ID: mmu-mir-6927
GENE: Mllt6(15)
chr11:97538324-97538511+


(1)
AGO.mut 		(7)
AGO2.ip 		(4)
B-CELL 		(19)
BRAIN 		(5)
CELL-LINE 		(1)
DGCR8.mut 		(12)
EMBRYO 		(12)
ESC 		(4)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(10)
OTHER 		(10)
OTHER.mut 		(6)
PIWI.ip 		(2)
PIWI.mut 		(1)
SKIN 		(7)
SPLEEN 		(31)
TESTES 		(2)
THYMUS 		(4)
TOTAL-RNA 		(1)
UTERUS

Sense strand
GCCGGCCACTAACGGCCCCATCCCAGGGCCCTATGGACTGCTTCCTCAAGGTGAGGGGATCCAGCCCAGGCTAGGGGGAAGAATCCCTGCCCGTGGCCTGAGCTGGCTCCCCTGCAGCTCCCGTCTCTTCTCGGTCAGCTGGCAGCAGTGACTCCCTGAGCGTCAGCAAGAGCCCTCCCGGGAAGAAC
..................................................((.((((((.(((((.(((((((.(((..((.....)).))).))))))).))))).)))))))).........................................................................
..................................................51....................................................................121.................................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206942(GSM723283)
other. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR014235(GSM319959)
2 dpp total. (testes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR525237(SRA056111/SRX170313)
Mus musculus domesticus miRNA sequencing. (Blood)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjTestesWT3()
Testes Data. (testes)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR206940(GSM723281)
other. (brain)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR073955(GSM629281)
total RNA. (blood)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206941(GSM723282)
other. (brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)
................................................................................................CCTGAGCTGGCTCCCCTGCAG.......................................................................21126.0026.00-2.004.002.00--1.00-3.00--2.00------1.00-----1.001.00-1.00---------------1.00----1.00--1.00--------1.001.00-----1.00------1.00-------------------1.00--------------------
..................................................GTGAGGGGATCCAGCCCAGGCT....................................................................................................................22119.0019.00-6.00----1.00--1.00-----2.00-1.00---1.00-----1.00--1.001.00------------------------------1.00------------------------1.001.00---------------------1.00----
................................................................................................CCTGAGCTGGCTCCCCTGCAGT......................................................................22116.0026.00-4.001.00-1.00----1.002.00-----1.00----1.00-------1.00-------------1.00---------------------1.00--------------------1.00----1.00-----------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAT..................................................................................................................24115.006.00-1.00---1.00---1.00---3.00-----3.00-----------1.00------1.001.00-------------------------------1.00-------1.00----------------1.00------------------
..................................................GTGAGGGGATCCAGCCCAGGAT....................................................................................................................22212.505.0012.50------------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGC.....................................................................................................................21112.0012.00-1.001.00-2.00----1.00--------1.00----1.001.00------------1.001.00---------------------------------------------------------------1.00--1.00---------
...................................GACTGCTTCCTCAAGGTGAGGG...................................................................................................................................22112.0012.0012.00------------------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGC......................................................................22111.0011.00--1.00-1.00---2.001.00--------------1.00--------1.00--1.001.00----------1.00----------------------------------1.00-------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCAG.......................................................................24110.0010.00--3.00--------3.001.00--------1.00------------------------------------------------------------1.00------------------1.00-------------
..................................................GTGAGGGGATCCAGCCCAGGCTTT..................................................................................................................2418.0019.00-1.00----2.001.00----1.00-------------------------------1.00----------1.00---1.00-------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTT.....................................................................2317.0026.00--------1.00-5.00--------------1.00-----------------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGGA.....2717.007.00-----1.00-1.00------2.00-1.00------------------------1.00-------1.00-----------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTA...................................................................................................................2316.006.00----1.00-1.001.00-------------------1.00---1.00------------------------1.00----------------------------------------------------------
.................................................................................................CTGAGCTGGCTCCCCTGCAG.......................................................................2016.006.00--2.00-----1.00--------------------------2.00-----------------------------------------------------------------------1.00-------
...................................................TGAGGGGATCCAGCCCAGGC.....................................................................................................................2015.005.00----------------------5.00--------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTTA..................................................................................................................2415.0019.00-1.00-------1.00------------------1.00-1.00---------------------------------------------1.00--------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCAGT......................................................................2515.0010.00--1.00------------------1.00-----------2.00-------------------------------------------1.00-------------------------------------
..................................................GTGAGGGGATCCAGCCCAGG......................................................................................................................2025.005.00---0.500.500.50---0.50------------------0.50----------------0.50-1.50----------------0.50--------------------------------------------------
..........AACGGCCCCATCCCAGGGCCCT............................................................................................................................................................2215.005.00---4.00------------------------------1.00--------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGCT.....................................................................2314.004.00----1.00-------------------------------1.00--------------1.00-----------------1.00---------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGT......2614.003.00--------------3.00-----------------------------------------------------------------------------1.00----------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGA......................................................................2214.0026.00--1.00---------------1.00---------1.00-------------------------------------------------------------------------------1.00------
....................TCCCAGGGCCCTATGGACTGCTTCCTC.............................................................................................................................................2713.003.00--------------------1.00-----------2.00----------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGC.........................................................................2213.003.00--------2.00-------------------------------------------------------------------------------------------------1.00--------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCA........................................................................2313.003.00-------1.00-1.00----------------------------1.00----------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTATT.................................................................................................................2513.006.00---1.00--1.00------1.00-----------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTT...................................................................................................................2313.0019.00-2.00--------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGG.......2513.003.00--------------1.00-----1.00--------------------1.00-------------------------------------------------------------------------
.................................TGGACTGCTTCCTCAAG..........................................................................................................................................1713.003.00-----------------------2.00----------------1.00--------------------------------------------------------------------------
...........................................................................................................................................TGGCAGCAGTGACTCCCTGAGCGTCA.......................2612.002.00-----------------------------------------1.00--------1.00----------------------------------------------------------------
..................................................................................................................................................AGTGACTCCCTGAGCGTCAGCAAGAGC...............2712.002.00----------------1.00-----------------------------1.00--------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCAA...................................................................................................................2312.0012.00----1.00-1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................CTGGCAGCAGTGACTCCCTGAGCGT.........................2512.002.00-----2.00-------------------------------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGA.........................................................................222.000.00-----------------1.00----------------------------------------------------------------------------------------------1.00--
..................................................GTGAGGGGATCCAGCCCAGGA.....................................................................................................................2122.005.00---0.50-----------0.50-1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGGAA....2812.002.00------------------------------------------2.00------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAAT.................................................................................................................2512.006.00----1.00----------------------------------------------------------1.00---------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGCA.....................................................................2312.0011.00------------1.00--------------1.00---------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAAA.................................................................................................................2512.006.00-------------------2.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................TGGCAGCAGTGACTCCCTGAGCGTCAGC.....................2812.002.00-----------------------------------------------------1.00---------------------1.00---------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTTT....................................................................2412.0026.00-1.00-----------------------------------------------------------------------1.00-----------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTATA.................................................................................................................2512.006.00-1.00--------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGG......2612.002.00----------------1.00---1.00----------------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTT..........................................................................212.000.00---------------------------------------------------------------1.00--1.00------------------------------------------------
...............................................................................................GCCTGAGCTGGCTCCCCTGCAG.......................................................................2212.002.00---------------------1.00------------------------------------------1.00--------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCCGA......................................................................2211.001.00-----------------1.00-------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTGAA.................................................................................................................2511.0019.00-------------1.00-----------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGC.........................................................................1911.001.00---------------------------------------------------------------------------------------------1.00---------------------
...............................................................................................................................................AGCAGTGACTCCCTGAGCGTCAGCAAGA.................2811.001.00-------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTA.....................................................................2311.0026.00---------------------------------------------1.00---------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTACT.................................................................................................................2511.006.00------------1.00------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTTAAA................................................................................................................2611.0019.00-------------------------------------------------------1.00-----------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGT.................................................................................................................2511.001.00--------------------------1.00----------------------------------------------------------------------------------------
................................................................................................................................................GCAGTGACTCCCTGAGCGTCAGC.....................2311.001.00-------------------------------------------------------------------------------------------------------1.00-----------
..................................................GTGAGGGGATCCAGCCCAGGCTAG..................................................................................................................2411.001.00------------------------------1.00------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTATAAA...............................................................................................................2711.006.00---------------------------------------1.00---------------------------------------------------------------------------
.................................................................................................................................................CAGTGACTCCCTGAGCGTCAGCAAGAGC...............2811.001.00-----1.00-------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGGT................................................................................................................2611.001.00--------------------------1.00----------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCATA......................................................................221.000.00--------------------------------------------------------------------1.00----------------------------------------------
.......................................................................TAGGGGGAAGAATCCGGC...................................................................................................181.000.00-----------------------------------------------------------------------------------------------------------------1.00-
..................................................GTGAGGGGATCCAGCCCAGGCTTTAA................................................................................................................2611.0019.00------1.00------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CTCCCTGAGCGTCAGCAAGAGCCCTCC..........2711.001.00----------------------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................GCTGGCAGCAGTGACTCCCTGAGCGTCA.......................2811.001.00-----1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CCTGAGCGTCAGCAAGAGCC..............2011.001.00-----------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................CTGAGCTGGCTCCCCTGCAGA......................................................................2111.006.00--1.00----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCG........2411.001.00--------------------------------1.00----------------------------------------------------------------------------------
........................................................................AGGGGGAAGAATCCCTGCCCGTGG............................................................................................2411.001.00---------------1.00---------------------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGAAA.......................................................................241.000.00------------1.00------------------------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCAGAA.....................................................................2611.0010.00------------1.00------------------------------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCC..............1811.001.00-----1.00-------------------------------------------------------------------------------------------------------------
........................AGGGCCCTATGGACTGCT..................................................................................................................................................1811.001.00---------------------------------------1.00---------------------------------------------------------------------------
...........................................................................................................................................TGGCAGCAGTGACTCCCTGAGCGTCAG......................2711.001.00-------1.00-----------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCAAA..................................................................................................................2411.0012.00--------------------------------------------------------------1.00----------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGAAA.......................................................................211.000.00------------------------------------------------------------------------1.00------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTTTT...................................................................2511.0026.00--------------------------1.00----------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCAAA......................................................................2511.003.00--------------------------------------------1.00----------------------------------------------------------------------
............................................................................................GTGGCCTGAGCTGGCTCCCCTGCAGCT.....................................................................2711.001.00-----------------------------------------------1.00-------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGGA................................................................................................................2611.001.00----------------1.00--------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAG.......................................................................................................................1921.001.00------------------0.50----------------------------------------------0.50-------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTTAT.................................................................................................................2511.0019.00----------------------------------------------------------------------------------------------------1.00--------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGAT................................................................................................................2611.001.00-1.00-----------------------------------------------------------------------------------------------------------------
..............................................................................................................................................CAGCAGTGACTCCCTGAGCGTCAGCAAG..................2811.001.00-------1.00-----------------------------------------------------------------------------------------------------------
.................................................................................................CTGAGCTGGCTCCCCTGCAGT......................................................................2111.006.00--------------------------------------------------------------------------------------------------1.00----------------
................................................................................................................TGCAGCTCCCGTCTCTTCTCGGT.....................................................2311.001.00----------------------------------------1.00--------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGGAAAT..3011.002.00-----------------------------------------------------1.00-------------------------------------------------------------
.................................TGGACTGCTTCCTCAAGCTGG......................................................................................................................................2111.003.00-----------------------------1.00-------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCAT...................................................................................................................2311.0012.00-1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCCGT......................................................................2211.001.00----------------------------1.00--------------------------------------------------------------------------------------
......................................................................................................................TCCCGTCTCTTCTCGGTCAG..................................................2011.001.00----------------------------------------1.00--------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGAT........................................................................231.000.00-----------------------1.00-------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTTTT.................................................................................................................2511.0019.00-----------------------------------------------------------1.00-------------------------------------------------------
.................................................................................................................GCAGCTCCCGTCTCTTCTCGG......................................................2111.001.00-------------------------------------1.00-----------------------------------------------------------------------------
...................................................TGAGGGGATCCAGCCCATGCT....................................................................................................................211.000.00--------------------------------------------------1.00----------------------------------------------------------------
.......................CAGGGCCCTATGGACTGCT..................................................................................................................................................1911.001.00-------1.00-----------------------------------------------------------------------------------------------------------
........................AGGGCCCTATGGACTGCTTC................................................................................................................................................2011.001.00---------------------------------------------------------------------------------------------------------------1.00---
...........................................................................................................................................TGGCAGCAGTGACTCCCTGAGCGTCAGCA....................2911.001.00-------------------------------------------------------------------------------------------------1.00-----------------
.............................................................................................TGGCCTGAGCTGGCTCCGTGA..........................................................................211.000.00---------------1.00---------------------------------------------------------------------------------------------------
...................................GACTGCTTCCTCAAGGTGCGGG...................................................................................................................................221.000.001.00------------------------------------------------------------------------------------------------------------------
.................................TGGACTGCTTCCTCAAGC.........................................................................................................................................1811.003.00---------------------------------------------------------1.00---------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCAT.......................................................................2411.003.00-------1.00-----------------------------------------------------------------------------------------------------------
...................................................TGAGGGGATCCAGCCCAGGCTA...................................................................................................................2211.001.00---------------------------------------------------------------------------------1.00---------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGA.................................................................................................................2511.001.00----1.00--------------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTAA....................................................................2411.0026.00-----------1.00-------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAAA......................................................................221.000.00---------------1.00---------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCAAGT.................................................................................................................2511.0012.00--------------------------------------------1.00----------------------------------------------------------------------
..........................................................................................................................................CTGGCAGCAGTGACTCCCTGAGCG..........................2411.001.00---1.00---------------------------------------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCGTGA...........................................................................201.000.00-----------------1.00-------------------------------------------------------------------------------------------------
.......................CAGGGCCCTATGGACTGCTTCCTCA............................................................................................................................................2511.001.00--------------------1.00----------------------------------------------------------------------------------------------
........................................................................................................................................................................AGAGCCCTCCCGGGAAGAA.1911.001.00---------------------------------------------1.00---------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTATAT................................................................................................................2611.006.00-1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................CTCCCGTCTCTTCTCGGTCAG..................................................2111.001.00----------------------------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................................GTCAGCAAGAGCCCTCCCGGGAAGAAC2711.001.00-----1.00-------------------------------------------------------------------------------------------------------------
..........................................................................................................................GTCTCTTCTCGGTCAGCTGGCAGC..........................................2411.001.00-----------------------------------1.00-------------------------------------------------------------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCCGT......................................................................2511.003.00----------------------------------------------------1.00--------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTGTT.................................................................................................................2511.0019.00--------------------------1.00----------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAT.......................................................................211.000.00-1.00-----------------------------------------------------------------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGGAT.....2711.003.00------------------------------------------1.00------------------------------------------------------------------------
..CGGCCACTAACGGCCCCATCCCAGGGCCC.............................................................................................................................................................2911.001.00--------------------1.00----------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAA..................................................................................................................2411.006.00-----1.00-------------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGCAAA...................................................................2511.0011.00-------------1.00-----------------------------------------------------------------------------------------------------
.................................................................................................CTGAGCTGGCTCCCCTGCAGAA.....................................................................2211.006.00-------------------------------------------------------------------------------------1.00-----------------------------
...........................................................................................................................................................CTGAGCGTCAGCAAGAGCC..............1911.001.00------------------------1.00------------------------------------------------------------------------------------------
........................................................................AGGGGGAAGAATCCCCCT..................................................................................................181.000.00----------------------------------------------------------1.00--------------------------------------------------------
.................................................................................................................................................CAGTGACTCCCTGAGCGTCAGCAGAG.................261.000.00-------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGAA.....................................................................2311.0026.00-------------------------1.00-----------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGAA........................................................................201.000.00--------------------------------------------------------1.00----------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGTAT....................................................................2411.0026.00-------------------------------------------------------------1.00-----------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGAAT....................................................................2411.0026.00------------------------------------1.00------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCCTGCAGCTTT...................................................................2511.004.00-1.00-----------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTTTAT................................................................................................................2611.0019.00------------------------------------------------------------------------------------------1.00------------------------
.............................................................................................TGGCCTGAGCTGGCTCCCCTGCC........................................................................2311.003.00-----------1.00-------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAGG.................................................................................................................2511.001.00-----------------------------------------------------------------------------------------1.00-------------------------
...................................................................................................................................................GTGACTCCCTGAGCGTCAGCAAGAGCC..............2711.001.00---------------------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................................TGAGCGTCAGCAAGAGCCCTCCCGAA......2611.001.00-------------------------------------------------1.00-----------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCTAAAAT...............................................................................................................2711.006.00------------------1.00------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGCA....................................................................................................................2211.0012.00------1.00------------------------------------------------------------------------------------------------------------
..................................................................................................TGAGCTGGCTCCCCTGCAGCA.....................................................................211.000.00--------------------------------------------------------------------------------------------------------1.00----------
.................................TGGACTGCTTCCTCAAGGTGAGGGG..................................................................................................................................2511.001.00------------------------------------------------------------------------------1.00------------------------------------
....................................................................GGCTAGGGGGAAGAAAAA......................................................................................................181.000.00-----------------------------------------------------------------------------------------------1.00-------------------
...........................................................................................................................................TGGCAGCAGTGACTCCCTGAGCGTC........................2511.001.00--------------------------------------------------------------------------------1.00----------------------------------
...............................TATGGACTGCTTCCTCAAGCTG.......................................................................................................................................221.000.00-------------------------------------------1.00-----------------------------------------------------------------------
..............................................................................................GGCCTGAGCTGGCTCCCC............................................................................1820.500.50---0.50---------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGT.....................................................................................................................2120.505.00---------0.50---------------------------------------------------------------------------------------------------------
.........................................................................................................................................GCTGGCAGCAGTGACTCCC................................1920.500.50------------------------------------------------------------------------------------------------------------------0.50
..................................................GTGAGGGGATCCAGCCCAGCCT....................................................................................................................2220.501.00-0.50-----------------------------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGAAA....................................................................................................................2220.501.00------------------0.50------------------------------------------------------------------------------------------------
......................CCAGGGCCCTATGGACTG....................................................................................................................................................1820.500.50----------------------------------------------0.50--------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGAG....................................................................................................................2220.505.00-----------------------0.50-------------------------------------------------------------------------------------------
..................................................GTGAGGGGATCCAGCCCAGGAAA...................................................................................................................2320.505.00------------0.50------------------------------------------------------------------------------------------------------
................................................................................................CCTGAGCTGGCTCCCC............................................................................1660.330.33---------0.33---------------------------------------------------------------------------------------------------------
........................................................GGATCCAGCCCAGGCT....................................................................................................................1660.170.17---------0.17---------------------------------------------------------------------------------------------------------
..............................CTATGGACTGCTTCC...............................................................................................................................................1560.170.17------------------------------------------------0.17------------------------------------------------------------------

Antisense strand
GCCGGCCACTAACGGCCCCATCCCAGGGCCCTATGGACTGCTTCCTCAAGGTGAGGGGATCCAGCCCAGGCTAGGGGGAAGAATCCCTGCCCGTGGCCTGAGCTGGCTCCCCTGCAGCTCCCGTCTCTTCTCGGTCAGCTGGCAGCAGTGACTCCCTGAGCGTCAGCAAGAGCCCTCCCGGGAAGAAC
..................................................((.((((((.(((((.(((((((.(((..((.....)).))).))))))).))))).)))))))).........................................................................
..................................................51....................................................................121.................................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
"background strain: C57BL6/SV129cell type: KR. (cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206942(GSM723283)
other. (brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR014235(GSM319959)
2 dpp total. (testes)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR685339(GSM1079783)
"Small RNAs (15-50 nts in length) from immort. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR525237(SRA056111/SRX170313)
Mus musculus domesticus miRNA sequencing. (Blood)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjTestesWT3()
Testes Data. (testes)		SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR206940(GSM723281)
other. (brain)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR073955(GSM629281)
total RNA. (blood)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206941(GSM723282)
other. (brain)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)
.................................TGGACTGCTTCCTCACGC......................................................................................................................................... 182.000.00------------------------------------------------------2.00------------------------------------------------------------
..........................................................ATCCAGCCCAGGCTAGTAC............................................................................................................... 191.000.00----------------------------------------------------1.00--------------------------------------------------------------
.............................................................................................................................TCTTCTCGGTCAGCT................................................ 1511.001.00----------------------------------------------------------1.00--------------------------------------------------------
........................................................GGATCCAGCCCAGGCTTT.................................................................................................................. 181.000.00---------------------------------------------------------------------------------------------------1.00---------------
..................................................................................................................CAGCTCCCGTCTCTTGC......................................................... 171.000.00------------------------------------------------------------1.00------------------------------------------------------
...............................................................................AGAATCCCTGCCCGTGGGGG......................................................................................... 201.000.00------------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................CCCTGCAGCTCCCGTTTT............................................................. 181.000.00-------------------------------------------------------------------------------------------------------------1.00-----
..................................................GTGAGGGGATCCAGCCCAG....................................................................................................................... 1920.500.50---------0.50---------------------------------------------------------------------------------------------------------
...............................................................................................................CTGCAGCTCCCGTCT.............................................................. 1590.110.11-----------------------------0.11-------------------------------------------------------------------------------------