ID: uc011miq.1_intron_3_0_chrX_15344169_r.5p
GENE: (1)
chrX:15353423-15353672-


(1)
AGO1.ip 		(7)
B-CELL 		(4)
BRAIN 		(16)
BREAST 		(25)
CELL-LINE 		(8)
CERVIX 		(1)
FIBROBLAST 		(7)
HEART 		(4)
HELA 		(1)
KIDNEY 		(9)
LIVER 		(1)
OTHER 		(35)
SKIN 		(1)
XRN.ip

Sense strand
CCGGCTGCAGCCGCGGGAGGTCCGGACACTGGCGGCCATGGAACTCACCGGTGAGTGCGCGTCGCGCCGCCCCTCTCCAGCGCTCTGGGCCGCTTTCGGATGGGGCTGTTCTGCGCGCGTGGGATCGTGGCGGGTGGTGGAGGGGGTGAAACCGACCCGGTTCGAAGCCCGGAAGTTGGGTCGGAGGGTCTCCAGAGTAGGTTGGGGCTGAGGGTGCGTTTAGGGCGGACGCGCTGGGTTCCTTGGCTCA
.........................................................................................((.(((((.......((..(((.((.((((......)))))))))..))))))).))........................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
..............................................ACCGGTGAGTGCGCGTCG..........................................................................................................................................................................................18114.0014.00-5.00-------1.00--2.00-----------------1.001.00---------2.00-------------------------1.00--------------------------------------------1.00----------
..................................................................................................................................CGGGTGGTGGAGGGGCCGC.....................................................................................................1911.000.00-------2.00-2.00-----------------------------1.00---------------1.00--------1.00-----1.00----------------------1.00---------------1.00---1.00---------
..............................................ACCGGTGAGTGCGCGTCGCG........................................................................................................................................................................................20110.0010.006.00--1.00--------2.00--------------------------------------------------------1.00-----------------------------------------------------
...........................ACTGGCGGCCATGGAACTCA...........................................................................................................................................................................................................2017.007.007.00--------------------------------------------------------------------------------------------------------------------------
.....................................ATGGAACTCACCGGTGAG...................................................................................................................................................................................................1816.006.00--------------2.00----------------1.00-1.00--------1.00--------------------------------------------------------1.00-----------------------
.........................ACACTGGCGGCCATGGAACTCACCGG.......................................................................................................................................................................................................2614.004.00----4.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCCG......................................................................................................184.000.00-------1.00---------------------------1.00-----------------------------------1.00------------------------1.00--------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCC.......................................................................................................173.000.00-------1.00--------------------------------------------1.00-------------1.00--------------------------------------------------------
.....................................ATGGAACTCACCGGTGAGTG.................................................................................................................................................................................................2013.003.00------1.00-------------------------------------------------1.00-----1.00------------------------------------------------------------
............................CTGGCGGCCATGGAACTCAC..........................................................................................................................................................................................................2013.003.002.00---------------------------------------------------------------------------------------------1.00----------------------------
................................CGGCCATGGAACTCACCGG.......................................................................................................................................................................................................1913.003.00-3.00-------------------------------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCG........................................................................................................................................................................................................1613.003.00----------1.00---------------1.00-----------------------1.00------------------------------------------------------------------------
.....................................ATGGAACTCACCGGTGAGTGCG...............................................................................................................................................................................................2213.003.00----------2.00---------------------------------1.00------------------------------------------------------------------------------
.........................ACACTGGCGGCCATGGAACTC............................................................................................................................................................................................................2112.002.002.00--------------------------------------------------------------------------------------------------------------------------
.................AGGTCCGGACACTGGCGGCCA....................................................................................................................................................................................................................2112.002.00-----------------------------------------------------------------1.00--------------------------------------------1.00------------
..............................................................................................TTCGGATGGGGCTGTTCTGC........................................................................................................................................2012.002.002.00--------------------------------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGGTAT....................................................................................................................................................................................................2012.001.00--------------------------------------2.00------------------------------------------------------------------------------------
............................................................................................................................................................................AAGTTGGGTCGGAGGGT.............................................................1712.002.00--2.00------------------------------------------------------------------------------------------------------------------------
.................AGGTCCGGACACTGGCGGC......................................................................................................................................................................................................................1912.002.00--------------------------------------------------------------------------1.00--------1.00---------------------------------------
.....................................ATGGAACTCACCGGTGAGTGCGCGTC...........................................................................................................................................................................................2612.002.00----------------------------------------------1.00------------1.00---------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCTGC.....................................................................................................192.000.00---------1.00--------------------------------------------------------------------------------1.00--------------------------------
...........................ACTGGCGGCCATGGAACTCAC..........................................................................................................................................................................................................2112.002.00-------------1.00--------------1.00----------------------------------------------------------------------------------------------
.................................................................................................................CGCGCGTGGGATCGTGGCGGG....................................................................................................................2112.002.00---2.00-----------------------------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGG.......................................................................................................................................................................................................1712.002.00---2.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................TTCGGATGGGGCTGTTCTG.........................................................................................................................................1912.002.00--------------1.00-------1.00----------------------------------------------------------------------------------------------------
.....................................ATGGAACTCACCGGTGAGTGCGCGTCGC.........................................................................................................................................................................................2812.002.00-------------------1.00---1.00---------------------------------------------------------------------------------------------------
......................................................................................GGGCCGCTTTCGGATGGG..................................................................................................................................................1812.002.00-2.00-------------------------------------------------------------------------------------------------------------------------
..................GGTCCGGACACTGGCGGC......................................................................................................................................................................................................................1812.002.00------------------------------1.00--------------------------------------------------------------------------------1.00-----------
................................CGGCCATGGAACTCACCGGTGAG...................................................................................................................................................................................................2312.002.00------1.00------------------------------------1.00-------------------------------------------------------------------------------
......................CGGACACTGGCGGCCATG..................................................................................................................................................................................................................1812.002.00------------------------------------1.00----------1.00---------------------------------------------------------------------------
.............CGGGAGGTCCGGACA..............................................................................................................................................................................................................................1512.002.00----------------------2.00----------------------------------------------------------------------------------------------------
...........................................................................................GCTTTCGGATGGGGCTGTTCTGCG.......................................................................................................................................2412.002.00--2.00------------------------------------------------------------------------------------------------------------------------
................................CGGCCATGGAACTCACCGGTGAGTGCGCGTCG..........................................................................................................................................................................................3212.002.00----2.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................GGCGGGTGGTGGAGGGG.........................................................................................................1741.501.50----------------------------------------------------0.250.250.250.25-----------------------------------------------------------------0.250.25
..................................................................................CTCTGGGCCGCTTTCGTATG....................................................................................................................................................201.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................CGGATGGGGCTGTTCTGCG.......................................................................................................................................1911.001.00---------------------------------------------1.00-----------------------------------------------------------------------------
................................CGGCCATGGAACTCACCGGTGAGTGC................................................................................................................................................................................................2611.001.00-----------------------------------------------1.00---------------------------------------------------------------------------
...............................................................................GCGCTCTGGGCCGCTTTCGG.......................................................................................................................................................2011.001.00---------------1.00-----------------------------------------------------------------------------------------------------------
.......................GGACACTGGCGGCCATGGAA...............................................................................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------1.00------------------------------
...........CGCGGGAGGTCCGGACACTG...........................................................................................................................................................................................................................2011.001.00------------------------------------------------------------------------------------------------------1.00--------------------
...............................GCGGCCATGGAACTCACCGG.......................................................................................................................................................................................................2011.001.00--------1.00------------------------------------------------------------------------------------------------------------------
....................................CATGGAACTCACCGGTGAGTGC................................................................................................................................................................................................2211.001.00---------------------------------------------------------------------------1.00-----------------------------------------------
................GAGGTCCGGACACTGGCGGC......................................................................................................................................................................................................................2011.001.00-1.00-------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGGGTGCGTTTAGGGCGGA.....................1911.001.00---------------------------------------------------------1.00-----------------------------------------------------------------
.....................................................................................TGGGCCGCTTTCGGATGGGG.................................................................................................................................................2011.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
................................CGGCCATGGAACTCACCGGTGA....................................................................................................................................................................................................2211.001.00---------------------------------1.00-----------------------------------------------------------------------------------------
...........................................................................................................................ATCGTGGCGGGTGGTGGAG............................................................................................................1911.001.00------------------------------------------------1.00--------------------------------------------------------------------------
........................................................................................GCCGCTTTCGGATGGGGCTG..............................................................................................................................................2011.001.00------------------------------------------------------------------------------------1.00--------------------------------------
................GAGGTCCGGACACTGTTTG.......................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------------1.00------------------------
......................CGGACACTGGCGGCCATGG.................................................................................................................................................................................................................1911.001.00----------1.00----------------------------------------------------------------------------------------------------------------
.....................CCGGACACTGGCGGCCATGGAAC..............................................................................................................................................................................................................2311.001.00----------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................................................................................................................AGTAGGTTGGGGCTGGGGC....................................191.000.00---------------------------------------------------------------------------------------------------------1.00-----------------
........AGCCGCGGGAGGTCCGGA................................................................................................................................................................................................................................1811.001.00------------------------------------------------------------------------------1.00--------------------------------------------
.................................GGCCATGGAACTCACCGGTGAG...................................................................................................................................................................................................2211.001.00----------------------------------------------------------------------------------------1.00----------------------------------
........................................................GCGCGTCGCGCCGCCGGGC...............................................................................................................................................................................191.000.00---------------1.00-----------------------------------------------------------------------------------------------------------
...............................GCGGCCATGGAACTCACCGGT......................................................................................................................................................................................................2111.001.00----------------------------------------------------------------------------------------------------1.00----------------------
.............................................................................................TTTCGGATGGGGCTGGTC...........................................................................................................................................181.000.00---1.00-----------------------------------------------------------------------------------------------------------------------
...............................................................................................................................TGGCGGGTGGTGGAGGGGC........................................................................................................1921.000.50----------------------------------------------------------------------------------1.00----------------------------------------
................................CGGCCATGGAACTCACCA........................................................................................................................................................................................................181.000.00----1.00----------------------------------------------------------------------------------------------------------------------
...........CGCGGGAGGTCCGGACACT............................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------1.00-------------------------------------------------------------
..............GGGAGGTCCGGACACTGGC.........................................................................................................................................................................................................................1911.001.00-----------------------------1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................TAGGGCGGACGCGCTGGGTCCCC.......231.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGGTGAG...................................................................................................................................................................................................2111.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
..............................................ACCGGTGAGTGCGCGTCGCGCC......................................................................................................................................................................................2211.001.00------------------------------------------------------------------------------------------------------------------1.00--------
.............................................................................................TTTCGGATGGGGCTGGTT...........................................................................................................................................181.000.00---1.00-----------------------------------------------------------------------------------------------------------------------
...................GTCCGGACACTGGCGGCCATGGGA...............................................................................................................................................................................................................241.000.00--------------------------------------------1.00------------------------------------------------------------------------------
..........................CACTGGCGGCCATGGAACTCAA..........................................................................................................................................................................................................221.000.00--------------------------1.00------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGGTG.....................................................................................................................................................................................................1911.001.00---------------------1.00-----------------------------------------------------------------------------------------------------
..............GGGAGGTCCGGACACTGGCGGCCAT...................................................................................................................................................................................................................2511.001.00------------------------------------------------------------------------1.00--------------------------------------------------
.............................................................................................TTTCGGATGGGGCTGATT...........................................................................................................................................181.000.00-1.00-------------------------------------------------------------------------------------------------------------------------
.........................ACACTGGCGGCCATGGAAC..............................................................................................................................................................................................................1911.001.00--------1.00------------------------------------------------------------------------------------------------------------------
......................CGGACACTGGCGGCCATGGAACTCAC..........................................................................................................................................................................................................2611.001.00--------------------------------1.00------------------------------------------------------------------------------------------
..............GGGAGGTCCGGACACTGG..........................................................................................................................................................................................................................1811.001.00----------------------------------1.00----------------------------------------------------------------------------------------
.............................TGGCGGCCATGGAACTCACCGGTGAGTGCGCG.............................................................................................................................................................................................3211.001.00------------------------1.00--------------------------------------------------------------------------------------------------
.........................................................................................CCGCTTTCGGATGGGGCTGT.............................................................................................................................................2011.001.00----------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................CGCGTGGGATCGTGGCGGG....................................................................................................................1911.001.00-------------------------------------1.00-------------------------------------------------------------------------------------
.............................................................................................TTTCGGATGGGGCTGTTCTG.........................................................................................................................................2011.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
......................................TGGAACTCACCGGTGAGTGC................................................................................................................................................................................................2011.001.00---------------------------------------------------------------1.00-----------------------------------------------------------
...........................ACTGGCGGCCATGGAACTCACC.........................................................................................................................................................................................................2211.001.00----------------------------1.00----------------------------------------------------------------------------------------------
..........................................ACTCACCGGTGAGTGCGCGTCG..........................................................................................................................................................................................2211.001.00--------------------------------------------------------------------------------------------------------1.00------------------
..................................GCCATGGAACTCACCGGTGAGTGC................................................................................................................................................................................................2411.001.00-----------------------------------1.00---------------------------------------------------------------------------------------
...............................GCGGCCATGGAACTCAC..........................................................................................................................................................................................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGGTGAGTGCG...............................................................................................................................................................................................2511.001.00---------------------1.00-----------------------------------------------------------------------------------------------------
...............................GCGGCCATGGAACTCACCGGTG.....................................................................................................................................................................................................2211.001.00-------------------------------------------------------------------------------------------1.00-------------------------------
..............GGGAGGTCCGGACACTGGCGGCCCG...................................................................................................................................................................................................................251.000.00---------------------------1.00-----------------------------------------------------------------------------------------------
.............................................................................................TTTCGGATGGGGCTGTTC...........................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
......GCAGCCGCGGGAGGTCCGGACAC.............................................................................................................................................................................................................................2311.001.00-------------------------1.00-------------------------------------------------------------------------------------------------
...........................................................................................GCTTTCGGATGGGGCTGTTCTGC........................................................................................................................................2311.001.001.00--------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCTGT.....................................................................................................191.000.00----------------------------------------------------------1.00----------------------------------------------------------------
............................CTGGCGGCCATGGAACTCACCGGTGAGTGC................................................................................................................................................................................................3011.001.00---------------------------------------1.00-----------------------------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCAA......................................................................................................181.000.00-------------------------------------------1.00-------------------------------------------------------------------------------
........................................GAACTCACCGGTGAGTGC................................................................................................................................................................................................1811.001.00-1.00-------------------------------------------------------------------------------------------------------------------------
...........................ACTGGCGGCCATGGAACTCACCGT.......................................................................................................................................................................................................241.000.00-----------------------------------------------------------------------------------------------------1.00---------------------
.........................................................................................CCGCTTTCGGATGGGGCTG..............................................................................................................................................1911.001.00--------------------------------------------------------------------------------1.00------------------------------------------
...........................................CTCACCGGTGAGTGCGCGTCG..........................................................................................................................................................................................2111.001.00------------------------------------------------------------------------------------------------------------1.00--------------
................................CGGCCATGGAACTCACCGGTG.....................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------------------1.00---------------------------
............................................................................CCAGCGCTCTGGGCCGCTTTCGGAT.....................................................................................................................................................2511.001.00-------------------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CTCCAGAGTAGGTTGTGTC..........................................191.000.00------------------------1.00--------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGTCGC.....................................................................................................191.000.00---------------------------------------------------------------------------------1.00-----------------------------------------
..................................GCCATGGAACTCACCGGT......................................................................................................................................................................................................1811.001.00---------------------------------------------------------------------------------------1.00-----------------------------------
.....................................ATGGAACTCACCGGTGCG...................................................................................................................................................................................................181.000.00------------------------------------------------1.00--------------------------------------------------------------------------
.................................................................................GCTCTGGGCCGCTTTCGGATGG...................................................................................................................................................2211.001.00-------------------1.00-------------------------------------------------------------------------------------------------------
...........CGCGGGAGGTCCGGACACTGGCGGCCA....................................................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------------------------------------1.00---------------
...................................CCATGGAACTCACCGGTGAGTGCGC..............................................................................................................................................................................................2511.001.00------1.00--------------------------------------------------------------------------------------------------------------------
......GCAGCCGCGGGAGGTCCGGACACT............................................................................................................................................................................................................................2411.001.00------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGTAGGTTGGGGCTGAGGGCGCG................................231.000.00-----------------1.00---------------------------------------------------------------------------------------------------------
..........................................................................CTCCAGCGCTCTGGGC................................................................................................................................................................1611.001.00--1.00------------------------------------------------------------------------------------------------------------------------
.....................................ATGGAACTCACCGGTGAGTGCGC..............................................................................................................................................................................................2311.001.00------------------------------------------------------1.00--------------------------------------------------------------------
.....................CCGGACACTGGCGGCCATGGAA...............................................................................................................................................................................................................2211.001.00------------------------------------1.00--------------------------------------------------------------------------------------
..............GGGAGGTCCGGACACTGGCGGCCCT...................................................................................................................................................................................................................251.000.00---------------------------1.00-----------------------------------------------------------------------------------------------
..................................GCCATGGAACTCACCGGTGAGTG.................................................................................................................................................................................................2311.001.00------------------1.00--------------------------------------------------------------------------------------------------------
......................................................................................GGGCCGCTTTCGGATGGGG.................................................................................................................................................1911.001.00---1.00-----------------------------------------------------------------------------------------------------------------------
...........................ACTGGCGGCCATGGAACTCACCGGTGAGTG.................................................................................................................................................................................................3011.001.00----------------------------------------------------------------------------------------------------------1.00----------------
............................CTGGCGGCCATGGAACTCACCG........................................................................................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------
...................GTCCGGACACTGGCGGCCAT...................................................................................................................................................................................................................2011.001.00------------------------1.00--------------------------------------------------------------------------------------------------
...........................................................................TCCAGCGCTCTGGGCCGCTT...........................................................................................................................................................2011.001.00----------------1.00----------------------------------------------------------------------------------------------------------
.........................ACACTGGCGGCCATGGAACTCA...........................................................................................................................................................................................................2211.001.001.00--------------------------------------------------------------------------------------------------------------------------
...................................CCATGGAACTCACCGGTG.....................................................................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------------
................GAGGTCCGGACACTGGCG........................................................................................................................................................................................................................1811.001.00----------------------------------------1.00----------------------------------------------------------------------------------
..........................CACTGGCGGCCATGGAACTCACCGGTGA....................................................................................................................................................................................................2811.001.00--------------------------------------------------------------------1.00------------------------------------------------------
...........................ACTGGCGGCCATGGAACTCACCGGG......................................................................................................................................................................................................251.000.00---------------------------------------------1.00-----------------------------------------------------------------------------
.....................................ATGGAACTCACCGGTGAGTGCGCG.............................................................................................................................................................................................2411.001.00----1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCTG......................................................................................................181.000.00-------------------------------------------------------------------------------------------------1.00-------------------------
..................................................................................................................................CGGGTGGTGGAGGGGCT.......................................................................................................171.000.00-------------------------------------------------------------------------------------------------------1.00-------------------
..................................................................................................................................CGGGTGGTGGAGGGGCCAC.....................................................................................................191.000.00-----------------------------------------------------1.00---------------------------------------------------------------------
...........................................................................................................................................................................................................................TTAGGGCGGACGCGCTGGGTTCCTTGGCTC.3011.001.00-----------------1.00---------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTTGGGGCTGAGGGTG..................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------------
........................................................................................GCCGCTTTCGGATGGGGC................................................................................................................................................1811.001.00--1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................CGGATGGGGCTGTTCTGC........................................................................................................................................1821.001.001.00--------------------------------------------------------------------------------------------------------------------------
................................CGGCCATGGAACTCACCG........................................................................................................................................................................................................1811.001.00----1.00----------------------------------------------------------------------------------------------------------------------
.............................TGGCGGCCATGGAACTCACCG........................................................................................................................................................................................................2111.001.00---------------------1.00-----------------------------------------------------------------------------------------------------
.........................ACACTGGCGGCCATGGA................................................................................................................................................................................................................1711.001.00------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................AAGTTGGGTCGGAGGGTCCCC.........................................................211.000.00----------------1.00----------------------------------------------------------------------------------------------------------
.............................................................................CAGCGCTCTGGGCCGCTTTCGGATGGGG.................................................................................................................................................2811.001.00--1.00------------------------------------------------------------------------------------------------------------------------
.............................TGGCGGCCATGGAACTCA...........................................................................................................................................................................................................1821.001.00--0.50-----------------------------------------------0.50------------------------------------------------------------------------
..........................CACTGGCGGCCATGGA................................................................................................................................................................................................................1611.001.00------1.00--------------------------------------------------------------------------------------------------------------------
...........................ACTGGCGGCCATGGAACTCACCGGGG.....................................................................................................................................................................................................261.000.00-------------------------------------------------------------------------1.00-------------------------------------------------
...........................ACTGGCGGCCATGGAACTC............................................................................................................................................................................................................1911.001.00------------------------------------------------------------1.00--------------------------------------------------------------
....................................CATGGAACTCACCGGTGAGTGCGC..............................................................................................................................................................................................2411.001.00--------1.00------------------------------------------------------------------------------------------------------------------
...................................CCATGGAACTCACCGG.......................................................................................................................................................................................................1611.001.00------------------------------------------1.00--------------------------------------------------------------------------------
........................................................................................................GCTGTTCTGCGCGCGTGGGATCG...........................................................................................................................2311.001.00-------------------------------------1.00-------------------------------------------------------------------------------------
.............................................CACCGGTGAGTGCGCGTCG..........................................................................................................................................................................................1911.001.00--------1.00------------------------------------------------------------------------------------------------------------------
..............................................................................................TTCGGATGGGGCTGTTCTGCG.......................................................................................................................................2111.001.00-------------------------------------------------------------------------------------1.00-------------------------------------
......................CGGACACTGGCGGCCATGGAACTCA...........................................................................................................................................................................................................2511.001.00---------------------------------------------------1.00-----------------------------------------------------------------------
..............................................ACCGGTGAGTGCGCGTC...........................................................................................................................................................................................1711.001.00--------------------------------1.00------------------------------------------------------------------------------------------
.....................CCGGACACTGGCGGCCATGGAACTCACCGGTGAGTG.................................................................................................................................................................................................3611.001.00------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................GGCGGGTGGTGGAGGGGCTGC.....................................................................................................2140.751.50--------------------------------------------------------0.25--------------------------------------------------------------0.250.25--
................................................................................................................................GGCGGGTGGTGGAGGGGCCGC.....................................................................................................2140.751.50---------------------------------------------------0.25----------------------------------------------------------------0.250.25-----
....................................................................................................TGGGGCTGTTCTGCG.......................................................................................................................................1520.500.50-------------------------------------------------------------------------------------------------------------------0.50-------
......................................TGGAACTCACCGGTG.....................................................................................................................................................................................................1520.500.50-------------------------------------------------0.50-------------------------------------------------------------------------
...............................................................................................................................TGGCGGGTGGTGGAGGGG.........................................................................................................1820.500.50--------------------------0.50------------------------------------------------------------------------------------------------
...............................GCGGCCATGGAACTCA...........................................................................................................................................................................................................1620.500.50-------------------------0.50-------------------------------------------------------------------------------------------------
................................................................................................CGGATGGGGCTGTTC...........................................................................................................................................1520.500.50--0.50------------------------------------------------------------------------------------------------------------------------
................................................................................................................................GGCGGGTGGTGGAGGG..........................................................................................................1650.400.40--------0.20------------------------------------------0.20-----------------------------------------------------------------------
................................................................................................................................GGCGGGTGGTGGAGGGGT........................................................................................................1840.251.50-------0.25-------------------------------------------------------------------------------------------------------------------
.................................................................................................................................GCGGGTGGTGGAGGGG.........................................................................................................1670.140.14--------------------------------------------------------------------------------------------------------------------0.14------

Antisense strand
CCGGCTGCAGCCGCGGGAGGTCCGGACACTGGCGGCCATGGAACTCACCGGTGAGTGCGCGTCGCGCCGCCCCTCTCCAGCGCTCTGGGCCGCTTTCGGATGGGGCTGTTCTGCGCGCGTGGGATCGTGGCGGGTGGTGGAGGGGGTGAAACCGACCCGGTTCGAAGCCCGGAAGTTGGGTCGGAGGGTCTCCAGAGTAGGTTGGGGCTGAGGGTGCGTTTAGGGCGGACGCGCTGGGTTCCTTGGCTCA
.........................................................................................((.(((((.......((..(((.((.((((......)))))))))..))))))).))........................................................................................................
.........................................................................................90.............................................................153...............................................................................................
SizePerfect hitTotal NormPerfect NormSRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)		SRR207110(GSM721072)
Nuclear RNA. (cell line)		DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)		SRR207116(GSM721078)
Nuclear RNA. (cell line)		DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)		SRR189784SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)		SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)		SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)		DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR189782SRR033728(GSM497073)
MALT (MALT413). (B cell)		SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)		DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)		TAX577740(Rovira)
total RNA. (breast)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		TAX577579(Rovira)
total RNA. (breast)		SRR038860(GSM458543)
MM426. (cell line)		SRR189786SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)		SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)		SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)		TAX577743(Rovira)
total RNA. (breast)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)		SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)		GSM1105748AGO1(GSM1105748)
small RNA sequencing data. (ago1 hela)		GSM450607(GSM450607)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)		SRR040016(GSM532901)
G645N. (cervix)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)		GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)		SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)		SRR015447(SRR015447)
nuclear small RNAs. (breast)		SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)		SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR039635(GSM518472)
THP1_nuc_sRNAs. (cell line)		SRR029126(GSM416755)
143B. (cell line)		SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)		TAX577589(Rovira)
total RNA. (breast)		SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)		SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)		TAX577745(Rovira)
total RNA. (breast)		SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)		SRR040015(GSM532900)
G623T. (cervix)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)		SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)		SRR553574(SRX182780)
source: Heart. (Heart)		SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)		SRR444061(SRX128909)
Sample 19cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)		GSM359173(GSM359173)
hela_10_1. (hela)		SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)		SRR191614(GSM715724)
92genomic small RNA (size selected RNA from t. (breast)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)		SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)		SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)		SRR040030(GSM532915)
G013N. (cervix)		TAX577580(Rovira)
total RNA. (breast)		SRR191552(GSM715662)
42genomic small RNA (size selected RNA from t. (breast)		SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)		SRR040010(GSM532895)
G529N. (cervix)		SRR039615(GSM531978)
Severe Chronic Hepatitis B Liver Tissue. (liver)		SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)		SRR553575(SRX182781)
source: Kidney. (Kidney)		SRR207111(GSM721073)
Whole cell RNA. (cell line)		SRR189787GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR040028(GSM532913)
G026N. (cervix)		GSM532880(GSM532880)
G659T. (cervix)		SRR060985(GSM569189)
Human naive B cell [09-001]. (cell line)		SRR330910(SRX091748)
tissue: normal skindisease state: normal. (skin)		SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)		SRR343333(GSM796036)
KSHV (HHV8). (cell line)		SRR037876(GSM522374)
fibroblasts_cell_culture. (fibroblast)		SRR037937(GSM510475)
293cand2. (cell line)		SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)		SRR189785SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR033726(GSM497071)
Mututated CLL (CLLM633). (B cell)		SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)		SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)		TAX577739(Rovira)
total RNA. (breast)		TAX577590(Rovira)
total RNA. (breast)		SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)		SRR040006(GSM532891)
G601N. (cervix)		SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)		SRR040038(GSM532923)
G531N. (cervix)		DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)		SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)		SRR038857(GSM458540)
D20. (cell line)		SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR060168(GSM565978)
5-8F_nucleus. (cell line)		GSM450602(GSM450602)
miRNA sequencing raw reads from post-mortem s. (brain)		TAX577744(Rovira)
total RNA. (breast)		SRR060986(GSM569190)
Human memory B cell [09-001]. (cell line)		TAX577453(Rovira)
total RNA. (breast)		SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		SRR033729(GSM497074)
splenic MZL (Splenic414). (B cell)		SRR191550(GSM715660)
27genomic small RNA (size selected RNA from t. (breast)		SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)		SRR191486(GSM715596)
125genomic small RNA (size selected RNA from . (breast)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)		SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)		SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)		SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)		SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)		SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)		SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
.......................................................................................................................................GGTGGAGGGGGTGAACAGC................................................................................................ 194.000.00-----1.00-----1.00--------2.00------------------------------------------------------------------------------------------------------
...................................................................................................................................GGGTGGTGGAGGGGGTGAAAGC................................................................................................. 223.000.00-----1.00-----1.00--------1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................TGGTGGAGGGGGTGAAAGC................................................................................................. 192.000.00-----1.00----------------------------------------------------------------------1.00----------------------------------------------
........................................................GCGCGTCGCGCCGCCCCCG............................................................................................................................................................................... 192.000.00-------------2.00-------------------------------------------------------------------------------------------------------------
.............................TGGCGGCCATGGAACTTC........................................................................................................................................................................................................... 182.000.00-----------------------2.00---------------------------------------------------------------------------------------------------
.......................................................................................................................................GGTGGAGGGGGTGAACAG................................................................................................. 182.000.00-----1.00-----1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................CCGCTTTCGGATGGGGCTTA............................................................................................................................................. 201.000.00--------------------------------------------------------------------------------------1.00------------------------------------
...................................................................................................................................GGGTGGTGGAGGGGGTGAACG.................................................................................................. 211.000.00-----1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................GATGGGGCTGTTCTGCTCAC.................................................................................................................................... 201.000.00----------------1.00----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GCTGGGTTCCTTGGCCGCG 191.000.00----------------------------------1.00----------------------------------------------------------------------------------------
.......................................................................................................................................GGTGGAGGGGGTGAACAA................................................................................................. 181.000.00-----------------------------------------------------------------------------------------1.00---------------------------------
.........................................................CGCGTCGCGCCGCCCTCCA.............................................................................................................................................................................. 191.000.00-------------------------------------------------------------------------------1.00-------------------------------------------
.........................................................................................CCGCTTTCGGATGGGGCTGTT............................................................................................................................................ 2111.000.00-----------------------------------------------------------------------------1.00---------------------------------------------
...................................................................................................................................GGGTGGTGGAGGGGGTGAAAGA................................................................................................. 221.000.00-----------1.00---------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................CCGACCCGGTTCGAACGCG................................................................................ 191.000.00-------------------------------------------------1.00-------------------------------------------------------------------------
.CCGCGGCTGCAGCCG.......................................................................................................................................................................................................................................... 1570.140.14---------------------------------------------------------0.14-----------------------------------------------------------------