ID: uc011lmz.1_intron_6_0_chr9_19076703_r.5p
GENE: (3)
chr9:19077974-19078223-


(2)
B-CELL 		(3)
BRAIN 		(1)
BREAST 		(9)
CELL-LINE 		(1)
HEART 		(2)
LIVER 		(1)
OTHER 		(1)
SKIN

Sense strand
AAGAATTTCTTGGTTTGTCTCCTTTCAGTCTAATTAAAGGTTGGACTCCAGTAAGTAATGTTGACTTGCCCCTGCCCTCCCCGCCACCCACCTTTTTTTTTTTTTTTGAGACAGTGTCTTGCTCTGTTGCCCAGGCTGGAGTAGAGTGGCACGATCATAGCTGGCTGGAGTACAGTGGCACGATCATAGCTGGCTGGAGTACGGTGGCATGATCATAGCTTGTTGTAACCTTGAACTTCCGGGCTCAAGC
..................................................................................(((((.(((..((((..........))))..)))..(((((((...((....)).))))))).)))))....................................................................................................
..................................................................................83...........................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
.......................................................................................CCACCTTTTTTTTTTTTTATAG.............................................................................................................................................2263.000.0032.0013.0016.00-2.00----------------
.......................................................................................CCACCTTTTTTTTTTTATAG...............................................................................................................................................2062.000.0030.0013.0013.00-6.00----------------
.......................................................................................CCACCTTTTTTTTTTATAG................................................................................................................................................1939.000.0018.005.008.00-8.00----------------
.......................................................................................CCACCTTTTTTTTTTTTATAT..............................................................................................................................................217.000.004.003.00-------------------
.......................................................................................CCACCTTTTTTTTTTTTTATAT.............................................................................................................................................227.000.002.002.00--3.00----------------
.......................................................................................CCACCTTTTTTTTTTTTTATGG.............................................................................................................................................223.000.001.00-1.00-1.00----------------
.......................................................................................CCACCTTTTTTTTTTTTATTG..............................................................................................................................................212.000.002.00--------------------
.......................................................................................CCACCTTTTTTTTTTTTTATTG.............................................................................................................................................222.000.00-1.00--1.00----------------
.......................................................................................CCACCTTTTTTTTTTTTACAG..............................................................................................................................................212.000.00--2.00------------------
........................................................................................................................................................................AGTACAGTGGCACGATCATAGCTCCCC.......................................................271.000.00---1.00-----------------
..............................................................................................................................TTGCCCAGGCTGGAGTAGAGTGGCTCG.................................................................................................271.000.00-----1.00---------------
.......................................................................................CCACCTTTTTTTTTTTTTTTGTT............................................................................................................................................231.000.00-1.00-------------------
...................................................................................................TTTTTTTTGAGACAGTGACCC..................................................................................................................................211.000.00-----1.00---------------
.......................................................................................CCACCTTTTTTTTTTTTTTTCGG............................................................................................................................................231.000.001.00--------------------
......................................................................................................................................GCTGGAGTAGAGTGGCACGATA..............................................................................................221.000.00------1.00--------------
.......................................................................................CCACCTTTTTTTTTTATAT................................................................................................................................................191.000.00----1.00----------------
.......................................................................................CCACCTTTTTTTTTTACAG................................................................................................................................................191.000.00----1.00----------------
........................................................................................CACCTTTTTTTTTTTTTTTGAGC...........................................................................................................................................231.000.00---1.00-----------------
.........................................................................................ACCTTTTTTTTTTTTTTTGTTAG..........................................................................................................................................231.000.00-----1.00---------------
...................................................................................................................................CAGGCTGGAGTAGAGTGGGACA.................................................................................................221.000.00------1.00--------------
.........................................................................................ACCTTTTTTTTTTTTTTTGAGACAGC.......................................................................................................................................261.000.00---1.00-----------------
..................................................................................................................TGTCTTGCTCTGTTGCCCAGGCTGGAGCGCC.........................................................................................................311.000.00---1.00-----------------
................................................................................................................................................................CTGGCTGGAGTACAGTGGGATG....................................................................221.000.00-----------1.00---------
.........................................................................................ACCTTTTTTTTTTTTTTTGTGG...........................................................................................................................................221.000.00-1.00-------------------
....................................................................................CACCCACCTTTTTTTTTTTCTG................................................................................................................................................221.000.00----1.00----------------
..................................................................................................................TGTCTTGCTCTGTTGCCCAGGCGGAG..............................................................................................................261.000.00-----1.00---------------
................................................................................................................AGTGTCTTGCTCTGTTGCCCAGGCTGGGTG............................................................................................................301.000.00---1.00-----------------
.........................................................................................ACCTTTTTTTTTTTTTTTGTTTT..........................................................................................................................................231.000.00-----1.00---------------
.......................................................................................CCACCTTTTTTTTTTTTATAA..............................................................................................................................................211.000.001.00--------------------
.....................................................................................................................................................................TGGAGTACAGTGGCACGATCATAGCC...........................................................261.000.00---1.00-----------------
.......................................................................................CCACCTTTTTTTTTTTACG................................................................................................................................................191.000.00-1.00-------------------
.........................................................................................ACCTTTTTTTTTTTTTTTGAGTG..........................................................................................................................................231.000.00---1.00-----------------
............................................................................................................................TGTTGCCCAGGCTGGAGTAGCGG.......................................................................................................231.000.00---1.00-----------------
.........................................................................................ACCTTTTTTTTTTTTTTTGAGCTAG........................................................................................................................................251.000.00--1.00------------------
.....................................................................................ACCCACCTTTTTTTTTTTTTTTCGAG...........................................................................................................................................261.000.00---1.00-----------------
.............................................................................................................................................................TAGCTGGCTGGAGTACAGTGGCACG....................................................................2511.001.00---1.00-----------------
.............................................................................................................................................................................................CTGGCTGGAGTACGGTGGTATG.......................................221.000.00----------1.00----------
.......................................................................................CCACCTTTTTTTTTTTTTTTCCG............................................................................................................................................231.000.00-1.00-------------------
....................................................................................CACCCACCTTTTTTTTCTCT..................................................................................................................................................201.000.00--1.00------------------
....................................................................................................................................................................CTGGAGTACAGTGGCACGATCGCG..............................................................241.000.00--------------1.00------
..............................................................................................................................TTGCCCAGGCTGGAGTAGAGCGAC....................................................................................................241.000.00-----1.00---------------
.........................................................................................ACCTTTTTTTTTTTTTTTGCCTG..........................................................................................................................................231.000.00--1.00------------------
..........................................................................................................................................GAGTAGAGTGGCACGAAGC.............................................................................................191.000.00--------1.00------------
...................................................................................CCACCCACCTTTTTTTTTTTG..................................................................................................................................................211.000.00-1.00-------------------
.......................................................................................CCACCTTTTTTTTTTTAGAG...............................................................................................................................................201.000.00-1.00-------------------
.......................................................................................CCACCTTTTTTTTTTATAA................................................................................................................................................191.000.00-1.00-------------------
................................ATTAAAGGTTGGACTCCA........................................................................................................................................................................................................1821.001.00-------0.50---------0.50---
.........................................................................................................................................................................................................................GCTTGTTGTAACCTTTTGG..............191.000.00-------------1.00-------
.........................................................................................ACCTTTTTTTTTTTTTTTGAGGGGG........................................................................................................................................251.000.00---1.00-----------------
........................................................................................CACCTTTTTTTTTTTTTTTGAAGGG.........................................................................................................................................251.000.001.00--------------------
.................................TTAAAGGTTGGACTCCA........................................................................................................................................................................................................1720.500.50------------------0.50--
.....................................................................................................................................GGCTGGAGTAGAGTGGCACGATCAT............................................................................................2540.250.25-------------------0.25-
..................................................................................GCCACCCACCTTTTTT........................................................................................................................................................1650.200.20--------------------0.20
.........................................................................................ACCTTTTTTTTTTTTTTTGAGACAGTG......................................................................................................................................2750.200.20-----0.20---------------

Antisense strand
AAGAATTTCTTGGTTTGTCTCCTTTCAGTCTAATTAAAGGTTGGACTCCAGTAAGTAATGTTGACTTGCCCCTGCCCTCCCCGCCACCCACCTTTTTTTTTTTTTTTGAGACAGTGTCTTGCTCTGTTGCCCAGGCTGGAGTAGAGTGGCACGATCATAGCTGGCTGGAGTACAGTGGCACGATCATAGCTGGCTGGAGTACGGTGGCATGATCATAGCTTGTTGTAACCTTGAACTTCCGGGCTCAAGC
..................................................................................(((((.(((..((((..........))))..)))..(((((((...((....)).))))))).)))))....................................................................................................
..................................................................................83...........................................................................160........................................................................................
SizePerfect hitTotal NormPerfect NormSRR189775(GSM714635)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189776(GSM714636)
cell line: HEK293clip variant: CLIPenzymatic . (cell line)		SRR189778(GSM714638)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189780(GSM714640)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)		GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR107297(GSM677704)
18-30nt fraction of small RNA. (cell line)		SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)		GSM450604(GSM450604)
miRNA sequencing raw reads from post-mortem s. (brain)		GSM450601(GSM450601)
miRNA sequencing raw reads from post-mortem s. (brain)		SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)		SRR189782TAX577744(Rovira)
total RNA. (breast)		SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)		SRR189781(GSM714641)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)		SRR033722(GSM497067)
KMS12 cell line (KMS12). (B cell)		DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)		SRR033730(GSM497075)
Lymphoblastic (ALL411). (B cell)		SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGATGGGC.............................................................. 264.000.00---3.00-1.00---------------
................................................................................................................................................................CTGGCTGGAGTACAGTGGCACGATGGGC.............................................................. 282.000.00---2.00-----------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGAGGGC............................................................... 252.000.00---2.00-----------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCAGAGC.................................................................. 222.000.00-----2.00---------------
...................................................................................................................................AGCTATGATCGTGCCACTCTACTCCAGCCTG........................................................................................ 3111.001.00-----1.00---------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGATGAG............................................................... 251.000.00-----1.00---------------
........................................................................................................................GCTCTGTTGCCCAGGCTGGAGTACG......................................................................................................... 251.000.00---1.00-----------------
...................................................................................................................................CAGGCTGGAGTAGAGTGGCACGATCATTG.......................................................................................... 291.000.00-----1.00---------------
.......................................................................................................................................................................GAGTACAGTGGCACGATCATAGTG........................................................... 241.000.00------------1.00--------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGATGAGG.............................................................. 261.000.00---1.00-----------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGATGGCG.............................................................. 261.000.00---1.00-----------------
...................................................................................................................................................................GCTGGAGTACAGTGGCACGATGGGG.............................................................. 251.000.00---1.00-----------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGATGACG.............................................................. 261.000.00-----1.00---------------
.....................................................................................................................................GGCTGGAGTAGAGTGGCACGATCGG............................................................................................ 251.000.00---1.00-----------------
...............................................................................................................................................................................................GGCTGGAGTACGGTGGCACGGC..................................... 221.000.00---1.00-----------------
........................................................................................................................................................................AGTACAGTGGCACGATCATAGCTGTAG....................................................... 271.000.00----------------1.00----
.............................................................................................................................................................................................CTGGCTGGAGTACGGTGGCAGGC...................................... 231.000.00-----1.00---------------
..................................................................................................................................................................GGCTGGAGTACAGTGGCACGACGGC............................................................... 251.000.00---1.00-----------------
...........................................................................................................GAGACAGTGTCTTGCTCTGTTGCCCAG.................................................................................................................... 271.000.00-------1.00-------------
.......................................................................................................................................................................GAGTACAGTGGCACGATCATATG............................................................ 231.000.00---------1.00-----------
.................................................................................................................................................................TGGCTGGAGTACAGTGGCACGAAGC................................................................ 251.000.00---1.00-----------------
....................................................................................CACCCACCTTTTTTTTTTTTTACT.............................................................................................................................................. 241.000.00---------------1.00-----
................................................................................................................................................................CTGGCTGGAGTACAGTGGCACGATCAAGC............................................................. 291.000.00-----1.00---------------
....................................................................................................................................AGGCTGGAGTAGAGTGGCACGCGG.............................................................................................. 241.000.00-----1.00---------------
...............................................................................................................................................................................................GGCTGGAGTACGGTGGCAGAGC..................................... 221.000.00-----1.00---------------
................................................................GGGGAGGGCAGGGGCAAG........................................................................................................................................................................ 1830.330.33-----0.33---------------