| (1) BREAST | (11) CELL-LINE | (1) HELA | (1) LIVER | (1) OTHER | (1) SKIN |
| TTTGCCATATTGAATCAGATGTCCAGAACATTAGATTAGCTCCAGAAACAGAATAGGACAATTCCAGTAACTTTGACTATTCTTGGTAAAAGTCAAAAGGAATTGTAAGAGCTACTATCTTAGCCTAATATGCTGAGTTTATTTTTGGTATATTATTAAAAGGGGGAAATTAAAAATTACATTTTTTACTCACTTCATAGATCGTCTTATTAGGCATAGAGCCTGTGCTTTAAGAGATACTGCCTATGCC .................................................................................................(((((.(((((..((((......)))).((((((((..((......))..)))))))).....................))))).)))))............................................................... ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR029128(GSM416757) H520. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR189784 | SRR189782 | SRR390723(GSM850202) total small RNA. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM359180(GSM359180) hela_phil_smrna_cyto. (hela) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | SRR343335 | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................AGGAATTGTAAGAGCTGCA...................................................................................................................................... | 19 | 27.00 | 0.00 | - | 17.00 | 4.00 | 4.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCAATC...................................................................................................................................... | 19 | 25.00 | 0.00 | 25.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCTGCAA..................................................................................................................................... | 20 | 9.00 | 0.00 | - | 9.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................AAGGAATTGTAAGAGCTGCA...................................................................................................................................... | 20 | 8.00 | 0.00 | - | - | 7.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCATC....................................................................................................................................... | 18 | 5.00 | 0.00 | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................GGAATTGTAAGAGCTGCA...................................................................................................................................... | 18 | 4.00 | 0.00 | - | - | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCTGC....................................................................................................................................... | 18 | 2.00 | 0.00 | - | - | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCAGGT...................................................................................................................................... | 19 | 2.00 | 0.00 | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................................................ACATTTTTTACTCACTCTTG.................................................... | 20 | 2.00 | 0.00 | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......TATTGAATCAGATGTCCAGA............................................................................................................................................................................................................................... | 20 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................................................TTAAGAGATACTGCCTATGCC | 21 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - |
| ................................................................................................AAGGAATTGTAAGAGCTGA....................................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| .................................................................................................AGGAATTGTAAGAGCAGG....................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................AAGGAATTGTAAGAGCTACAATC................................................................................................................................... | 23 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................AGGAATTGTAAGAGCAGGA...................................................................................................................................... | 19 | 1.00 | 0.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .................................................................................................................................................................................................................TTAGGCATAGAGCCTGTGCTTTAAGA............... | 26 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - |
| ..................................................................................................GGAATTGTAAGAGCTGCG...................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| TTTGCCATATTGAATCAGATGTCCAGAACATTAGATTAGCTCCAGAAACAGAATAGGACAATTCCAGTAACTTTGACTATTCTTGGTAAAAGTCAAAAGGAATTGTAAGAGCTACTATCTTAGCCTAATATGCTGAGTTTATTTTTGGTATATTATTAAAAGGGGGAAATTAAAAATTACATTTTTTACTCACTTCATAGATCGTCTTATTAGGCATAGAGCCTGTGCTTTAAGAGATACTGCCTATGCC .................................................................................................(((((.(((((..((((......)))).((((((((..((......))..)))))))).....................))))).)))))............................................................... ............................................................................................93.........................................................................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | SRR314796(SRX084354) "Total RNA, fractionated (15-30nt)". (cell line) | SRR387909(GSM843861) specific-host: Homo sapienshost cell line: Su. (cell line) | SRR191607(GSM715717) 192genomic small RNA (size selected RNA from . (breast) | SRR029128(GSM416757) H520. (cell line) | SRR039190(GSM494809) PBMCs were isolated by ficoll gradient from t. (blood) | SRR189784 | SRR189782 | SRR390723(GSM850202) total small RNA. (cell line) | SRR029130(GSM416759) DLD2. (cell line) | SRR039623(GSM531986) HCV(+) HCC Tissue Sample. (liver) | SRR189777(GSM714637) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) | SRR343334 | SRR207110(GSM721072) Nuclear RNA. (cell line) | SRR189775(GSM714635) cell line: HEK293clip variant: CLIPenzymatic . (cell line) | DRR000557(DRX000315) "THP-1 whole cell RNA, after 3 day treatment . (cell line) | GSM359180(GSM359180) hela_phil_smrna_cyto. (hela) | SRR330862(SRX091700) tissue: skin psoriatic involveddisease state:. (skin) | SRR343335 | SRR060169(GSM565979) 5-8F_cytoplasm. (cell line) | SRR189781(GSM714641) cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .........................................................................................................................................TTTATTTTTGGTATATTTG.............................................................................................. | 19 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | |
| ...............................................................................................AAAGGAATTGTAAGAGAA......................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................GTCAAAGTTACTGGAATTGTCCTAT............................................................................................................................................................................. | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - |
| .........................................CCAGAAACAGAATAGTGG............................................................................................................................................................................................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| .........................................................................................................TAAGAGCTACTATCTTAAAT............................................................................................................................. | 20 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .............................................................................................CAAAAGGAATTGTAAGAGCTT........................................................................................................................................ | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | |
| ....................................................................................................................................................................................................ATAGATCGTCTTATTCCCG................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................TTAAGAGATACTGCCGG.... | 17 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | |
| .............................................................................................................................................................ATTTTTAATTTCCCCCTTTT......................................................................... | 20 | 4 | 0.75 | 0.75 | - | - | - | - | - | - | - | - | - | - | 0.75 | - | - | - | - | - | - | - | - | - |