ID: uc010ytn.1_intron_2_0_chr2_87016557_r
GENE: (4)
chr2:87016507-87016812-


(2)
AGO2.ip
(1)
B-CELL
(1)
BRAIN
(20)
BREAST
(17)
CELL-LINE
(15)
CERVIX
(1)
FIBROBLAST
(8)
HEART
(1)
HELA
(3)
LIVER
(2)
OTHER
(63)
SKIN
(1)
TESTES
(1)
UTERUS
(1)
XRN.ip

Sense strand
GCCCCTGTCCCTGCGCCCAGAGGCGTGCCGGCCAGCGGCGGGGGGCGCAGGTGAGGCGTGCGGGGGCCCGGGGCGGGGGCGGCACGCACCGCGGGGAGAGCCCATGCCAGGGACAGCCCTGATACTGTAGGTAGAGTCAAGGGCTGTCCAAGTGGTGGGAAACCGAGATCTGAGGCGGAGAGACGTTCCCGGGACGGTGGGGCGGTTGGGAGGTCCCGGGCCCTCTCCTAAATGTCGGCGTCTTTGGTGTCGTCAGTGCACACGAGGGGGCTGGACTTCGCCTGTGATATCTACATCTGGGCGCCC
............................................................(((((((((((.((((..(((...))).))))((((((.((((..(((..(((((((((((((.(((....))).)))).))))))))).((...(((....)))....))..))).....(((.(((((((..((......)).))))))))))..)))).))))))......)))).)))))))............................................................
.........................................................58.............................................................................................................................................................................................249.......................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532890(GSM532890)
G576T. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
SRR040040(GSM532925)
G612N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
..............................................................GGGGCCCGGGGCGGGGT...................................................................................................................................................................................................................................172022.000.001913.009.007.008.002.00-3.00-6.001.003.002.00-5.003.004.001.003.004.003.003.001.002.00---2.002.002.002.001.00---1.001.003.002.00--1.00--------1.00-2.001.00-1.002.00-1.00-------1.00-------1.00----1.001.00----1.00-------------1.00---------1.00--1.00--1.001.001.00---1.00-1.001.00------------
..............................................................GGGGCCCGGGGCGGGGTC..................................................................................................................................................................................................................................1887.000.0014.009.001.00-5.004.001.00--2.001.002.003.00-1.001.00---1.001.00-1.001.00-2.001.001.00-1.001.002.002.00-----1.001.00-2.001.001.002.00--1.00-1.00---1.00---1.00--2.001.00----1.00--------1.00-----------1.00-1.00------1.001.00---1.00-1.001.001.00------------1.001.00----1.00--1.00--------
.............................................................GGGGGCCCGGGGCGGGGT...................................................................................................................................................................................................................................18448.0017.2535.00------7.00----1.00----------------------------------------------2.00---1.00------------------1.00------------------------1.00----------------------------
..............................................................GGGGCCCGGGGCGGGGTCCG................................................................................................................................................................................................................................2045.000.001.001.009.00-2.001.003.00-1.00--1.001.00-1.00-2.002.00---3.00-1.00-1.00----1.00---1.001.00-1.001.00---1.00---------1.001.001.00---------2.00----------------1.00-----------1.001.00----------------------1.00------------------
..............................................................GGGGCCCGGGGCGGGGG...................................................................................................................................................................................................................................17842.7542.7541.75--0.25----0.12----0.12----0.38-------------------------------------------------------------------------------------------------------------------0.12-
..............................................................GGGGCCCGGGGCGGGGTCC.................................................................................................................................................................................................................................1939.000.001.00----4.002.00---2.001.00----2.00-----1.002.00----1.00--1.00--1.00---1.001.001.00--1.00---1.001.00-2.00-----2.00-2.00--1.002.00------1.00------------------1.00---1.00-------1.00--------1.00------------------1.00-------
.............................................................GGGGGCCCGGGGCGGGG....................................................................................................................................................................................................................................17417.2517.2515.50--0.50--------------------------------------0.25----------------------0.75----------------------------------------------------------------0.25-----
..............................................................GGGGCCCGGGGCGGGGTA..................................................................................................................................................................................................................................1811.000.0011.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGGGG...................................................................................................................................................................................................................................1839.679.679.33------0.33--------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTT..................................................................................................................................................................................................................................187.000.002.002.00-1.00-------------------------------------------------------------------------1.00------------------------------------------------1.00---------
...............................................................GGGCCCGGGGCGGGG....................................................................................................................................................................................................................................1507.007.00---------3.00--------------------------------------------------------------1.00-------------1.00---1.00---------------1.00-----------------------------
.............................................................GGGGGCCCGGGGCGGGGA...................................................................................................................................................................................................................................1846.0017.256.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................GCGGGGGCGGCACGCGC.........................................................................................................................................................................................................................176.000.00------------------------4.00----------------------------------------------1.00-----------1.00----------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTG..................................................................................................................................................................................................................................184.000.003.00----------------------------------------------------------------------------------------------1.00----------------------------------------
.......................................................................GGCGGGGGCGGCACGCGCG........................................................................................................................................................................................................................1923.000.50------------------------------------------------1.00-------------------------1.00-----------------------------------1.00-------------------------
.......................................................................GGCGGGGGCGGCACGCGCGC.......................................................................................................................................................................................................................2021.000.50---------------------------------------------------------------1.00------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTGC.................................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------------------------
...................................CGGCGGGGGGCGCAGGGTCG...........................................................................................................................................................................................................................................................201.000.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................CGGCGGGGGGCGCAGGTGGGC..........................................................................................................................................................................................................................................................211.000.00-------------------------------------------------------------------------------------------------------------------------1.00--------------
........................................................................GCGGGGGCGGCACGCGCGC.......................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------1.00-------------------------------------------------------
................................CAGCGGCGGGGGGCGCCCGA..............................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------------------------------------------------1.00------------------------------------
..............................................................GGGGCCCGGGGCGGGGTTGT................................................................................................................................................................................................................................201.000.00---1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGAGT...................................................................................................................................................................................................................................181.000.001.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................TGCGGGGGCCCGGGGCTCCA....................................................................................................................................................................................................................................201.000.00---------------------------------------------1.00------------------------------------------------------------------------------------------
..................AGAGGCGTGCCGGCCAGGAC............................................................................................................................................................................................................................................................................201.000.00---------------------------------1.00------------------------------------------------------------------------------------------------------
.......................................................................GGCGGGGGCGGCACGCGC.........................................................................................................................................................................................................................1821.000.50----------------------------------------------------------------------1.00-----------------------------------------------------------------
...................................CGGCGGGGGGCGCAGGCTGG...........................................................................................................................................................................................................................................................201.000.00-------------------------------------------------------------------------------------------1.00--------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTCCA................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------------------1.00----------
..............................................................GGGGCCCGGGGCGGG.....................................................................................................................................................................................................................................1501.001.00---------1.00------------------------------------------------------------------------------------------------------------------------------
...................................CGGCGGGGGGCGCAGGGT.............................................................................................................................................................................................................................................................181.000.00----------------------------------------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................TCTCCTAAATGTCGGC...................................................................1611.001.00----------------------------------------------------------------------------1.00-----------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTCA.................................................................................................................................................................................................................................191.000.001.00---------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGTGCG................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------------------------------------------------1.00----------------------
.............................................................GGGGGCCCGGGGCGGGGTC..................................................................................................................................................................................................................................1941.0017.251.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGGGTTCG................................................................................................................................................................................................................................2141.0017.251.00---------------------------------------------------------------------------------------------------------------------------------------
........................................................................GCGGGGGCGGCACGCGCG........................................................................................................................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00--------------------------------------------------
................................................................................................................................................................................................................................CTCCTAAATGTCGGCGTCTTT.............................................................2111.001.00-----------------------------------1.00----------------------------------------------------------------------------------------------------
........................................................CGTGCGGGGGCCCGGT..........................................................................................................................................................................................................................................161.000.00----------------------------------------------------------------------------------------------------------------1.00-----------------------
....................................GGCGGGGGGCGCAGGACT............................................................................................................................................................................................................................................................181.000.001.00---------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................AACCGAGATCTGAGGAAG................................................................................................................................181.000.00---------------------------------------1.00------------------------------------------------------------------------------------------------
............................................................................................GGGGAGAGCCCATGC.......................................................................................................................................................................................................1540.750.75-------------------0.25----------------------0.25-----------------------0.25---------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGC..................................................................................................................................................................................................................................1840.750.750.50---0.25-----------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGGGGC..................................................................................................................................................................................................................................1920.500.500.50---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................GGCGGGGGCGGCACGC...........................................................................................................................................................................................................................1620.500.50-------------------------0.50--------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGG.....................................................................................................................................................................................................................................1660.500.50-------------------------------------------------------------------0.170.17----------------------------------------------------------------0.17--
.............................................................GGGGGCCCGGGGCGGGGGCGG................................................................................................................................................................................................................................2120.500.500.50---------------------------------------------------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGGGGCG.................................................................................................................................................................................................................................2020.500.50---0.50------------------------------------------------------------------------------------------------------------------------------------
............................................................CGGGGGCCCGGGGCGGG.....................................................................................................................................................................................................................................1730.330.33----------------------------------------0.33-----------------------------------------------------------------------------------------------
............................................................CGGGGGCCCGGGGCGGGG....................................................................................................................................................................................................................................1830.330.33------------0.33---------------------------------------------------------------------------------------------------------------------------
............................................................................................GGGGAGAGCCCATGCTTC....................................................................................................................................................................................................1840.250.75---------------------------------------------------------------------------------------------------------------------------------0.25------
..............................................................GGGGCCCGGGGCGGGGGCCGC...............................................................................................................................................................................................................................2140.250.75-------------------------------------------0.25--------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGCCTT...............................................................................................................................................................................................................................2140.250.750.25---------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGCCGG...............................................................................................................................................................................................................................2140.250.75-----------------------------------------0.25----------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGCCGCC..............................................................................................................................................................................................................................2240.250.75--------------------------------------------0.25-------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGCAT................................................................................................................................................................................................................................2040.250.750.25---------------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGGCCCGGGGCGGGGGCCGGC..............................................................................................................................................................................................................................2240.250.75-----------------------------------------0.25----------------------------------------------------------------------------------------------
.......................................................................GGCGGGGGCGGCACG............................................................................................................................................................................................................................1590.220.22-----------------------------------------------------------------------------------------------------------------------------------0.22----
.................................................................GCCCGGGGCGGGGGCGGC...............................................................................................................................................................................................................................1850.200.20----------------------------------------0.20-----------------------------------------------------------------------------------------------
.............................................................GGGGGCCCGGGGCGGGCA...................................................................................................................................................................................................................................1860.170.500.17---------------------------------------------------------------------------------------------------------------------------------------
...........................................................GCGGGGGCCCGGGGCGG......................................................................................................................................................................................................................................1760.170.17------------------------------------------------------------------------------------------------------------------------------------0.17---
.............................................................GGGGGCCCGGGGCGGGTG...................................................................................................................................................................................................................................1860.170.500.17---------------------------------------------------------------------------------------------------------------------------------------
..................................................................CCCGGGGCGGGGGCGGC...............................................................................................................................................................................................................................1780.120.12---------------------------------------------------------------------0.12------------------------------------------------------------------
.....................................GCGGGGGGCGCAGGT..............................................................................................................................................................................................................................................................1590.110.11---------------------------------------------------------------------------------------------------------------------------------------0.11
.....................................GCGGGGGGCGCAGGTTCGG..........................................................................................................................................................................................................................................................1990.110.11---------------------------------------------0.11------------------------------------------------------------------------------------------

Antisense strand
GCCCCTGTCCCTGCGCCCAGAGGCGTGCCGGCCAGCGGCGGGGGGCGCAGGTGAGGCGTGCGGGGGCCCGGGGCGGGGGCGGCACGCACCGCGGGGAGAGCCCATGCCAGGGACAGCCCTGATACTGTAGGTAGAGTCAAGGGCTGTCCAAGTGGTGGGAAACCGAGATCTGAGGCGGAGAGACGTTCCCGGGACGGTGGGGCGGTTGGGAGGTCCCGGGCCCTCTCCTAAATGTCGGCGTCTTTGGTGTCGTCAGTGCACACGAGGGGGCTGGACTTCGCCTGTGATATCTACATCTGGGCGCCC
............................................................(((((((((((.((((..(((...))).))))((((((.((((..(((..(((((((((((((.(((....))).)))).))))))))).((...(((....)))....))..))).....(((.(((((((..((......)).))))))))))..)))).))))))......)))).)))))))............................................................
.........................................................58.............................................................................................................................................................................................249.......................................................
SizePerfect hitTotal NormPerfect NormGSM532876(GSM532876)
G547T. (cervix)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532880(GSM532880)
G659T. (cervix)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR040037(GSM532922)
G243T. (cervix)
GSM532874(GSM532874)
G699T. (cervix)
DRR000559(DRX000317)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532890(GSM532890)
G576T. (cervix)
SRR330867(SRX091705)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
GSM532886(GSM532886)
G850T. (cervix)
SRR553576(SRX182782)
source: Testis. (testes)
SRR444049(SRX128897)
Sample 9cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR444043(SRX128891)
Sample 4cDNABarcode: AF-PP-339: ACG CTC TTC C. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330914(SRX091752)
tissue: normal skindisease state: normal. (skin)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330864(SRX091702)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR189784RoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR444058(SRX128906)
Sample 16cDNABarcode: AF-PP-335: ACG CTC TTC . (skin)
SRR330898(SRX091736)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330923(SRX091761)
tissue: normal skindisease state: normal. (skin)
SRR191589(GSM715699)
69genomic small RNA (size selected RNA from t. (breast)
SRR191621(GSM715731)
16genomic small RNA (size selected RNA from t. (breast)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR040031(GSM532916)
G013T. (cervix)
SRR040039(GSM532924)
G531T. (cervix)
SRR191548(GSM715658)
101genomic small RNA (size selected RNA from . (breast)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR330893(SRX091731)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR390724(GSM850203)
small rna immunoprecipitated. (cell line)
SRR191436(GSM715546)
173genomic small RNA (size selected RNA from . (breast)
SRR040040(GSM532925)
G612N. (cervix)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330857(SRX091695)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR040028(GSM532913)
G026N. (cervix)
SRR191592(GSM715702)
59genomic small RNA (size selected RNA from t. (breast)
SRR040011(GSM532896)
G529T. (cervix)
SRR444059(SRX128907)
Sample 17cDNABarcode: AF-PP-339: ACG CTC TTC . (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040016(GSM532901)
G645N. (cervix)
DRR000556(DRX000314)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
DRR000558(DRX000316)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR189782SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
SRR029128(GSM416757)
H520. (cell line)
SRR330875(SRX091713)
tissue: skin psoriatic involveddisease state:. (skin)
SRR040007(GSM532892)
G601T. (cervix)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039636(GSM518473)
THP1_cyto_sRNAs. (cell line)
SRR191549(GSM715659)
105genomic small RNA (size selected RNA from . (breast)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
TAX577741(Rovira)
total RNA. (breast)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
SRR444052(SRX128900)
Sample 12cDNABarcode: AF-PP-340: ACG CTC TTC . (skin)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
TAX577742(Rovira)
total RNA. (breast)
SRR390723(GSM850202)
total small RNA. (cell line)
SRR040038(GSM532923)
G531N. (cervix)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR191440(GSM715550)
26genomic small RNA (size selected RNA from t. (breast)
SRR040032(GSM532917)
G603N. (cervix)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR444053(SRX128901)
Sample 13cDNABarcode: AF-PP-341: ACG CTC TTC . (skin)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR191582(GSM715692)
95genomic small RNA (size selected RNA from t. (breast)
SRR342897(SRX096793)
small RNA seq of Left atrial tissue. (heart)
GSM956925Ago2PAZ(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR191584(GSM715694)
98genomic small RNA (size selected RNA from t. (breast)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR191601(GSM715711)
58genomic small RNA (size selected RNA from t. (breast)
GSM956925Paz8D5(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (cell line)
SRR330876(SRX091714)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
TAX577745(Rovira)
total RNA. (breast)
SRR039637(GSM518474)
THP1_total_sRNAs. (cell line)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577743(Rovira)
total RNA. (breast)
SRR029124(GSM416753)
HeLa. (hela)
SRR363674(GSM830251)
cell type: human foreskin fibroblasts (HFF)tr. (fibroblast)
SRR444041(SRX128889)
Sample 2cDNABarcode: AF-PP-334: ACG CTC TTC C. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR444045(SRX128893)
Sample 6cDNABarcode: AF-PP-341: ACG CTC TTC C. (skin)
SRR191630(GSM715740)
70genomic small RNA (size selected RNA from t. (breast)
SRR189777(GSM714637)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
....................................................................................................................................................................................................GTGGGGCGGTTGGGAGACC........................................................................................... 191.000.00---------------------------------1.00------------------------------------------------------------------------------------------------------
...............................................................GGGCCCGGGGCGGGGGCGGGG.............................................................................................................................................................................................................................. 211.000.00--------------------------------------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................GCCTGTGATATCTACATCAG....... 201.000.00---------------------------------------------1.00------------------------------------------------------------------------------------------
...............................................................................CCGCGGTGCGTGCCG.................................................................................................................................................................................................................... 1521.001.00------------------------------------------------------------------------------------------------------1.00---------------------------------
............................................................CGGGGGCCCGGGGCGGGGGGG................................................................................................................................................................................................................................. 2131.000.00--------------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................GCGGGGAGAGCCCATC........................................................................................................................................................................................................ 161.000.00---------------------------------1.00------------------------------------------------------------------------------------------------------
.................................................................GCCCGGGGCGGGGGCGGT............................................................................................................................................................................................................................... 181.000.00-------------------------------------------------------------------1.00--------------------------------------------------------------------