ID: uc010wnm.1_intron_0_0_chr17_55333343_f.5p
GENE: MSI2(1)
chr17:55333293-55333542+


(2)
AGO2.ip
(7)
B-CELL
(4)
BRAIN
(23)
BREAST
(20)
CELL-LINE
(6)
CERVIX
(8)
HEART
(3)
HELA
(12)
LIVER
(3)
OTHER
(1)
RRP40.ip
(53)
SKIN
(1)
TESTES
(2)
UTERUS
(1)
XRN.ip

Sense strand
AGCCCCCCGATCCTGGGGCGTCTCGGGGGCCGCCAAAGGAGCGCCAGGGTGTGGGTTTGCTCCCGACGTCCTTGACCTAAATTTCTGAGCGGTGGCTGGAAACAGGGCACAGCGGAGGGCGGGCGGCTGGTGCCATTCCCGGATCTCGGCGGCAGGGGCCGGCAAACTTGAATGGAGAGGGCGAACTAGAGAGGGTGGGGGGCGTCTTCTCCCAGGTCCGGGTGAGGAGCCGCAGCAAGCTCCCCGCGCC
.....................................................................................((..((((..(((....))).((...((.((((.((((.(((....)))...))))..)))).)).))....)))).))......................................................................................
....................................................................................85....................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040029(GSM532914)
G026T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
...................................................................................................................................................GGCGGCAGGGGCCGGCGGCG...................................................................................204238.502.50224.250.25-0.250.50----0.50-----0.750.250.250.250.750.250.750.500.250.250.250.250.250.250.25-----0.25---------------------0.250.500.250.25-0.750.25--------0.250.250.25----0.250.500.50-0.250.25--0.25---0.25--0.25--------0.25--0.250.25------------0.250.25-----0.25---------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGC....................................................................................194208.502.50185.001.75-2.001.25---1.250.250.25---0.500.25-0.250.500.25-0.25-0.750.250.501.00--0.500.50--0.75-0.25-------0.75------------0.250.25--0.500.75-0.250.500.50--0.250.25----0.250.25-0.25------0.25-0.25-----0.250.25---0.250.25-----0.250.25--0.250.250.250.250.25-0.250.250.250.250.25------0.25----0.250.25-----------
...................................................................................................................................................GGCGGCAGGGGCCGGCGG.....................................................................................18441.752.5036.750.50--0.75---------0.250.25-0.75-0.25--------------0.25---------------------0.25--------0.250.25----0.25-----------------0.25-----------------------------0.25--0.25-0.25------------------
....................................................................................................................................................GCGGCAGGGGCCGGCGGCG...................................................................................19923.440.5615.670.44--0.11----0.330.11---0.11--0.11--0.110.44---0.220.110.110.22-0.22--0.110.110.33--------------------0.110.220.440.11------0.110.22-0.11-0.11-0.11-0.110.33---------0.220.22--0.110.11-0.11----0.110.330.33-------------------------------0.220.11-0.110.11-0.110.110.110.11-
...................................................................................................................................................GGCGGCAGGGGCCGGCG......................................................................................17417.002.506.250.50-0.500.50---0.25-0.75---0.500.25-------0.25----0.50-0.50--0.250.75--------0.25------------0.250.25-0.50---0.250.25-0.250.250.25-------------0.250.25-0.50--0.25-0.25-----0.25----------------0.25---------0.25----0.250.25-------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGGG...................................................................................2049.502.508.00------------------0.250.25---------------------------------------------------0.250.25----------------------------0.25-----------------------0.25----------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGG....................................................................................1947.002.505.25---------------0.25--------0.25---------0.25-----------------------------------0.25-----0.25-0.25--0.25------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGG........................................................................................1592.672.67-0.11-0.330.11---------0.110.22-0.22----------0.33--0.110.11-----------------------0.11---------0.11-0.22-----0.11-------------0.11---0.11---0.110.11---------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGC.......................................................................................1642.502.50---0.50-----------0.250.250.25-----0.25-----0.50-------------------------------------0.25---------------------------0.25-----------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGCC...................................................................................2042.252.502.25----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................CGGTGGCTGGAAACAGGGCA.............................................................................................................................................2012.002.00-----------2.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................CCAGGTCCGGGTGAGGAGCC...................2012.002.00------------2.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................AGCGGAGGGCGGGCGCCGG.........................................................................................................................191.000.00-------------------------------------1.00---------------------------------------------------------------------------------------------------------
........................................................................................GCGGTGGCTGGAAACTCTG...............................................................................................................................................191.000.00--------------------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCAA.....................................................................................1811.001.00----------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................TCTGAGCGGTGGCTGAC......................................................................................................................................................171.000.00------------------------------------------------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................AGGGGCCGGCAAACTGT................................................................................171.000.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCAGC....................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................GGGCACAGCGGAGGGCGGGCGGC...........................................................................................................................2311.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGATC...................................................................................2041.002.50----------------------------------------------1.00------------------------------------------------------------------------------------------------
.........................................................................................CGGTGGCTGGAAACAGGGCACAGCGGAG.....................................................................................................................................2811.001.00------------------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................................GTGGGGGGCGTCTTCTTT......................................181.000.00------------------------------------1.00----------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACTTGAATGGAGAGGGCGAACTA..............................................................2311.001.00-------------------------------------------------------1.00---------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TCCGGGTGAGGAGCCGCA................1811.001.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CCCAGGTCCGGGTGAGGAGCC...................2111.001.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------
............................................................................................................................................................................................GAGAGGGTGGGGGGCTCG............................................181.000.00---------------------------------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................TGAATGGAGAGGGCGAACT...............................................................1911.001.00--------------------------------------------------1.00--------------------------------------------------------------------------------------------
...........................................................................................................................................................................................AGAGAGGGTGGGGGGGGGC............................................191.000.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GCCGCAGCAAGCTCCGT.....171.000.00------------------------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................CGGCAGGGGCCGGCAGCGG..................................................................................191.000.001.00----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCCGCG...................................................................................2040.752.500.75----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGC.......................................................................................1590.560.56------------------------------------------------------------0.11--------------0.11------------0.11------0.11----------------------------------------------0.11
....................................................................................................................................................GCGGCAGGGGCCGGCGGG....................................................................................1890.560.560.11------------------------0.22--------------------------------------------------0.22------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCGGGG...................................................................................1990.560.560.22--------------------0.11----------------------------------------------------------------------------------------------------------------0.11--0.11-----
...................................................................................................................................................GGCGGCAGGGGCCGGCCGC....................................................................................1940.502.500.50----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGCGGCAGGGGCCGGCGG.....................................................................................1920.500.50--------------0.50--------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGCGGCAGGGGCCG.........................................................................................1560.500.50----------------0.17-----------------------------------------------------0.17------------------0.17-----------------------------------------------------
............................................CAGGGTGTGGGTTTGCT.............................................................................................................................................................................................1720.500.50------------------------------------------------------------------------------0.50----------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGA....................................................................................1940.502.500.50----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................CGGCGGCAGGGGCCGGC.......................................................................................1720.500.50----------------------------------------------------------------------0.50------------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCGGCC...................................................................................1990.330.560.11--------0.11-----------------------------------------------------------------0.11-------------------------------------------------------------------
..................................................................................................................................................CGGCGGCAGGGGCCGG........................................................................................1630.330.33---------------------------------------------------------------------0.33-------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCCGG....................................................................................1940.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCTGG....................................................................................1940.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGT....................................................................................1940.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCTGC....................................................................................1940.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGGC...................................................................................2040.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGGCA...................................................................................2040.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCCGTG...................................................................................2040.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGCGCCG...................................................................................2040.252.500.25----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCCGCG...................................................................................1990.220.560.11-----------------------------------------------------------------------0.11----------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCTGC....................................................................................1890.110.56----------------------------------------------------------------------------------------------0.11------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCCGCT...................................................................................1990.110.560.11----------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................GCGGCAGGGGCCGGCGGCA...................................................................................1990.110.56-------------------0.11---------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................GGCGGCAGGGGCCGGTGGG....................................................................................1990.112.670.11----------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
AGCCCCCCGATCCTGGGGCGTCTCGGGGGCCGCCAAAGGAGCGCCAGGGTGTGGGTTTGCTCCCGACGTCCTTGACCTAAATTTCTGAGCGGTGGCTGGAAACAGGGCACAGCGGAGGGCGGGCGGCTGGTGCCATTCCCGGATCTCGGCGGCAGGGGCCGGCAAACTTGAATGGAGAGGGCGAACTAGAGAGGGTGGGGGGCGTCTTCTCCCAGGTCCGGGTGAGGAGCCGCAGCAAGCTCCCCGCGCC
.....................................................................................((..((((..(((....))).((...((.((((.((((.(((....)))...))))..)))).)).))....)))).))......................................................................................
....................................................................................85....................................................................................171.............................................................................
SizePerfect hitTotal NormPerfect NormRoviraIPAgo2(Rovira)
total RNA. (ago2 breast)
SRR330895(SRX091733)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR207110(GSM721072)
Nuclear RNA. (cell line)
SRR330905(SRX091743)
tissue: normal skindisease state: normal. (skin)
SRR330897(SRX091735)
tissue: skin psoriatic uninvolveddisease stat. (skin)
DRR001488(DRX001042)
"Hela short nuclear cell fraction, LNA(+)". (hela)
SRR060983(GSM569187)
Human pre-germinal center B cell [09-001]. (cell line)
SRR060984(GSM569188)
Human plasma cell [09-001]. (cell line)
SRR330889(SRX091727)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577589(Rovira)
total RNA. (breast)
TAX577579(Rovira)
total RNA. (breast)
SRR033718(GSM497063)
Multiple Myeloma (U266). (B cell)
SRR029124(GSM416753)
HeLa. (hela)
SRR342898(SRX096794)
small RNA seq of Right atrial tissue. (heart)
SRR330894(SRX091732)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330860(SRX091698)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330880(SRX091718)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330892(SRX091730)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330917(SRX091755)
tissue: normal skindisease state: normal. (skin)
TAX577738(Rovira)
total RNA. (breast)
TAX577453(Rovira)
total RNA. (breast)
SRR033727(GSM497072)
HIV-positive DL (HIV412). (B cell)
SRR039190(GSM494809)
PBMCs were isolated by ficoll gradient from t. (blood)
SRR330904(SRX091742)
tissue: normal skindisease state: normal. (skin)
TAX577745(Rovira)
total RNA. (breast)
SRR039623(GSM531986)
HCV(+) HCC Tissue Sample. (liver)
SRR330913(SRX091751)
tissue: normal skindisease state: normal. (skin)
SRR033710(GSM497055)
GCB DLBCL (GCB385). (B cell)
SRR330874(SRX091712)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330869(SRX091707)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577744(Rovira)
total RNA. (breast)
SRR342899(SRX096795)
small RNA seq of Left atrial tissue. (heart)
SRR342894(SRX096790)
small RNA seq of Right atrial tissue. (heart)
SRR330891(SRX091729)
tissue: skin psoriatic uninvolveddisease stat. (skin)
TAX577740(Rovira)
total RNA. (breast)
TAX577743(Rovira)
total RNA. (breast)
SRR189784SRR029054(GSM402329)
MCF7_smallRNAseq. (cell line)
DRR000555(DRX000313)
"THP-1 whole cell RNA, no treatment". (cell line)
SRR040029(GSM532914)
G026T. (cervix)
DRR000557(DRX000315)
"THP-1 whole cell RNA, after 3 day treatment . (cell line)
SRR207112(GSM721074)
RRP40 knockdown. (RRP40 cell line)
SRR342901(SRX096797)
small RNA seq of Left atrial tissue. (heart)
SRR330885(SRX091723)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM450609(GSM450609)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR040009(GSM532894)
G727T. (cervix)
SRR314796(SRX084354)
"Total RNA, fractionated (15-30nt)". (cell line)
SRR060982(GSM569186)
Human centrocyte [09-001]. (cell line)
SRR189779(GSM714639)
cell line: HEK293clip variant: PAR-CLIPenzyma. (cell line)
GSM450610(GSM450610)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR207115(GSM721077)
XRN1&2 knockdown. (XRN1/XRN2 cell line)
SRR330868(SRX091706)
tissue: skin psoriatic involveddisease state:. (skin)
SRR342900(SRX096796)
small RNA seq of Right atrial tissue. (heart)
SRR038860(GSM458543)
MM426. (cell line)
SRR326280(GSM769510)
total cell content of unperturbed cells was s. (cell line)
SRR060981(GSM569185)
Human centroblast [09-001]. (cell line)
SRR330883(SRX091721)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330911(SRX091749)
tissue: normal skindisease state: normal. (skin)
SRR033728(GSM497073)
MALT (MALT413). (B cell)
SRR330922(SRX091760)
tissue: normal skindisease state: normal. (skin)
SRR330861(SRX091699)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330872(SRX091710)
tissue: skin psoriatic involveddisease state:. (skin)
TAX577746(Rovira)
total RNA. (breast)
TAX577739(Rovira)
total RNA. (breast)
SRR330901(SRX091739)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330916(SRX091754)
tissue: normal skindisease state: normal. (skin)
SRR330907(SRX091745)
tissue: normal skindisease state: normal. (skin)
SRR330865(SRX091703)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330884(SRX091722)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330896(SRX091734)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR095854(SRX039177)
"miRNA were isolated from FirstChoice Human B. (brain)
SRR040028(GSM532913)
G026N. (cervix)
SRR039612(GSM531975)
Human Normal Liver Tissue Sample 2. (liver)
SRR039622(GSM531985)
HCV(+) Adjacent Tissue Sample. (liver)
SRR330878(SRX091716)
tissue: skin psoriatic involveddisease state:. (skin)
SRR553572(SRX182778)
source: Frontal Cortex. (Frontal Cortex)
SRR039624(GSM531987)
HBV(-) HCV(-) Adjacent Tissue Sample. (liver)
SRR033712(GSM497057)
Burkitt Lymphoma (BL510). (B cell)
TAX577580(Rovira)
total RNA. (breast)
TAX577588(Rovira)
total RNA. (breast)
SRR330906(SRX091744)
tissue: normal skindisease state: normal. (skin)
SRR191554(GSM715664)
99genomic small RNA (size selected RNA from t. (breast)
SRR326279(GSM769509)
cytoplasmic fraction was isolated using PARIS. (cell line)
SRR330871(SRX091709)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330915(SRX091753)
tissue: normal skindisease state: normal. (skin)
SRR326281(GSM769511)
"Dicer mRNA was knocked down using siDicer, c. (cell line)
SRR039616(GSM531979)
HBV(+) Distal Tissue Sample 1. (liver)
TAX577742(Rovira)
total RNA. (breast)
SRR553576(SRX182782)
source: Testis. (testes)
SRR330902(SRX091740)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330921(SRX091759)
tissue: normal skindisease state: normal. (skin)
SRR330912(SRX091750)
tissue: normal skindisease state: normal. (skin)
SRR330908(SRX091746)
tissue: normal skindisease state: normal. (skin)
SRR330888(SRX091726)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR039617(GSM531980)
HBV(+) Adjacent Tissue Sample 1. (liver)
SRR330919(SRX091757)
tissue: normal skindisease state: normal. (skin)
SRR330862(SRX091700)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330877(SRX091715)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039619(GSM531982)
HBV(+) HCC Tissue Sample 1. (liver)
SRR039614(GSM531977)
HBV-infected Liver Tissue. (liver)
SRR330899(SRX091737)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR342895(SRX096791)
small RNA seq of Left atrial tissue. (heart)
SRR039621(GSM531984)
HBV(+) HCC Tissue Sample 2. (liver)
SRR330873(SRX091711)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330879(SRX091717)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330900(SRX091738)
tissue: skin psoriatic uninvolveddisease stat. (skin)
GSM532876(GSM532876)
G547T. (cervix)
SRR330881(SRX091719)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191421(GSM715531)
122genomic small RNA (size selected RNA from . (breast)
SRR330882(SRX091720)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330863(SRX091701)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330890(SRX091728)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR330903(SRX091741)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR191588(GSM715698)
52genomic small RNA (size selected RNA from t. (breast)
SRR553573(SRX182779)
source: Cerebellum. (Cerebellum)
SRR191606(GSM715716)
84genomic small RNA (size selected RNA from t. (breast)
SRR040036(GSM532921)
G243N. (cervix)
SRR191467(GSM715577)
115genomic small RNA (size selected RNA from . (breast)
SRR191408(GSM715518)
88genomic small RNA (size selected RNA from t. (breast)
SRR191616(GSM715726)
103genomic small RNA (size selected RNA from . (breast)
SRR191406(GSM715516)
67genomic small RNA (size selected RNA from t. (breast)
TAX577590(Rovira)
total RNA. (breast)
DRR001489(DRX001043)
"Hela short nuclear cell fraction, control". (hela)
SRR330918(SRX091756)
tissue: normal skindisease state: normal. (skin)
GSM956925Ago2(GSM956925)
"cell line: HEK293 cell linepassages: 15-20ip. (ago2 cell line)
SRR107296(GSM677703)
18-30nt fraction of small RNA. (cell line)
SRR326282(GSM769512)
"Dicer mRNA was knocked down using siDicer, t. (cell line)
SRR330866(SRX091704)
tissue: skin psoriatic involveddisease state:. (skin)
SRR330920(SRX091758)
tissue: normal skindisease state: normal. (skin)
SRR342896(SRX096792)
small RNA seq of Right atrial tissue. (heart)
SRR033711(GSM497056)
GCB DLBCL (GCB110). (B cell)
SRR330859(SRX091697)
tissue: skin psoriatic involveddisease state:. (skin)
SRR039611(GSM531974)
Human Normal Liver Tissue Sample 1. (liver)
SRR094129(GSM651905)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR039620(GSM531983)
HBV(+) Adjacent Tissue Sample 2. (liver)
SRR033717(GSM497062)
Mentle Cell Lymphoma (MCL112). (B cell)
SRR039618(GSM531981)
HBV(+) Side Tissue Sample 1. (liver)
SRR039192(GSM494811)
K562 cell line is derived from a CML patient . (cell line)
SRR330887(SRX091725)
tissue: skin psoriatic uninvolveddisease stat. (skin)
SRR094132(GSM651908)
small RNA(18-35nt)small RNA deep sequencing o. (uterus)
SRR040039(GSM532924)
G531T. (cervix)
GSM450608(GSM450608)
miRNA sequencing raw reads from post-mortem s. (brain)
SRR553574(SRX182780)
source: Heart. (Heart)
...........................................................GTCAAGGACGTCGGGAG.............................................................................................................................................................................. 1713.003.00--3.00--------------------------------------------------------------------------------------------------------------------------------------------
.....................................................AGGACGTCGGGAGCAAACC.................................................................................................................................................................................. 1912.002.00-------------------------------1.00--------1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................ACCCGGACCTGGGAGAAGACG........................... 2112.002.00------2.00----------------------------------------------------------------------------------------------------------------------------------------
..............................................................AATTTAGGTCAAGGACGTCGG....................................................................................................................................................................... 2112.002.00--------------------------------------1.00-------------1.00------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CCCGGACCTGGGAGAAGACGCC............................ 2212.002.00-------2.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................GTCAAGGACGTCGGGAGCAAAC.............................................................................................................................................................................. 2212.002.00-----2.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................................GGACGTCGGGAGCAAACCC................................................................................................................................................................................... 1911.001.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------
..CCCCCCGATCCTGGGAAT...................................................................................................................................................................................................................................... 181.000.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................GAGAGGGTGGGGGGCGA............................................. 171.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------
.......................................................AAGGACGTCGGGAGCAAA................................................................................................................................................................................. 1811.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CCGGACCTGGGAGAAGACGCC............................. 2111.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................AGAAATTTAGGTCAAGGACG.................................................................................................................................................................... 2011.001.00-------------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CCGGACCTGGGAGAAGACGCCCCCCAC............................. 2711.001.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................GCAGGGGCCGGCAAACTTCT............................................................................... 201.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------
..................................................................CGTCCTTGACCTAAATTTCTGAGCGGA............................................................................................................................................................. 271.000.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................CCGGATCTCGGCGGCC................................................................................................ 161.000.00----------------1.00------------------------------------------------------------------------------------------------------------------------------
...................................................AAGGACGTCGGGAGCAAACCCA................................................................................................................................................................................. 2211.001.00------------------1.00----------------------------------------------------------------------------------------------------------------------------
........................................................CAAGGACGTCGGGAGCAA................................................................................................................................................................................ 1811.001.00--------------------1.00--------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CCCGGACCTGGGAGAAGACG............................ 2011.001.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................GGCAGGGGCCGGCAAACCA................................................................................. 191.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------
.........................................................GTCAAGGACGTCGGGAGCA.............................................................................................................................................................................. 1911.001.00------------------------------------------1.00----------------------------------------------------------------------------------------------------
..................................................................GAAATTTAGGTCAAGGACG..................................................................................................................................................................... 1911.001.00-----------------------------------------------------1.00-----------------------------------------------------------------------------------------
................................................................AATTTAGGTCAAGGACGTC....................................................................................................................................................................... 1911.001.00-----------------------------------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................GGACCTGGGAGAAGACGCC............................... 1930.330.33-----------------------------------------------------------------------------------------------------0.33-----------------------------------------