1.00----------------------------------1.00---
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTG...........................................................................2216.006.00-1.00-2.00------------------------------------1.001.00------------------------------------------------------------1.00--------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAT................................................2215.002.002.00-----1.00-----------------------2.00--------------------------------------------------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGTTGAC.........................................................................2615.005.00---------------5.00-----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCAGC.................................................2215.005.00--1.00----1.00---1.00-2.00-------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAAT...............................................2314.002.00-----1.001.00---1.00-----------------------------------1.00----------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGTGACTGCAGTACTGACACAGCCT..2514.004.00----------1.00---1.00-2.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCAGTT................................................2413.008.00-------------------------2.00-----------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCAG..................................................2113.003.00-----------------------------2.00--------------------------1.00------------------------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGTAAT..........................................................................2512.0017.00--------2.00------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGTA............................................................................2312.0017.00-----------------1.00------------------------------------------------------------------------------------------1.00--------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAG..................................................2012.002.001.00----------------------------------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGTGACTGCAGTACTGACAC.......2012.002.00-----1.00------------------------------------------------------------------------1.00--------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAGTT............................................................................2212.002.00----------------------2.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCA...................................................2112.002.00-1.00---------------------------------------------------------------------1.00---------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAG..............................................................................2112.002.00-----1.00-------------------------------------------------------------------1.00-------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAG..............................................................................1911.001.00-----------------------------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCTT......................................................................2711.0016.00-1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCAGTAAA..............................................2511.003.00----------------------1.00----------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCA.......................................................................2611.0036.00--------1.00------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCGGA.............................................................................211.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................TGCAGTACTGACACAGCTG..191.000.00--------------------------------1.00------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCATAA................................................221.000.00------------1.00--------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGCTAAT.............................................251.000.001.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCGAAT....................................................................2911.0036.00---1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................................................................AAGCTGGACTCATCTTCCAAT...........................................................................................................2111.001.00----------------1.00----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAAGC................................................221.000.00-----------1.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGTAG...............................................2311.002.00----------------------------------------------------------------------------------------------------1.00----------------------
........................................................................................................................................................................................................................TGTATGTAGTGACTGCAGTAC.............2111.001.00--------------------------------------------------------------------------------------------------------------------1.00------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGAACT.......................................................................2611.0019.00------------------------------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................CTCTGAGAGGGAATGGAGACTCAT..............................................................................2411.001.00----------------------------------------------------------------------------1.00----------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGAAA........................................................................2511.0019.00-------------------------------------------------------------------1.00-------------------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAGTTTT..........................................................................2411.002.00-1.00-------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAGTTT...........................................................................2311.002.00-1.00-------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................AGTGGCTCTGCTGTATGTAGTGACTGC..................2711.001.00-------------------------------------------------------------------------------------------------------1.00-------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAGA.............................................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTAA...........................................................................2211.007.00--------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCTCT.....................................................................2811.001.00------------------------------------------------------------1.00--------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTC...........................................................................2211.0021.001.00--------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................AGTGACTGCAGTACTGAC.........1811.001.00--------------1.00------------------------------------------------------------------------------------------------------------
................TATACTTAGGCACACTAT........................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------------------------------------1.00---------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGTTA...........................................................................241.000.00----------1.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TCTGAGAGGGAATGGAGACT.................................................................................2011.001.00------------------------------------------------------------------------------------------------1.00--------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCATT.................................................211.000.00-1.00-------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAATT................................................221.000.001.00--------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTT...........................................................................2211.0021.00---1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGTAA...........................................................................2411.0017.00----------------------------------------------------------------------------------------------------------------1.00----------
...........................................................................................................................................................AGGGAATGGAGACTCAGTTGAC.........................................................................2211.001.00------1.00--------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CTGAGAGGGAATGGAGACTCAGTTGAC.........................................................................2711.001.00------------------------------------------------------------1.00--------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGTTT...............................................2311.002.00----------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGGT................................................2211.002.00------------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGAT.........................................................................2411.0019.00------------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................GGTTCTCTTCTTCCCTCAGGT................................................211.000.00----------------------------------------------------------------------------------------------------------1.00----------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAG..............................................................................2011.001.00-------------------------------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................................................TTCTCTTCTTCCCTCAGAAGT..............................................211.000.001.00--------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCAGTTGACCTC......................................................................2811.001.00---------------------------------------------------1.00-----------------------------------------------------------------------
.................................................................................................................................................TGCCTCTGAGAGGGAATGGAGACT.................................................................................2411.001.00-----1.00---------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................GAGAGGGAATGGAGACTCA...............................................................................1911.001.00------------------------1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TCTGCTGTATGTAGTGACTGC..................2111.001.00-----1.00---------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTAGA.........................................................................2411.0021.00--------------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAGT...............................................2311.002.00--------------------------------------------------------------------------------------------------1.00------------------------
.......................................................................................................................................................................................TTCTCTTCTTCCCTCAGAAGA..............................................211.000.00-----------------------------------1.00---------------------------------------------------------------------------------------
..................................................................................................................................................................................TCTGGTTCTCTTCTTCCCTCAGTA................................................2411.008.00-------------------1.00-------------------------------------------------------------------------------------------------------
..................................................................................GTGGGGAGGGGAGAGTAT......................................................................................................................................................181.000.00--------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCTCATA.................................................221.000.00----1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCACGA................................................221.000.00-----------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACT........................................................................2511.0022.00-----------------1.00---------------------------------------------------------------------------------------------------------
.......................................................................................................................................................TGAGAGGGAATGGAGACTCAGA.............................................................................2211.002.00-1.00-------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGAGGGAATGGAGACTCAGTTGACCTTT.....................................................................2811.0016.001.00--------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................CTCTGAGAGGGAATGGAGACTCA...............................................................................2311.001.00-----------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAAA...............................................2311.002.00-----------------1.00---------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TGGTTCTCTTCTTCCCTCAGAGA...............................................2311.002.00-----1.00---------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................CTGAGAGGGAATGGAGA...................................................................................1730.330.33---------------------------0.33-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCT.....................................................1840.250.25-------------------------------------------------------------------------------------------------------------------------0.25-

Antisense strand
AAATTAATTTTACACGTATACTTAGGCACACAAGACTAAGACATGGTTGGTCTAGCTCCTCTCCACATACACATTCCAGGGGGTGGGGAGGGGAGAGACAGGGTGGTTATGAAGGCAGTGGTAAGCTGGACTCATCTTCCAATAGTGCCTCTGAGAGGGAATGGAGACTCAGTTGACCTCTGGTTCTCTTCTTCCCTCAGCACACAGTGGCTCTGCTGTATGTAGTGACTGCAGTACTGACACAGCCTAC
..........................................................................................................................................................(((((((.(((((..(((.......)))..)))))..)))))))....................................................
....................................................................................................................................................149................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjLiverWT1()
Liver Data. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR394084(GSM855970)
"background strain: C57BL6/SV129cell type: KR. (dicer cell line)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		mjLiverWT3()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjTestesWT3()
Testes Data. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR553584(SRX182790)
source: Heart. (Heart)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR206942(GSM723283)
other. (brain)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR206941(GSM723282)
other. (brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR037922(GSM510460)
e12p5_rep4. (embryo)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		RuiDGCR8WT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR206939(GSM723280)
other. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR037919(GSM510457)
e12p5_rep1. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		GSM640576(GSM640576)
small RNA in the liver with paternal low prot. (liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		GSM416732(GSM416732)
MEF. (cell line)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
...............................................................................................................................................................................................................TGGCTCTGCTGTATGTAGTGACT.................... 2313.003.00---------------------3.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................ATGTAGTGACTGCAGGT.............. 171.000.00------------------------------------------------------------------------------------------------------------------1.00--------
.................................................................................................................................................................................CTCTGGTTCTCTTCTCAC....................................................... 181.000.00--------------1.00------------------------------------------------------------------------------------------------------------
...............................................................................................................................GGACTCATCTTCCAATAGTGCCTCTGA................................................................................................ 2711.001.00-------------------------------------------------------------------------------------1.00-------------------------------------
..........................................................................................................................................................................................TCTTCTTCCCTCAGCTCG.............................................. 181.000.00--------------------------------1.00------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CACAGTGGCTCTGCTCTC.............................. 181.000.00--------------------------------------------------------------------------1.00------------------------------------------------
...................................................................................................................................................................................CTGGTTCTCTTCTTCCCT..................................................... 1840.250.25--------------------------------0.25------------------------------------------------------------------------------------------
.......................................................................................................................................CTTCCAATAGTGCCT.................................................................................................... 1580.120.12--------------------------------------------------------------------------------------------------------------------------0.12