ID: uc011dne.1_intron_5_0_chr6_31113080_r
GENE: (11)
chr6:31113030-31113274-


(2)
B-CELL
(1)
BRAIN
(1)
BREAST
(5)
CELL-LINE
(1)
OTHER
(11)
SKIN

Sense strand
CCAGGCCTGATTGCTCGAAAGCTTGCCCTTGCTCAGCTGCGCCAGGAGAGGTGAAGTTTGGGCACTTTGAGGTGGATGGGGCTTTAGGGCATTGGCTGCTGGGACCCCCAAAACCATGAGGACTGAGGTGGGATGGGGGCTTTGGGATCAGGCAGCTGGGTGATTTCTTCTGACTCTTTCTCTTCCCCGTCCCAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGT
.................................................................................................................((....)).......(((((((((((....((((...(((((..(((....)))..))).))...)))).)))))))))))...................................................
...............................................................................................................112................................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
....................................................................................................................TGAGGACTGAGGTGGAGAA..............................................................................................................1959.000.0059.00--------------------
....................................................................................................................TGAGGACTGAGGTGGAGA...............................................................................................................1841.000.0041.00--------------------
...............CGAAAGCTTGCCCTTGCTCAGC................................................................................................................................................................................................................2213.003.00-3.00-------------------
.............................................................................................................................................................................CTCTTTCTCTTCCCCGCTCC....................................................203.000.00--------1.00-1.00----1.00-----
..............................................................................................................................................................................TCTTTCTCTTCCCCGCTCC....................................................192.000.00----1.00-1.00--------------
..........................................CAGGAGAGGTGAAGTTTGAAG......................................................................................................................................................................................212.000.00--2.00------------------
.................................CAGCTGCGCCAGGAGAG...................................................................................................................................................................................................1721.501.50-----------------1.00--0.50
................................................................................................................................TGGGATGGGGGCTTTGGAGT.................................................................................................201.000.00-----------1.00---------
.........................CCCTTGCTCAGCTGCGCCA.........................................................................................................................................................................................................1911.001.00------------------1.00--
..........................................................................................................................................................................TGACTCTTTCTCTTCCCCGTCTCA...................................................241.000.00-----1.00---------------
..............................................................................................................................................................................TCTTTCTCTTCCCCGCTC.....................................................181.000.00------------1.00--------
.............................................................................................................................................................................CTCTTTCTCTTCCCCGCTC.....................................................191.000.00---1.00-----------------
......................................................................................................................AGGACTGAGGTGGGACCA.............................................................................................................181.000.00----------------1.00----

Antisense strand
CCAGGCCTGATTGCTCGAAAGCTTGCCCTTGCTCAGCTGCGCCAGGAGAGGTGAAGTTTGGGCACTTTGAGGTGGATGGGGCTTTAGGGCATTGGCTGCTGGGACCCCCAAAACCATGAGGACTGAGGTGGGATGGGGGCTTTGGGATCAGGCAGCTGGGTGATTTCTTCTGACTCTTTCTCTTCCCCGTCCCAGCTGTCCCCTACCACCACCGGTCACAGACGTGAGCCTTGAGTTGCAGCAGT
.................................................................................................................((....)).......(((((((((((....((((...(((((..(((....)))..))).))...)))).)))))))))))...................................................
...............................................................................................................112................................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR037935(GSM510473)
293cand3. (cell line)
SRR015359(GSM380324)
Germinal Center B cell (GC136). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577590(Rovira)
total RNA. (breast)
SRR033715(GSM497060)
Mantle Cell Lymphoma (Mino122). (B cell)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
GSM450605(GSM450605)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
..................................................................................................................................................................................TCTCTTCCCCGTCCCAC.................................................. 171.000.00-------1.00-------------
...................................................................................................................................................................................CTGGGACGGGGAAGAG.................................................. 1611.001.00-------------------1.00-
...................................CACCTCTCCTGGCGCAGC................................................................................................................................................................................................ 1811.001.00---------1.00-----------
...................................................................................................................................................................................CTCTTCCCCGTCCCACATA............................................... 191.000.00--------------1.00------
............GCAAGGGCAAGCTTTCGAGC..................................................................................................................................................................................................................... 2011.001.00---1.00-----------------
............................................................................................................................................................................................GTCCCAGCTGTCCCCAAT....................................... 181.000.00-------------1.00-------